Wall clock time and date at job start Mon Mar 8 2021 06:16:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.33326 * 125.95126 * 2 1 4 4 C 1.50701 * 122.71041 * 359.95954 * 3 2 1 5 5 O 1.42903 * 109.46878 * 329.73854 * 4 3 2 6 6 Si 1.86303 * 109.47233 * 209.74083 * 4 3 2 7 7 N 1.32122 * 114.57833 * 179.69775 * 3 2 1 8 8 C 1.29676 * 116.86844 * 0.26396 * 7 3 2 9 9 N 1.38612 * 124.95462 * 180.02562 * 8 7 3 10 10 C 1.46494 * 120.00526 * 179.97438 * 9 8 7 11 11 H 1.09000 * 112.84956 * 336.20368 * 10 9 8 12 12 C 1.53784 * 113.61258 * 107.50250 * 10 9 8 13 13 C 1.53781 * 87.07970 * 89.11873 * 12 10 9 14 14 H 1.09006 * 113.69232 * 270.87104 * 13 12 10 15 15 C 1.50702 * 113.61708 * 139.98090 * 13 12 10 16 16 C 1.38323 * 120.00784 * 142.50076 * 15 13 12 17 17 Cl 1.73605 * 120.01556 * 0.02562 * 16 15 13 18 18 C 1.38380 * 119.97522 * 179.97438 * 16 15 13 19 19 C 1.38189 * 119.98291 * 0.02562 * 18 16 15 20 20 C 1.38260 * 120.01520 * 0.02562 * 19 18 16 21 21 C 1.38226 * 120.02630 * 359.69999 * 20 19 18 22 22 C 1.53783 * 87.08365 * 25.43220 * 13 12 10 23 23 S 1.70972 * 110.10270 * 0.02562 * 8 7 3 24 24 H 1.09002 * 109.47559 * 90.00431 * 1 2 3 25 25 H 1.09003 * 109.47509 * 210.00521 * 1 2 3 26 26 H 1.09003 * 109.47432 * 330.00355 * 1 2 3 27 27 H 1.09002 * 109.47060 * 89.73984 * 4 3 2 28 28 H 0.96700 * 114.00234 * 299.99722 * 5 4 3 29 29 H 1.48502 * 109.99951 * 180.02562 * 6 4 3 30 30 H 1.48507 * 109.99767 * 301.31682 * 6 4 3 31 31 H 0.97003 * 119.99483 * 0.02562 * 9 8 7 32 32 H 1.09003 * 113.61613 * 203.66581 * 12 10 9 33 33 H 1.09001 * 113.61610 * 334.57379 * 12 10 9 34 34 H 1.08000 * 120.00913 * 179.97438 * 18 16 15 35 35 H 1.08004 * 119.99319 * 179.97438 * 19 18 16 36 36 H 1.08002 * 119.98488 * 179.97438 * 20 19 18 37 37 H 1.08001 * 119.99138 * 180.29752 * 21 20 19 38 38 H 1.09000 * 113.61651 * 220.02298 * 22 13 12 39 39 H 1.08998 * 113.68821 * 89.12215 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7413 2.4830 -0.0009 5 8 0.4844 2.5029 -0.6806 6 14 2.9364 3.6161 -0.8720 7 7 3.5849 0.8188 0.0063 8 6 3.9314 -0.4308 0.0064 9 7 5.2383 -0.8926 0.0130 10 6 5.5065 -2.3328 0.0128 11 1 4.6782 -2.9176 0.4130 12 6 6.0432 -2.8593 -1.3287 13 6 7.4520 -2.5431 -0.7994 14 1 7.7857 -1.5293 -1.0208 15 6 8.4787 -3.5877 -1.1540 16 6 9.7684 -3.2078 -1.4788 17 17 10.2052 -1.5276 -1.4775 18 6 10.7108 -4.1676 -1.8038 19 6 10.3627 -5.5049 -1.8042 20 6 9.0731 -5.8840 -1.4805 21 6 8.1329 -4.9261 -1.1502 22 6 6.8714 -2.7054 0.6154 23 16 2.5412 -1.4261 -0.0030 24 1 -0.3634 -0.0001 -1.0277 25 1 -0.3634 -0.8899 0.5139 26 1 -0.3634 0.8900 0.5138 27 1 1.6042 2.8202 1.0266 28 1 0.5311 2.2143 -1.6023 29 1 2.4074 5.0036 -0.8791 30 1 4.2569 3.5799 -0.1936 31 1 5.9754 -0.2620 0.0185 32 1 5.8635 -3.9232 -1.4836 33 1 5.7517 -2.2507 -2.1847 34 1 11.7179 -3.8715 -2.0580 35 1 11.0980 -6.2541 -2.0583 36 1 8.8015 -6.9293 -1.4813 37 1 7.1270 -5.2232 -0.8928 38 1 7.2484 -1.9725 1.3288 39 1 6.9177 -3.7267 0.9932 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10565094_15704122.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:16:21 Heat of formation + Delta-G solvation = 64.445853 kcal Electronic energy + Delta-G solvation = -23553.478569 eV Core-core repulsion = 20002.011034 eV Total energy + Delta-G solvation = -3551.467535 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.064 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.59541 -40.90089 -39.53632 -37.71090 -37.44744 -35.41011 -32.76883 -31.79564 -31.68298 -29.15332 -26.97055 -26.42577 -25.52271 -24.36117 -23.78403 -22.89877 -20.82359 -20.40849 -18.85053 -18.46680 -17.84273 -17.40322 -16.96463 -16.57539 -16.46764 -16.28720 -15.61297 -15.56677 -15.17278 -14.95356 -14.89318 -14.63090 -14.17708 -14.07741 -13.73466 -13.68764 -13.54083 -13.28541 -13.11399 -12.86124 -12.65054 -12.55572 -12.30132 -12.25904 -11.97221 -11.82218 -11.59785 -11.51254 -10.97884 -10.53006 -10.27285 -9.98060 -9.94779 -9.68773 -8.60808 -4.82080 0.04514 0.08127 0.16372 0.20577 0.82295 1.12682 1.41927 1.81000 1.92367 1.97175 2.28061 2.50071 3.17403 3.35925 3.38989 3.44523 3.57297 3.66263 3.76342 3.92266 3.95467 4.16310 4.20602 4.24306 4.31931 4.37919 4.48068 4.55699 4.58248 4.58966 4.73849 4.80112 4.80710 4.83960 4.90493 4.96777 5.16087 5.17041 5.32405 5.34627 5.36491 5.63838 5.71060 6.26158 6.53169 6.99210 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 C -0.238 4.238 3 C 0.066 3.934 4 C -0.033 4.033 5 O -0.536 6.536 6 Si 0.715 3.285 7 N -0.544 5.544 8 C 0.322 3.678 9 N -0.677 5.677 10 C 0.127 3.873 11 H 0.098 0.902 12 C -0.146 4.146 13 C -0.080 4.080 14 H 0.107 0.893 15 C -0.063 4.063 16 C -0.033 4.033 17 Cl -0.066 7.066 18 C -0.108 4.108 19 C -0.110 4.110 20 C -0.112 4.112 21 C -0.106 4.106 22 C -0.131 4.131 23 S 0.100 5.900 24 H 0.071 0.929 25 H 0.058 0.942 26 H 0.091 0.909 27 H 0.120 0.880 28 H 0.379 0.621 29 H -0.262 1.262 30 H -0.252 1.252 31 H 0.413 0.587 32 H 0.100 0.900 33 H 0.081 0.919 34 H 0.134 0.866 35 H 0.132 0.868 36 H 0.130 0.870 37 H 0.133 0.867 38 H 0.082 0.918 39 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.336 -5.611 -2.043 5.981 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.360 4.360 3 C -0.064 4.064 4 C -0.146 4.146 5 O -0.340 6.340 6 Si 0.616 3.384 7 N -0.270 5.270 8 C -0.049 4.049 9 N -0.317 5.317 10 C 0.020 3.980 11 H 0.116 0.884 12 C -0.185 4.185 13 C -0.098 4.098 14 H 0.125 0.875 15 C -0.063 4.063 16 C -0.060 4.060 17 Cl -0.037 7.037 18 C -0.127 4.127 19 C -0.129 4.129 20 C -0.130 4.130 21 C -0.125 4.125 22 C -0.169 4.169 23 S 0.349 5.651 24 H 0.090 0.910 25 H 0.077 0.923 26 H 0.109 0.891 27 H 0.137 0.863 28 H 0.226 0.774 29 H -0.188 1.188 30 H -0.176 1.176 31 H 0.252 0.748 32 H 0.118 0.882 33 H 0.100 0.900 34 H 0.152 0.848 35 H 0.150 0.850 36 H 0.148 0.852 37 H 0.150 0.850 38 H 0.100 0.900 39 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 0.959 -5.402 -1.387 5.659 hybrid contribution 0.174 0.751 0.560 0.953 sum 1.134 -4.652 -0.827 4.859 Atomic orbital electron populations 1.20210 0.86387 1.03128 1.02749 1.25153 1.01333 0.92733 1.16818 1.20125 0.86711 0.97157 1.02398 1.24506 0.92545 0.95550 1.02046 1.86504 1.28954 1.89690 1.28895 0.94092 0.77626 0.76472 0.90238 1.65956 1.17304 1.16662 1.27120 1.23237 0.91625 0.91504 0.98579 1.43585 1.01914 1.06138 1.80032 1.21947 0.98423 0.79955 0.97666 0.88366 1.23678 0.94390 1.02570 0.97849 1.21708 0.92808 0.98517 0.96756 0.87465 1.19522 0.92609 0.94715 0.99487 1.20878 0.94706 0.85574 1.04794 1.98381 1.92737 1.15577 1.97049 1.21119 0.99365 0.92363 0.99826 1.21182 0.96890 0.95364 0.99433 1.21294 0.93288 1.00014 0.98366 1.20993 1.00106 0.91380 0.99977 1.23417 0.93729 1.03554 0.96227 1.83950 0.96498 1.10568 1.74079 0.91012 0.92278 0.89072 0.86286 0.77353 1.18765 1.17635 0.74820 0.88202 0.90035 0.84838 0.84964 0.85184 0.84954 0.89962 0.87858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.01 8.95 36.00 0.32 0.33 16 2 C -0.24 -0.37 6.50 -36.03 -0.23 -0.60 16 3 C 0.07 0.16 5.92 -84.18 -0.50 -0.34 16 4 C -0.03 -0.04 2.82 36.01 0.10 0.06 16 5 O -0.54 -0.10 9.91 -35.23 -0.35 -0.45 16 6 Si 0.71 0.95 32.08 -169.99 -5.45 -4.50 16 7 N -0.54 -1.82 8.95 -11.36 -0.10 -1.92 16 8 C 0.32 0.56 8.24 -87.69 -0.72 -0.16 16 9 N -0.68 0.24 5.42 -54.99 -0.30 -0.06 16 10 C 0.13 -0.29 4.31 -67.12 -0.29 -0.57 16 11 H 0.10 -0.25 7.06 -51.93 -0.37 -0.62 16 12 C -0.15 0.37 7.25 -25.92 -0.19 0.18 16 13 C -0.08 0.14 3.64 -90.96 -0.33 -0.19 16 14 H 0.11 -0.10 6.57 -51.93 -0.34 -0.44 16 15 C -0.06 0.04 5.29 -104.59 -0.55 -0.51 16 16 C -0.03 -0.02 6.31 -39.50 -0.25 -0.27 16 17 Cl -0.07 -0.06 27.16 -51.86 -1.41 -1.47 16 18 C -0.11 0.02 9.83 -39.55 -0.39 -0.37 16 19 C -0.11 0.13 10.04 -39.59 -0.40 -0.27 16 20 C -0.11 0.18 10.05 -39.58 -0.40 -0.22 16 21 C -0.11 0.18 8.60 -39.59 -0.34 -0.16 16 22 C -0.13 0.35 7.29 -25.92 -0.19 0.16 16 23 S 0.10 0.06 21.69 -107.50 -2.33 -2.27 16 24 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 25 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 26 H 0.09 0.05 6.63 -51.93 -0.34 -0.29 16 27 H 0.12 0.21 7.96 -51.93 -0.41 -0.20 16 28 H 0.38 -1.21 8.68 45.56 0.40 -0.81 16 29 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 30 H -0.25 -1.22 7.11 56.52 0.40 -0.82 16 31 H 0.41 -0.23 8.83 -40.82 -0.36 -0.59 16 32 H 0.10 -0.36 6.32 -51.93 -0.33 -0.69 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 34 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 35 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 36 H 0.13 -0.45 8.06 -52.49 -0.42 -0.88 16 37 H 0.13 -0.49 6.67 -52.49 -0.35 -0.84 16 38 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 39 H 0.10 -0.36 7.72 -51.93 -0.40 -0.76 16 LS Contribution 347.67 15.07 5.24 5.24 Total: 0.00 -5.67 347.67 -13.73 -19.40 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -4.67 Total: -11.03 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -4.36 Total: -2.95 kcal Atomic # 7 Polarization: -1.57 SS G_CDS: -0.40 Total: -1.97 kcal Atomic # 8 Polarization: -0.10 SS G_CDS: -0.35 Total: -0.45 kcal Atomic # 14 Polarization: 0.95 SS G_CDS: -5.45 Total: -4.50 kcal Atomic # 16 Polarization: 0.06 SS G_CDS: -2.33 Total: -2.27 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.41 Total: -1.47 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -5.67 -13.73 -19.40 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10565094_15704122.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.846 kcal (2) G-P(sol) polarization free energy of solvation -5.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.400 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds