Wall clock time and date at job start Mon Mar 8 2021 03:25:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86294 * 109.47276 * 2 1 4 4 C 1.50703 * 109.47181 * 239.99764 * 2 1 3 5 5 C 1.38838 * 120.33314 * 300.00575 * 4 2 1 6 6 C 1.38347 * 118.49984 * 179.97438 * 5 4 2 7 7 C 1.39093 * 119.10392 * 359.97438 * 6 5 4 8 8 N 1.39004 * 119.70966 * 179.97438 * 7 6 5 9 9 C 1.46502 * 119.99752 * 359.97438 * 8 7 6 10 10 H 1.08999 * 112.85025 * 23.81039 * 9 8 7 11 11 C 1.53779 * 113.61301 * 155.00050 * 9 8 7 12 12 C 1.53787 * 87.07963 * 89.11687 * 11 9 8 13 13 H 1.09004 * 113.61202 * 139.98084 * 12 11 9 14 14 O 1.42896 * 113.61435 * 270.88419 * 12 11 9 15 15 C 1.53779 * 113.61564 * 252.50117 * 9 8 7 16 16 N 1.32427 * 120.58648 * 0.25222 * 7 6 5 17 17 C 1.31945 * 121.62469 * 359.48399 * 16 7 6 18 18 H 0.96703 * 113.99969 * 300.00107 * 1 2 3 19 19 H 1.09000 * 109.46867 * 120.00280 * 2 1 3 20 20 H 1.48500 * 110.00194 * 178.67710 * 3 2 1 21 21 H 1.48497 * 110.00275 * 300.00088 * 3 2 1 22 22 H 1.07997 * 120.75314 * 359.97438 * 5 4 2 23 23 H 1.08006 * 120.44650 * 180.02562 * 6 5 4 24 24 H 0.96996 * 119.99851 * 179.97438 * 8 7 6 25 25 H 1.08997 * 113.61646 * 334.57319 * 11 9 8 26 26 H 1.08998 * 113.69354 * 203.67627 * 11 9 8 27 27 H 0.96699 * 113.99840 * 179.97438 * 14 12 11 28 28 H 1.09002 * 113.61557 * 156.33711 * 15 9 8 29 29 H 1.09004 * 113.61501 * 25.43131 * 15 9 8 30 30 H 1.08001 * 119.57645 * 180.24340 * 17 16 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6001 -2.0396 -1.4570 6 6 2.0815 -2.6544 -2.5991 7 6 2.8760 -1.9243 -3.4768 8 7 3.3668 -2.5298 -4.6278 9 6 3.0471 -3.9310 -4.9116 10 1 2.1330 -4.2645 -4.4204 11 6 3.1077 -4.2860 -6.4067 12 6 4.5942 -4.6139 -6.1880 13 1 4.9297 -5.5001 -6.7268 14 8 5.4605 -3.4919 -6.3685 15 6 4.2368 -4.8859 -4.7172 16 7 3.1735 -0.6591 -3.2230 17 6 2.7244 -0.0457 -2.1445 18 1 -0.3933 0.4417 0.7651 19 1 1.7923 -0.5139 0.8900 20 1 3.5346 1.7702 0.0322 21 1 1.5616 2.4679 -1.2084 22 1 0.9807 -2.5813 -0.7576 23 1 1.8429 -3.6871 -2.8067 24 1 3.9209 -2.0245 -5.2430 25 1 2.9410 -3.4335 -7.0650 26 1 2.5043 -5.1530 -6.6758 27 1 6.3966 -3.6919 -6.2320 28 1 3.9418 -5.9171 -4.5230 29 1 4.9815 -4.5175 -4.0116 30 1 2.9844 0.9882 -1.9722 There are 40 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 40 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10859624_13915762.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:25:19 Heat of formation + Delta-G solvation = 0.408154 kcal Electronic energy + Delta-G solvation = -15093.345573 eV Core-core repulsion = 12470.583927 eV Total energy + Delta-G solvation = -2622.761645 eV No. of doubly occupied orbitals = 40 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 223.100 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.52008 -40.46457 -37.82114 -36.46160 -34.63168 -33.28796 -31.12208 -26.92082 -26.66998 -25.21461 -24.46898 -22.44089 -20.58312 -19.12936 -18.37759 -18.16940 -17.80531 -16.66251 -16.34922 -16.31671 -15.37594 -15.29278 -15.24764 -14.82127 -14.11780 -13.95786 -13.78835 -13.70643 -13.60731 -12.74767 -12.45847 -12.25273 -11.93376 -11.66537 -11.06213 -10.83522 -10.65924 -10.49589 -10.13249 -8.61506 -4.95318 0.28455 0.49323 1.33471 1.68037 2.01510 2.06719 2.85820 2.94075 3.35223 3.49416 3.56014 3.61644 3.70482 3.85891 3.95781 4.02953 4.15734 4.38224 4.41616 4.50708 4.52535 4.68768 4.76531 4.81143 4.87209 4.91080 5.08676 5.35886 5.57344 6.10511 6.52670 6.66150 6.70428 7.23623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.055 4.055 3 Si 0.677 3.323 4 C -0.193 4.193 5 C -0.002 4.002 6 C -0.240 4.240 7 C 0.410 3.590 8 N -0.698 5.698 9 C 0.134 3.866 10 H 0.098 0.902 11 C -0.143 4.143 12 C 0.078 3.922 13 H 0.072 0.928 14 O -0.552 6.552 15 C -0.191 4.191 16 N -0.539 5.539 17 C 0.151 3.849 18 H 0.381 0.619 19 H 0.072 0.928 20 H -0.253 1.253 21 H -0.249 1.249 22 H 0.137 0.863 23 H 0.136 0.864 24 H 0.413 0.587 25 H 0.084 0.916 26 H 0.111 0.889 27 H 0.385 0.615 28 H 0.100 0.900 29 H 0.078 0.922 30 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.323 -3.075 2.720 4.118 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.166 4.166 3 Si 0.578 3.422 4 C -0.198 4.198 5 C -0.028 4.028 6 C -0.265 4.265 7 C 0.174 3.826 8 N -0.330 5.330 9 C 0.027 3.973 10 H 0.116 0.884 11 C -0.181 4.181 12 C 0.019 3.981 13 H 0.090 0.910 14 O -0.358 6.358 15 C -0.231 4.231 16 N -0.256 5.256 17 C -0.006 4.006 18 H 0.229 0.771 19 H 0.090 0.910 20 H -0.178 1.178 21 H -0.174 1.174 22 H 0.155 0.845 23 H 0.153 0.847 24 H 0.251 0.749 25 H 0.103 0.897 26 H 0.129 0.871 27 H 0.233 0.767 28 H 0.118 0.882 29 H 0.097 0.903 30 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 0.169 -2.232 0.974 2.441 hybrid contribution 0.334 -1.149 0.296 1.233 sum 0.503 -3.381 1.270 3.647 Atomic orbital electron populations 1.86494 1.17519 1.81753 1.49650 1.24417 0.85410 1.09890 0.96928 0.95404 0.80824 0.78305 0.87624 1.20018 1.05060 0.95878 0.98864 1.21162 0.93451 0.93104 0.95035 1.21502 1.05549 1.01998 0.97427 1.18391 0.89047 0.88334 0.86839 1.44206 1.55539 1.10783 1.22442 1.21773 0.97927 0.81044 0.96580 0.88420 1.23470 0.94880 1.03411 0.96371 1.22741 0.91258 0.88959 0.95170 0.91026 1.86402 1.21104 1.35274 1.92991 1.24253 0.99828 1.00559 0.98434 1.67121 1.27381 1.09364 1.21712 1.22005 0.92477 0.98042 0.88102 0.77144 0.91013 1.17829 1.17374 0.84468 0.84652 0.74866 0.89712 0.87071 0.76695 0.88183 0.90282 0.83789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.36 12.75 -35.23 -0.45 -0.81 16 2 C -0.05 -0.03 2.83 36.01 0.10 0.07 16 3 Si 0.68 -0.23 29.82 -169.99 -5.07 -5.30 16 4 C -0.19 -0.68 5.43 -104.46 -0.57 -1.25 16 5 C 0.00 0.00 9.77 -39.32 -0.38 -0.39 16 6 C -0.24 -0.65 9.29 -39.22 -0.36 -1.01 16 7 C 0.41 1.77 7.65 -155.01 -1.19 0.59 16 8 N -0.70 -1.71 5.32 -53.15 -0.28 -1.99 16 9 C 0.13 -0.04 4.11 -67.12 -0.28 -0.32 16 10 H 0.10 -0.12 6.10 -51.93 -0.32 -0.44 16 11 C -0.14 0.18 7.66 -25.92 -0.20 -0.02 16 12 C 0.08 -0.10 5.28 -25.91 -0.14 -0.24 16 13 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 14 O -0.55 0.00 12.31 -35.23 -0.43 -0.43 16 15 C -0.19 0.27 7.71 -25.92 -0.20 0.07 16 16 N -0.54 -3.28 10.39 -12.44 -0.13 -3.41 16 17 C 0.15 0.75 9.84 -17.57 -0.17 0.58 16 18 H 0.38 -1.70 8.74 45.56 0.40 -1.30 16 19 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 20 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 21 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 22 H 0.14 0.11 8.06 -52.49 -0.42 -0.31 16 23 H 0.14 0.04 6.03 -52.48 -0.32 -0.28 16 24 H 0.41 1.36 7.71 -40.82 -0.31 1.04 16 25 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 26 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 27 H 0.38 -1.34 9.12 45.56 0.42 -0.92 16 28 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 29 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.15 0.58 4.88 -52.49 -0.26 0.33 16 LS Contribution 253.69 15.07 3.82 3.82 Total: 0.00 -7.37 253.69 -8.46 -15.83 By element: Atomic # 1 Polarization: -3.27 SS G_CDS: -2.54 Total: -5.80 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: -3.38 Total: -1.91 kcal Atomic # 7 Polarization: -4.98 SS G_CDS: -0.41 Total: -5.40 kcal Atomic # 8 Polarization: -0.36 SS G_CDS: -0.88 Total: -1.24 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.07 Total: -5.30 kcal Total LS contribution 3.82 Total: 3.82 kcal Total: -7.37 -8.46 -15.83 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10859624_13915762.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.239 kcal (2) G-P(sol) polarization free energy of solvation -7.368 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.871 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.463 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.831 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds