Wall clock time and date at job start Mon Mar 8 2021 03:25:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86302 * 109.47067 * 2 1 4 4 C 1.50695 * 109.47609 * 239.99883 * 2 1 3 5 5 C 1.33333 * 125.94729 * 300.00230 * 4 2 1 6 6 N 1.32128 * 114.57493 * 180.02562 * 5 4 2 7 7 C 1.29682 * 116.86697 * 359.97438 * 6 5 4 8 8 N 1.38617 * 124.94601 * 179.97438 * 7 6 5 9 9 C 1.46496 * 119.99962 * 0.02970 * 8 7 6 10 10 H 1.08994 * 112.91109 * 23.74906 * 9 8 7 11 11 C 1.53787 * 113.61210 * 155.00170 * 9 8 7 12 12 C 1.53779 * 87.07963 * 139.97940 * 11 9 8 13 13 H 1.09001 * 113.61377 * 89.20020 * 12 11 9 14 14 O 1.42901 * 113.61102 * 220.01463 * 12 11 9 15 15 C 1.53779 * 87.08402 * 334.56577 * 12 11 9 16 16 S 1.70965 * 110.10571 * 0.24968 * 7 6 5 17 17 H 0.96701 * 113.99933 * 60.00445 * 1 2 3 18 18 H 1.09004 * 109.47433 * 119.99459 * 2 1 3 19 19 H 1.48500 * 110.00190 * 59.99965 * 3 2 1 20 20 H 1.48508 * 110.00129 * 181.31776 * 3 2 1 21 21 H 1.07996 * 122.71631 * 0.02562 * 5 4 2 22 22 H 0.97002 * 119.99548 * 180.02562 * 8 7 6 23 23 H 1.08997 * 113.61028 * 254.52900 * 11 9 8 24 24 H 1.09000 * 113.61529 * 25.43039 * 11 9 8 25 25 H 0.96703 * 113.99679 * 179.97438 * 14 12 11 26 26 H 1.09002 * 113.61557 * 270.88569 * 15 12 11 27 27 H 1.09004 * 113.61501 * 139.97990 * 15 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.6835 -1.9789 -1.5579 6 7 2.2386 -2.3725 -2.6904 7 6 2.9432 -1.4944 -3.3340 8 7 3.5975 -1.7262 -4.5339 9 6 3.5201 -3.0448 -5.1675 10 1 2.6389 -3.6102 -4.8645 11 6 3.7365 -3.0103 -6.6897 12 6 4.5561 -4.3009 -6.5232 13 1 3.9583 -5.2097 -6.5922 14 8 5.7279 -4.3441 -7.3400 15 6 4.8282 -3.8485 -5.0789 16 16 2.9540 -0.0116 -2.4832 17 1 -0.3933 0.4416 -0.7651 18 1 1.7923 -0.5138 0.8900 19 1 1.5614 2.4679 1.2085 20 1 3.5346 1.7704 -0.0321 21 1 1.0779 -2.6318 -0.9469 22 1 4.1064 -1.0153 -4.9539 23 1 2.8202 -3.1460 -7.2641 24 1 4.3269 -2.1587 -7.0276 25 1 6.2477 -5.1533 -7.2394 26 1 5.7171 -3.2260 -4.9765 27 1 4.7932 -4.6609 -4.3530 There are 38 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 38 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10859624_15704118.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:25:21 Heat of formation + Delta-G solvation = 1.193306 kcal Electronic energy + Delta-G solvation = -13586.698494 eV Core-core repulsion = 11053.123141 eV Total energy + Delta-G solvation = -2533.575352 eV No. of doubly occupied orbitals = 38 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 229.056 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -41.01583 -40.15181 -37.91278 -36.73237 -34.50927 -31.16491 -26.98766 -26.79938 -25.53874 -23.94528 -21.38270 -20.74189 -19.50443 -18.79818 -17.99410 -17.09521 -16.54716 -16.32986 -16.06882 -15.77563 -15.54628 -14.93131 -14.70915 -14.05044 -13.72932 -13.60510 -12.97643 -12.82039 -12.41313 -12.33815 -12.03795 -11.82669 -11.13446 -10.94835 -10.75859 -10.24762 -10.14644 -8.74837 -5.12886 -0.02973 0.02964 0.69477 1.26602 1.58893 1.91080 2.03190 2.09368 3.13504 3.35256 3.44038 3.51373 3.66956 3.77051 3.82454 3.95074 4.35688 4.48656 4.60319 4.62739 4.74849 4.81712 4.85491 4.95601 5.23299 5.83085 6.03009 6.52838 6.58837 7.00225 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.010 4.010 3 Si 0.655 3.345 4 C -0.307 4.307 5 C 0.119 3.881 6 N -0.551 5.551 7 C 0.326 3.674 8 N -0.680 5.680 9 C 0.142 3.858 10 H 0.122 0.878 11 C -0.138 4.138 12 C 0.080 3.920 13 H 0.088 0.912 14 O -0.558 6.558 15 C -0.184 4.184 16 S 0.088 5.912 17 H 0.380 0.620 18 H 0.121 0.879 19 H -0.236 1.236 20 H -0.241 1.241 21 H 0.176 0.824 22 H 0.415 0.585 23 H 0.084 0.916 24 H 0.096 0.904 25 H 0.382 0.618 26 H 0.092 0.908 27 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.371 0.605 -2.583 2.679 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.124 4.124 3 Si 0.556 3.444 4 C -0.430 4.430 5 C -0.032 4.032 6 N -0.277 5.277 7 C -0.044 4.044 8 N -0.319 5.319 9 C 0.034 3.966 10 H 0.139 0.861 11 C -0.177 4.177 12 C 0.020 3.980 13 H 0.106 0.894 14 O -0.364 6.364 15 C -0.224 4.224 16 S 0.337 5.663 17 H 0.227 0.773 18 H 0.138 0.862 19 H -0.159 1.159 20 H -0.165 1.165 21 H 0.193 0.807 22 H 0.253 0.747 23 H 0.103 0.897 24 H 0.114 0.886 25 H 0.230 0.770 26 H 0.111 0.889 27 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 1.108 1.776 -2.238 3.064 hybrid contribution 0.030 -1.494 0.631 1.622 sum 1.137 0.282 -1.607 1.989 Atomic orbital electron populations 1.86509 1.16898 1.81690 1.49136 1.24109 0.84823 1.08891 0.94613 0.94969 0.82001 0.78097 0.89379 1.25585 1.13191 0.99346 1.04896 1.21327 0.97061 0.93009 0.91755 1.66472 1.17157 1.33576 1.10464 1.23773 0.94852 0.93513 0.92296 1.44022 1.54197 1.14273 1.19362 1.22283 0.99107 0.83379 0.91839 0.86064 1.23501 1.00390 0.98321 0.95447 1.23061 0.87451 0.97869 0.89625 0.89406 1.86516 1.38216 1.45311 1.66345 1.24257 0.99142 1.01009 0.97981 1.83997 1.51315 1.13917 1.17033 0.77251 0.86159 1.15889 1.16532 0.80684 0.74672 0.89711 0.88583 0.77038 0.88905 0.90555 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.14 12.87 -35.23 -0.45 -0.59 15 2 C -0.01 0.00 2.99 36.00 0.11 0.11 15 3 Si 0.66 -0.38 31.05 -169.99 -5.28 -5.66 15 4 C -0.31 -0.26 5.74 -36.02 -0.21 -0.47 15 5 C 0.12 0.23 11.22 -19.14 -0.21 0.02 15 6 N -0.55 -1.63 9.83 -15.20 -0.15 -1.78 15 7 C 0.33 0.45 8.09 -87.68 -0.71 -0.26 15 8 N -0.68 0.38 5.51 -54.99 -0.30 0.08 15 9 C 0.14 -0.12 4.36 -67.12 -0.29 -0.41 15 10 H 0.12 0.02 7.67 -51.93 -0.40 -0.38 15 11 C -0.14 0.21 7.66 -25.92 -0.20 0.01 15 12 C 0.08 -0.11 5.21 -25.92 -0.14 -0.24 15 13 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 15 14 O -0.56 0.05 13.67 -35.23 -0.48 -0.44 15 15 C -0.18 0.18 7.71 -25.92 -0.20 -0.02 15 16 S 0.09 0.01 20.57 -107.50 -2.21 -2.20 15 17 H 0.38 -1.27 8.70 45.56 0.40 -0.87 15 18 H 0.12 0.01 7.96 -51.93 -0.41 -0.40 15 19 H -0.24 -0.48 7.11 56.52 0.40 -0.07 15 20 H -0.24 -0.40 7.11 56.52 0.40 0.00 15 21 H 0.18 0.15 8.06 -52.49 -0.42 -0.28 15 22 H 0.42 -1.03 8.85 -40.82 -0.36 -1.39 15 23 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 15 24 H 0.10 -0.13 8.12 -51.93 -0.42 -0.55 15 25 H 0.38 -1.49 9.12 45.56 0.42 -1.08 15 26 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 15 27 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 15 LS Contribution 251.75 15.07 3.79 3.79 Total: 0.00 -6.20 251.75 -9.03 -15.23 By element: Atomic # 1 Polarization: -5.09 SS G_CDS: -2.09 Total: -7.18 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -1.85 Total: -1.26 kcal Atomic # 7 Polarization: -1.24 SS G_CDS: -0.45 Total: -1.70 kcal Atomic # 8 Polarization: -0.09 SS G_CDS: -0.93 Total: -1.03 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.28 Total: -5.66 kcal Atomic # 16 Polarization: 0.01 SS G_CDS: -2.21 Total: -2.20 kcal Total LS contribution 3.79 Total: 3.79 kcal Total: -6.20 -9.03 -15.23 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10859624_15704118.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.424 kcal (2) G-P(sol) polarization free energy of solvation -6.203 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.220 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.230 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds