Wall clock time and date at job start Mon Mar 8 2021 06:12:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35904 * 116.99702 * 2 1 4 4 C 1.38708 * 120.05650 * 180.25269 * 3 2 1 5 5 C 1.38169 * 119.94604 * 180.21448 * 4 3 2 6 6 C 1.50696 * 119.97603 * 179.79343 * 5 4 3 7 7 H 1.09006 * 112.85046 * 10.91818 * 6 5 4 8 8 C 1.53779 * 113.69216 * 142.18674 * 6 5 4 9 9 C 1.53784 * 87.08045 * 139.99356 * 8 6 5 10 10 H 1.09004 * 113.61451 * 220.02152 * 9 8 6 11 11 N 1.46496 * 113.61524 * 89.11591 * 9 8 6 12 12 C 1.39007 * 120.00091 * 107.50136 * 11 9 8 13 13 N 1.32391 * 119.70652 * 179.97438 * 12 11 9 14 14 C 1.31975 * 121.61916 * 179.97438 * 13 12 11 15 15 C 1.38013 * 120.85891 * 0.03178 * 14 13 12 16 16 C 1.50704 * 120.33468 * 179.97438 * 15 14 13 17 17 O 1.42899 * 109.47492 * 119.99573 * 16 15 14 18 18 Si 1.86300 * 109.46934 * 359.97438 * 16 15 14 19 19 C 1.38889 * 119.33012 * 359.96870 * 15 14 13 20 20 C 1.38294 * 118.50315 * 359.73470 * 19 15 14 21 21 C 1.53779 * 113.61244 * 239.72529 * 6 5 4 22 22 C 1.38251 * 120.04909 * 359.51486 * 5 4 3 23 23 C 1.38285 * 120.11458 * 0.27979 * 22 5 4 24 24 C 1.38121 * 120.05536 * 359.95048 * 23 22 5 25 25 H 1.08991 * 109.47483 * 59.99909 * 1 2 3 26 26 H 1.09007 * 109.46477 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.47334 * 299.99388 * 1 2 3 28 28 H 1.07998 * 120.02983 * 359.97438 * 4 3 2 29 29 H 1.09002 * 113.61557 * 25.44468 * 8 6 5 30 30 H 1.09004 * 113.61501 * 254.53888 * 8 6 5 31 31 H 0.96998 * 120.00377 * 287.50245 * 11 9 8 32 32 H 1.08006 * 119.56690 * 180.02562 * 14 13 12 33 33 H 1.08997 * 109.47049 * 239.99345 * 16 15 14 34 34 H 0.96704 * 113.99678 * 300.00220 * 17 16 15 35 35 H 1.48504 * 109.99759 * 180.02562 * 18 16 15 36 36 H 1.48493 * 109.99883 * 301.31675 * 18 16 15 37 37 H 1.07997 * 120.74577 * 180.02562 * 19 15 14 38 38 H 1.08005 * 120.45084 * 180.28158 * 20 19 15 39 39 H 1.08997 * 113.61646 * 105.38683 * 21 6 5 40 40 H 1.09000 * 113.61527 * 334.47954 * 21 6 5 41 41 H 1.08005 * 119.93921 * 180.24968 * 22 5 4 42 42 H 1.07999 * 119.97040 * 179.97438 * 23 22 5 43 43 H 1.07997 * 120.02742 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4310 1.2850 -0.0053 5 6 4.0558 2.5173 -0.0008 6 6 5.5606 2.5985 -0.0018 7 1 6.0363 1.6372 -0.1965 8 6 6.1169 3.7462 -0.8610 9 6 7.1528 3.9729 0.2528 10 1 7.3496 5.0252 0.4585 11 7 8.3769 3.1860 0.0848 12 6 9.5579 3.8111 -0.2984 13 7 10.6610 3.0944 -0.4480 14 6 11.8024 3.6488 -0.8109 15 6 11.8864 5.0057 -1.0482 16 6 13.1960 5.6265 -1.4614 17 8 13.0463 6.2482 -2.7393 18 14 14.5050 4.3047 -1.5629 19 6 10.7519 5.7935 -0.9023 20 6 9.5688 5.1836 -0.5271 21 6 6.1385 3.3360 1.2175 22 6 3.3016 3.6759 -0.0012 23 6 1.9206 3.6048 -0.0002 24 6 1.2912 2.3753 0.0001 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3632 -1.0278 -0.0005 27 1 -0.3634 0.5137 0.8900 28 1 4.0206 0.3802 -0.0090 29 1 5.4207 4.5757 -0.9853 30 1 6.5540 3.4144 -1.8028 31 1 8.3635 2.2288 0.2409 32 1 12.6821 3.0324 -0.9235 33 1 13.4917 6.3745 -0.7259 34 1 12.7836 5.6404 -3.4441 35 1 15.8016 4.9041 -1.9690 36 1 14.6479 3.6294 -0.2482 37 1 10.7916 6.8575 -1.0826 38 1 8.6665 5.7654 -0.4089 39 1 6.5931 2.6731 1.9537 40 1 5.4482 4.0533 1.6615 41 1 3.7919 4.6383 -0.0017 42 1 1.3337 4.5114 -0.0001 43 1 0.2127 2.3203 0.0005 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10812632_13915762.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:12:49 Heat of formation + Delta-G solvation = 33.681717 kcal Electronic energy + Delta-G solvation = -24518.889803 eV Core-core repulsion = 20918.053589 eV Total energy + Delta-G solvation = -3600.836214 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.75229 -41.18123 -40.27047 -38.23936 -37.70754 -35.27124 -33.36731 -32.26801 -31.40039 -30.58945 -28.32211 -26.84875 -26.74738 -25.67682 -24.67811 -23.59197 -22.87990 -22.09415 -20.27142 -19.18798 -18.44727 -18.41239 -17.40248 -17.23810 -16.96019 -16.68502 -16.50532 -16.33829 -16.07709 -16.02863 -15.37776 -15.23542 -14.97709 -14.46534 -14.41141 -14.20241 -14.03773 -14.00591 -13.63715 -13.41864 -13.30961 -13.24085 -12.75374 -12.40683 -12.29885 -12.24079 -11.97505 -11.74471 -11.67292 -11.38020 -11.06609 -10.70467 -10.37556 -10.35610 -9.75617 -9.14629 -8.69601 -5.01556 0.26043 0.32450 0.44750 0.49276 1.33033 1.64694 1.99514 2.01026 2.30320 2.72938 2.86851 3.33504 3.49456 3.54624 3.60935 3.63715 3.79930 3.80778 3.85907 3.95793 4.02391 4.08691 4.11835 4.16159 4.19378 4.31626 4.35337 4.41427 4.51196 4.54964 4.57109 4.58702 4.61880 4.72354 4.75731 4.89502 4.92518 5.01168 5.06529 5.11104 5.33830 5.34420 5.47529 5.54695 5.64752 5.78837 6.02006 6.43398 6.53046 6.60855 7.17392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.130 3.870 4 C -0.149 4.149 5 C -0.032 4.032 6 C -0.072 4.072 7 H 0.099 0.901 8 C -0.148 4.148 9 C 0.128 3.872 10 H 0.100 0.900 11 N -0.704 5.704 12 C 0.410 3.590 13 N -0.540 5.540 14 C 0.156 3.844 15 C -0.236 4.236 16 C -0.052 4.052 17 O -0.543 6.543 18 Si 0.682 3.318 19 C -0.006 4.006 20 C -0.238 4.238 21 C -0.135 4.135 22 C -0.155 4.155 23 C -0.077 4.077 24 C -0.213 4.213 25 H 0.056 0.944 26 H 0.101 0.899 27 H 0.056 0.944 28 H 0.129 0.871 29 H 0.097 0.903 30 H 0.077 0.923 31 H 0.407 0.593 32 H 0.155 0.845 33 H 0.112 0.888 34 H 0.379 0.621 35 H -0.253 1.253 36 H -0.256 1.256 37 H 0.136 0.864 38 H 0.135 0.865 39 H 0.078 0.922 40 H 0.100 0.900 41 H 0.125 0.875 42 H 0.125 0.875 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.708 0.292 -0.740 3.793 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.085 3.915 4 C -0.167 4.167 5 C -0.032 4.032 6 C -0.091 4.091 7 H 0.118 0.882 8 C -0.187 4.187 9 C 0.022 3.978 10 H 0.118 0.882 11 N -0.336 5.336 12 C 0.175 3.825 13 N -0.256 5.256 14 C -0.002 4.002 15 C -0.241 4.241 16 C -0.164 4.164 17 O -0.348 6.348 18 Si 0.584 3.416 19 C -0.031 4.031 20 C -0.263 4.263 21 C -0.173 4.173 22 C -0.173 4.173 23 C -0.095 4.095 24 C -0.231 4.231 25 H 0.075 0.925 26 H 0.120 0.880 27 H 0.075 0.925 28 H 0.147 0.853 29 H 0.115 0.885 30 H 0.096 0.904 31 H 0.243 0.757 32 H 0.171 0.829 33 H 0.129 0.871 34 H 0.226 0.774 35 H -0.178 1.178 36 H -0.181 1.181 37 H 0.154 0.846 38 H 0.153 0.847 39 H 0.097 0.903 40 H 0.119 0.881 41 H 0.143 0.857 42 H 0.143 0.857 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.876 -0.440 0.086 2.911 hybrid contribution -0.761 0.988 0.289 1.280 sum -3.637 0.548 0.375 3.697 Atomic orbital electron populations 1.23088 0.78076 1.04221 1.01433 1.86084 1.21632 1.26892 1.88559 1.19042 0.92323 0.84271 0.95914 1.20318 0.91340 0.98264 1.06820 1.19446 0.94696 0.92168 0.96926 1.21572 0.90827 0.99302 0.97367 0.88250 1.23670 0.98023 0.98613 0.98372 1.21875 0.83171 0.96109 0.96685 0.88238 1.44163 1.05109 1.10487 1.73838 1.18361 0.86206 0.88593 0.89359 1.67130 0.98589 1.39644 1.20263 1.22207 0.94222 0.91606 0.92143 1.20996 0.97687 0.95230 1.10183 1.24777 0.99781 1.04444 0.87397 1.86489 1.91884 1.39142 1.17273 0.94848 0.78336 0.81924 0.86491 1.21191 0.90791 1.00182 0.90980 1.21505 1.00213 0.93984 1.10562 1.23437 0.97426 1.00095 0.96354 1.20900 0.93623 0.98070 1.04712 1.20941 0.94585 0.97054 0.96899 1.21272 1.00172 0.92466 1.09226 0.92542 0.88023 0.92541 0.85285 0.88470 0.90417 0.75693 0.82864 0.87087 0.77424 1.17828 1.18108 0.84635 0.84749 0.90282 0.88130 0.85743 0.85660 0.85489 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.76 10.50 -19.44 -0.20 -0.96 16 3 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 4 C -0.15 -0.25 9.65 -39.43 -0.38 -0.63 16 5 C -0.03 -0.01 5.29 -104.64 -0.55 -0.56 16 6 C -0.07 0.11 3.85 -90.96 -0.35 -0.24 16 7 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 8 C -0.15 0.30 7.25 -25.92 -0.19 0.12 16 9 C 0.13 -0.27 4.11 -67.12 -0.28 -0.55 16 10 H 0.10 -0.27 6.11 -51.93 -0.32 -0.59 16 11 N -0.70 0.27 5.44 -53.14 -0.29 -0.02 16 12 C 0.41 0.65 7.65 -155.02 -1.19 -0.54 16 13 N -0.54 -1.49 10.39 -12.44 -0.13 -1.62 16 14 C 0.16 0.20 9.84 -17.57 -0.17 0.02 16 15 C -0.24 -0.15 5.40 -104.46 -0.56 -0.72 16 16 C -0.05 0.00 2.84 36.01 0.10 0.11 16 17 O -0.54 -0.15 12.78 -35.23 -0.45 -0.60 16 18 Si 0.68 -0.57 29.82 -169.99 -5.07 -5.64 16 19 C -0.01 0.00 9.77 -39.32 -0.38 -0.39 16 20 C -0.24 -0.14 9.28 -39.23 -0.36 -0.50 16 21 C -0.14 0.31 7.29 -25.92 -0.19 0.12 16 22 C -0.15 0.04 8.61 -39.56 -0.34 -0.30 16 23 C -0.08 -0.01 10.04 -39.61 -0.40 -0.41 16 24 C -0.21 -0.20 9.04 -39.43 -0.36 -0.56 16 25 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 26 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 27 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 28 H 0.13 0.12 8.05 -52.49 -0.42 -0.30 16 29 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 30 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.41 -0.26 8.82 -40.82 -0.36 -0.62 16 32 H 0.15 -0.11 4.88 -52.48 -0.26 -0.36 16 33 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 34 H 0.38 -1.29 8.70 45.56 0.40 -0.89 16 35 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 36 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 37 H 0.14 -0.06 8.06 -52.49 -0.42 -0.48 16 38 H 0.13 -0.17 6.04 -52.48 -0.32 -0.49 16 39 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 40 H 0.10 -0.27 7.72 -51.93 -0.40 -0.67 16 41 H 0.12 -0.27 6.66 -52.48 -0.35 -0.62 16 42 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 43 H 0.13 -0.10 6.30 -52.49 -0.33 -0.43 16 LS Contribution 351.06 15.07 5.29 5.29 Total: 0.00 -6.84 351.06 -11.35 -18.19 By element: Atomic # 1 Polarization: -5.00 SS G_CDS: -5.63 Total: -10.63 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -4.87 Total: -4.02 kcal Atomic # 7 Polarization: -1.21 SS G_CDS: -0.42 Total: -1.63 kcal Atomic # 8 Polarization: -0.91 SS G_CDS: -0.65 Total: -1.56 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.07 Total: -5.64 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -6.84 -11.35 -18.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10812632_13915762.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.868 kcal (2) G-P(sol) polarization free energy of solvation -6.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.030 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.186 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds