Wall clock time and date at job start Mon Mar 8 2021 03:25:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86294 * 109.46712 * 2 1 4 4 C 1.50699 * 109.46799 * 240.00128 * 2 1 3 5 5 C 1.38602 * 120.72325 * 299.99930 * 4 2 1 6 6 N 1.32276 * 119.20010 * 179.97438 * 5 4 2 7 7 C 1.32493 * 120.73813 * 0.02562 * 6 5 4 8 8 N 1.38407 * 119.21735 * 180.02562 * 7 6 5 9 9 C 1.46497 * 120.00123 * 179.97438 * 8 7 6 10 10 H 1.09002 * 112.84935 * 25.32718 * 9 8 7 11 11 C 1.53786 * 113.61643 * 156.52390 * 9 8 7 12 12 C 1.53783 * 87.08050 * 140.06125 * 11 9 8 13 13 H 1.09005 * 113.60997 * 89.20380 * 12 11 9 14 14 O 1.42901 * 113.61443 * 220.01768 * 12 11 9 15 15 C 1.53781 * 113.61305 * 254.13238 * 9 8 7 16 16 N 1.32491 * 121.56680 * 0.26779 * 7 6 5 17 17 C 1.32276 * 120.74037 * 359.45059 * 16 7 6 18 18 H 0.96691 * 114.00457 * 59.99992 * 1 2 3 19 19 H 1.08998 * 109.47068 * 120.00034 * 2 1 3 20 20 H 1.48507 * 110.00428 * 298.68080 * 3 2 1 21 21 H 1.48499 * 110.00450 * 60.00526 * 3 2 1 22 22 H 1.08000 * 120.40033 * 359.97438 * 5 4 2 23 23 H 0.97006 * 119.99819 * 359.97438 * 8 7 6 24 24 H 1.08992 * 113.61675 * 254.61383 * 11 9 8 25 25 H 1.09005 * 113.61030 * 25.43033 * 11 9 8 26 26 H 0.96705 * 113.99535 * 180.02562 * 14 12 11 27 27 H 1.08999 * 113.61567 * 334.48111 * 15 9 8 28 28 H 1.08998 * 113.61196 * 105.38466 * 15 9 8 29 29 H 1.07994 * 120.40499 * 180.29278 * 17 16 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6057 -2.0371 -1.4647 6 7 2.0625 -2.6310 -2.5548 7 6 2.8232 -1.9721 -3.4167 8 7 3.2836 -2.6242 -4.5474 9 6 4.1253 -1.9121 -5.5120 10 1 4.6719 -1.0818 -5.0648 11 6 5.0054 -2.8407 -6.3652 12 6 4.6863 -1.9203 -7.5551 13 1 5.3872 -1.0930 -7.6674 14 8 4.4577 -2.6237 -8.7778 15 6 3.3923 -1.5386 -6.8113 16 7 3.1574 -0.7053 -3.2195 17 6 2.7293 -0.0513 -2.1525 18 1 -0.3934 0.4416 -0.7650 19 1 1.7924 -0.5138 0.8900 20 1 1.5878 2.4586 -1.2243 21 1 1.5615 2.4679 1.2085 22 1 0.9864 -2.5794 -0.7656 23 1 3.0489 -3.5528 -4.7011 24 1 6.0564 -2.8328 -6.0766 25 1 4.6030 -3.8483 -6.4706 26 1 4.2569 -2.0500 -9.5299 27 1 2.5491 -2.1903 -7.0397 28 1 3.1421 -0.4801 -6.8825 29 1 3.0013 0.9826 -1.9995 There are 40 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 40 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10859624_12175864.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:25:16 Heat of formation + Delta-G solvation = 11.460287 kcal Electronic energy + Delta-G solvation = -15022.483797 eV Core-core repulsion = 12334.775497 eV Total energy + Delta-G solvation = -2687.708300 eV No. of doubly occupied orbitals = 40 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 224.095 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -42.10824 -40.45030 -38.21771 -36.79889 -34.87863 -34.60523 -31.96897 -27.01563 -26.84171 -25.94875 -24.61192 -23.02636 -21.02119 -19.36837 -19.12997 -18.34509 -18.03505 -16.68610 -16.54753 -16.24614 -15.91165 -15.80581 -15.60971 -14.83504 -14.59253 -14.02201 -13.76909 -13.57218 -13.15604 -12.90698 -12.41770 -12.25768 -11.86255 -11.84661 -11.70887 -11.24433 -10.91053 -10.72661 -10.03006 -9.10938 -5.04507 0.05893 0.16123 1.20680 1.51125 1.78243 1.90355 2.79713 3.07998 3.21915 3.30990 3.36945 3.54916 3.62083 3.70279 3.74130 3.79451 3.85743 4.19862 4.39757 4.53016 4.63769 4.64482 4.72101 4.84475 4.88853 5.03787 5.31562 5.78288 5.99751 6.32835 6.40316 6.61156 7.28936 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.678 3.322 4 C -0.293 4.293 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.568 3.432 8 N -0.682 5.682 9 C 0.141 3.859 10 H 0.124 0.876 11 C -0.138 4.138 12 C 0.080 3.920 13 H 0.089 0.911 14 O -0.558 6.558 15 C -0.184 4.184 16 N -0.563 5.563 17 C 0.199 3.801 18 H 0.376 0.624 19 H 0.120 0.880 20 H -0.258 1.258 21 H -0.253 1.253 22 H 0.171 0.829 23 H 0.416 0.584 24 H 0.084 0.916 25 H 0.096 0.904 26 H 0.382 0.618 27 H 0.092 0.908 28 H 0.076 0.924 29 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.496 2.161 -0.710 3.377 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.579 3.421 4 C -0.301 4.301 5 C 0.055 3.945 6 N -0.291 5.291 7 C 0.211 3.789 8 N -0.318 5.318 9 C 0.035 3.965 10 H 0.141 0.859 11 C -0.176 4.176 12 C 0.020 3.980 13 H 0.106 0.894 14 O -0.364 6.364 15 C -0.224 4.224 16 N -0.285 5.285 17 C 0.032 3.968 18 H 0.224 0.776 19 H 0.138 0.862 20 H -0.182 1.182 21 H -0.178 1.178 22 H 0.188 0.812 23 H 0.254 0.746 24 H 0.103 0.897 25 H 0.114 0.886 26 H 0.229 0.771 27 H 0.110 0.890 28 H 0.094 0.906 29 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 2.961 1.773 -0.750 3.532 hybrid contribution -1.654 0.383 -0.190 1.708 sum 1.308 2.156 -0.940 2.691 Atomic orbital electron populations 1.86609 1.17774 1.79854 1.49363 1.24678 0.83749 1.10530 0.97462 0.95252 0.91512 0.74545 0.80793 1.21656 1.08181 0.98348 1.01958 1.22847 0.90192 0.90601 0.90829 1.68002 1.16060 1.39354 1.05655 1.19430 0.86794 0.85696 0.86936 1.44150 1.53573 1.14505 1.19544 1.22256 0.91660 0.96018 0.86574 0.85855 1.23488 1.01001 0.99746 0.93407 1.23111 0.96129 0.94904 0.83819 0.89369 1.86523 1.92999 1.37592 1.19248 1.24296 0.98993 1.02725 0.96346 1.67901 1.28385 1.08477 1.23724 1.22789 0.88531 0.98848 0.86666 0.77650 0.86180 1.18247 1.17760 0.81224 0.74591 0.89719 0.88563 0.77074 0.88963 0.90574 0.81644 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.09 12.79 -35.23 -0.45 -0.54 15 2 C -0.05 0.07 2.85 36.01 0.10 0.17 15 3 Si 0.68 -1.36 29.87 -169.99 -5.08 -6.43 15 4 C -0.29 0.05 5.40 -104.35 -0.56 -0.51 15 5 C 0.22 0.24 10.92 -17.23 -0.19 0.05 15 6 N -0.57 -1.65 10.46 -13.93 -0.15 -1.80 15 7 C 0.57 1.48 8.42 -322.81 -2.72 -1.24 15 8 N -0.68 -0.52 5.51 -55.00 -0.30 -0.83 15 9 C 0.14 -0.08 4.22 -67.12 -0.28 -0.36 15 10 H 0.12 -0.04 7.40 -51.93 -0.38 -0.42 15 11 C -0.14 0.15 7.66 -25.92 -0.20 -0.04 15 12 C 0.08 -0.10 5.22 -25.77 -0.13 -0.23 15 13 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 15 14 O -0.56 -0.08 13.67 -35.23 -0.48 -0.56 15 15 C -0.18 0.15 7.73 -25.78 -0.20 -0.05 15 16 N -0.56 -1.18 9.15 -13.93 -0.13 -1.31 15 17 C 0.20 0.03 9.92 -17.22 -0.17 -0.14 15 18 H 0.38 -0.89 8.70 45.56 0.40 -0.49 15 19 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 15 20 H -0.26 0.02 7.11 56.52 0.40 0.42 15 21 H -0.25 -0.36 7.11 56.52 0.40 0.04 15 22 H 0.17 -0.11 8.06 -52.49 -0.42 -0.54 15 23 H 0.42 -0.02 8.83 -40.82 -0.36 -0.38 15 24 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 15 25 H 0.10 -0.05 8.11 -51.93 -0.42 -0.48 15 26 H 0.38 -1.44 9.12 45.56 0.42 -1.03 15 27 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 15 28 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 15 29 H 0.17 -0.40 5.04 -52.49 -0.26 -0.66 15 LS Contribution 253.79 15.07 3.82 3.82 Total: 0.00 -6.89 253.79 -9.46 -16.35 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -2.34 Total: -6.34 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -4.36 Total: -2.36 kcal Atomic # 7 Polarization: -3.36 SS G_CDS: -0.58 Total: -3.94 kcal Atomic # 8 Polarization: -0.17 SS G_CDS: -0.93 Total: -1.11 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.08 Total: -6.43 kcal Total LS contribution 3.82 Total: 3.82 kcal Total: -6.89 -9.46 -16.35 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10859624_12175864.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.812 kcal (2) G-P(sol) polarization free energy of solvation -6.892 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.920 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.352 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.460 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds