Wall clock time and date at job start Mon Mar 8 2021 06:12:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35901 * 117.00047 * 2 1 4 4 C 1.38714 * 120.05555 * 180.29406 * 3 2 1 5 5 C 1.38163 * 119.94337 * 180.25983 * 4 3 2 6 6 C 1.50701 * 119.97119 * 179.75133 * 5 4 3 7 7 H 1.09002 * 112.85047 * 350.05480 * 6 5 4 8 8 C 1.53781 * 113.61772 * 121.25195 * 6 5 4 9 9 C 1.53777 * 87.08336 * 140.06093 * 8 6 5 10 10 H 1.08996 * 113.61474 * 220.01758 * 9 8 6 11 11 N 1.46499 * 113.61160 * 89.20358 * 9 8 6 12 12 C 1.38403 * 120.00073 * 154.99945 * 11 9 8 13 13 N 1.32494 * 119.21707 * 359.73104 * 12 11 9 14 14 C 1.32273 * 120.74001 * 179.71574 * 13 12 11 15 15 C 1.38613 * 119.19466 * 0.54753 * 14 13 12 16 16 C 1.50697 * 120.71828 * 179.71061 * 15 14 13 17 17 O 1.42907 * 109.47117 * 245.02040 * 16 15 14 18 18 Si 1.86300 * 109.47445 * 5.01484 * 16 15 14 19 19 C 1.38594 * 118.55990 * 359.72480 * 15 14 13 20 20 N 1.32282 * 119.20009 * 0.02562 * 19 15 14 21 21 C 1.53775 * 87.07992 * 334.56762 * 9 8 6 22 22 C 1.38243 * 120.05598 * 359.47049 * 5 4 3 23 23 C 1.38289 * 120.11272 * 0.23776 * 22 5 4 24 24 C 1.38128 * 120.05568 * 0.03737 * 23 22 5 25 25 H 1.08993 * 109.47293 * 179.97438 * 1 2 3 26 26 H 1.08998 * 109.46854 * 299.99842 * 1 2 3 27 27 H 1.08997 * 109.47006 * 59.99261 * 1 2 3 28 28 H 1.08001 * 120.02551 * 359.97438 * 4 3 2 29 29 H 1.08997 * 113.61673 * 254.61641 * 8 6 5 30 30 H 1.09009 * 113.61202 * 25.42872 * 8 6 5 31 31 H 0.97006 * 119.99863 * 334.99879 * 11 9 8 32 32 H 1.07998 * 120.40487 * 180.29319 * 14 13 12 33 33 H 1.09000 * 109.47688 * 125.01581 * 16 15 14 34 34 H 0.96693 * 113.99794 * 59.99042 * 17 16 15 35 35 H 1.48502 * 110.00477 * 180.02562 * 18 16 15 36 36 H 1.48504 * 110.00222 * 301.32311 * 18 16 15 37 37 H 1.07999 * 120.40122 * 180.02562 * 19 15 14 38 38 H 1.08993 * 113.61636 * 270.87622 * 21 9 8 39 39 H 1.09008 * 113.61006 * 139.97865 * 21 9 8 40 40 H 1.08005 * 119.94500 * 180.25769 * 22 5 4 41 41 H 1.07996 * 119.97424 * 180.02562 * 23 22 5 42 42 H 1.07992 * 120.02826 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4312 1.2848 -0.0062 5 6 4.0560 2.5171 -0.0007 6 6 5.5609 2.5981 -0.0017 7 1 6.0369 1.6320 0.1666 8 6 6.1356 3.3670 -1.2031 9 6 7.1524 3.9787 -0.2249 10 1 7.3488 5.0358 -0.4037 11 7 8.3779 3.1886 -0.0823 12 6 9.5545 3.8016 0.3119 13 7 9.5562 5.1048 0.5510 14 6 10.6623 5.7203 0.9347 15 6 11.8304 4.9872 1.0744 16 6 13.1116 5.6547 1.5032 17 8 14.0641 5.5848 0.4401 18 14 12.7737 7.4393 1.9176 19 6 11.7944 3.6270 0.8109 20 7 10.6537 3.0722 0.4356 21 6 6.1196 3.7231 0.8853 22 6 3.3020 3.6757 -0.0002 23 6 1.9209 3.6048 -0.0002 24 6 1.2914 2.3753 0.0001 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 4.0206 0.3799 -0.0105 29 1 6.5881 2.7235 -1.9575 30 1 5.4436 4.0947 -1.6273 31 1 8.3646 2.2358 -0.2641 32 1 10.6565 6.7820 1.1327 33 1 13.5096 5.1468 2.3817 34 1 13.7759 6.0173 -0.3752 35 1 14.0295 8.1090 2.3414 36 1 12.2008 8.1352 0.7373 37 1 12.6870 3.0272 0.9106 38 1 5.4240 4.5491 1.0331 39 1 6.5593 3.3669 1.8170 40 1 3.7924 4.6381 -0.0001 41 1 1.3341 4.5114 -0.0002 42 1 0.2129 2.3204 -0.0002 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10812632_12175864.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:12:46 Heat of formation + Delta-G solvation = 50.586231 kcal Electronic energy + Delta-G solvation = -24665.628543 eV Core-core repulsion = 21000.099452 eV Total energy + Delta-G solvation = -3665.529090 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.142 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.13851 -41.39399 -40.31134 -38.32223 -37.89497 -35.44442 -34.66651 -32.54265 -31.79680 -30.78310 -28.30056 -26.95528 -26.74264 -26.09016 -25.37575 -23.58803 -23.24626 -22.28266 -20.38460 -19.60855 -18.84403 -18.35049 -18.07158 -17.22733 -16.93952 -16.66706 -16.58191 -16.41245 -16.28734 -16.02369 -15.68966 -15.45520 -15.19749 -14.60120 -14.43019 -14.35344 -14.09132 -13.96708 -13.61098 -13.34749 -13.28188 -13.13724 -12.72040 -12.34282 -12.24591 -12.21475 -11.83495 -11.76612 -11.70445 -11.64891 -11.33043 -11.15383 -10.70214 -9.99959 -9.72690 -9.14867 -9.07197 -5.02711 0.07465 0.18099 0.35315 0.52192 1.21893 1.51540 1.77285 1.91275 2.32400 2.75752 2.82566 3.13673 3.32306 3.43120 3.60417 3.65859 3.67603 3.72622 3.79272 3.85149 3.91628 4.04434 4.14630 4.19132 4.19735 4.20931 4.35771 4.51762 4.54612 4.56683 4.60775 4.64332 4.68826 4.72694 4.80455 4.94591 4.98496 5.06513 5.12196 5.33589 5.36551 5.50747 5.67504 5.81651 5.82118 6.03422 6.34520 6.41627 6.45748 7.31042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.149 4.149 5 C -0.031 4.031 6 C -0.075 4.075 7 H 0.098 0.902 8 C -0.136 4.136 9 C 0.135 3.865 10 H 0.111 0.889 11 N -0.677 5.677 12 C 0.570 3.430 13 N -0.560 5.560 14 C 0.198 3.802 15 C -0.292 4.292 16 C -0.053 4.053 17 O -0.530 6.530 18 Si 0.680 3.320 19 C 0.224 3.776 20 N -0.569 5.569 21 C -0.142 4.142 22 C -0.154 4.154 23 C -0.077 4.077 24 C -0.213 4.213 25 H 0.101 0.899 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.129 0.871 29 H 0.077 0.923 30 H 0.101 0.899 31 H 0.415 0.585 32 H 0.167 0.833 33 H 0.120 0.880 34 H 0.376 0.624 35 H -0.253 1.253 36 H -0.258 1.258 37 H 0.170 0.830 38 H 0.098 0.902 39 H 0.074 0.926 40 H 0.125 0.875 41 H 0.125 0.875 42 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.051 1.717 1.032 3.650 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.168 4.168 5 C -0.032 4.032 6 C -0.093 4.093 7 H 0.116 0.884 8 C -0.174 4.174 9 C 0.029 3.971 10 H 0.129 0.871 11 N -0.313 5.313 12 C 0.214 3.786 13 N -0.282 5.282 14 C 0.030 3.970 15 C -0.301 4.301 16 C -0.164 4.164 17 O -0.336 6.336 18 Si 0.581 3.419 19 C 0.056 3.944 20 N -0.291 5.291 21 C -0.181 4.181 22 C -0.172 4.172 23 C -0.095 4.095 24 C -0.232 4.232 25 H 0.120 0.880 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.147 0.853 29 H 0.096 0.904 30 H 0.120 0.880 31 H 0.253 0.747 32 H 0.183 0.817 33 H 0.138 0.862 34 H 0.223 0.777 35 H -0.178 1.178 36 H -0.182 1.182 37 H 0.187 0.813 38 H 0.116 0.884 39 H 0.093 0.907 40 H 0.143 0.857 41 H 0.143 0.857 42 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -3.507 1.682 0.962 4.006 hybrid contribution 0.665 -0.187 -0.924 1.154 sum -2.842 1.495 0.038 3.211 Atomic orbital electron populations 1.23083 0.78100 1.04192 1.01429 1.86081 1.21613 1.26920 1.88583 1.19041 0.92320 0.84256 0.95979 1.20317 0.91329 0.98254 1.06886 1.19446 0.94702 0.92156 0.96857 1.21623 0.90858 0.99307 0.97526 0.88358 1.23465 0.97585 1.00028 0.96368 1.21847 0.82277 0.96756 0.96218 0.87134 1.43834 1.04635 1.11076 1.71711 1.19353 0.86427 0.85426 0.87386 1.67925 1.30444 1.09343 1.20518 1.22849 0.86614 0.99678 0.87866 1.21642 0.98346 0.97412 1.12669 1.24671 0.87635 1.11206 0.92928 1.86615 1.43505 1.79348 1.24130 0.95177 0.85037 0.74281 0.87448 1.22842 0.94360 0.91585 0.85651 1.67989 0.99246 1.40019 1.21820 1.23597 0.97983 0.98478 0.98075 1.20910 0.93613 0.98128 1.04581 1.20945 0.94589 0.97043 0.96904 1.21269 1.00148 0.92470 1.09276 0.88048 0.92545 0.92557 0.85316 0.90430 0.88044 0.74710 0.81662 0.86218 0.77669 1.17781 1.18247 0.81268 0.88400 0.90712 0.85669 0.85657 0.85511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.82 10.50 -19.43 -0.20 -1.02 16 3 C 0.13 0.32 6.69 -39.21 -0.26 0.05 16 4 C -0.15 -0.28 9.65 -39.43 -0.38 -0.66 16 5 C -0.03 -0.02 5.29 -104.65 -0.55 -0.57 16 6 C -0.07 0.08 3.86 -90.96 -0.35 -0.27 16 7 H 0.10 -0.13 8.09 -51.93 -0.42 -0.55 16 8 C -0.14 0.23 7.29 -25.92 -0.19 0.04 16 9 C 0.14 -0.12 4.33 -67.12 -0.29 -0.41 16 10 H 0.11 -0.01 7.36 -51.93 -0.38 -0.39 16 11 N -0.68 -0.24 5.41 -55.01 -0.30 -0.54 16 12 C 0.57 1.35 8.42 -322.81 -2.72 -1.37 16 13 N -0.56 -1.15 9.13 -13.93 -0.13 -1.28 16 14 C 0.20 0.04 9.92 -17.22 -0.17 -0.13 16 15 C -0.29 0.07 5.36 -104.35 -0.56 -0.49 16 16 C -0.05 0.07 2.83 36.00 0.10 0.17 16 17 O -0.53 -0.12 12.85 -35.23 -0.45 -0.58 16 18 Si 0.68 -1.32 29.95 -169.99 -5.09 -6.41 16 19 C 0.22 0.21 10.99 -17.23 -0.19 0.02 16 20 N -0.57 -1.52 10.46 -13.93 -0.15 -1.67 16 21 C -0.14 0.16 7.26 -25.92 -0.19 -0.03 16 22 C -0.15 -0.02 8.54 -39.56 -0.34 -0.36 16 23 C -0.08 -0.03 10.04 -39.60 -0.40 -0.43 16 24 C -0.21 -0.25 9.04 -39.43 -0.36 -0.60 16 25 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 26 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 27 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 28 H 0.13 0.15 8.05 -52.49 -0.42 -0.27 16 29 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.10 -0.21 7.64 -51.92 -0.40 -0.61 16 31 H 0.42 -0.24 8.82 -40.82 -0.36 -0.60 16 32 H 0.17 -0.35 5.01 -52.49 -0.26 -0.61 16 33 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 34 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 35 H -0.25 -0.38 7.11 56.52 0.40 0.03 16 36 H -0.26 0.04 7.02 56.52 0.40 0.44 16 37 H 0.17 -0.15 8.06 -52.49 -0.42 -0.57 16 38 H 0.10 -0.17 6.40 -51.93 -0.33 -0.50 16 39 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 40 H 0.13 -0.20 6.72 -52.48 -0.35 -0.56 16 41 H 0.13 -0.19 8.06 -52.49 -0.42 -0.62 16 42 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 LS Contribution 348.65 15.07 5.25 5.25 Total: 0.00 -7.02 348.65 -12.31 -19.32 By element: Atomic # 1 Polarization: -3.62 SS G_CDS: -5.39 Total: -9.01 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -5.85 Total: -4.07 kcal Atomic # 7 Polarization: -2.91 SS G_CDS: -0.57 Total: -3.48 kcal Atomic # 8 Polarization: -0.94 SS G_CDS: -0.66 Total: -1.60 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.09 Total: -6.41 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -7.02 -12.31 -19.32 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10812632_12175864.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.908 kcal (2) G-P(sol) polarization free energy of solvation -7.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.891 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.305 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.322 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds