Wall clock time and date at job start Mon Mar 8 2021 03:25:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33334 * 125.95242 * 2 1 4 4 C 1.50698 * 122.70915 * 359.97438 * 3 2 1 5 5 O 1.42893 * 109.47263 * 329.99699 * 4 3 2 6 6 Si 1.86301 * 109.47104 * 209.99652 * 4 3 2 7 7 N 1.32117 * 114.57757 * 179.97438 * 3 2 1 8 8 C 1.29688 * 116.86809 * 0.02562 * 7 3 2 9 9 N 1.38618 * 124.94975 * 179.97438 * 8 7 3 10 10 C 1.46492 * 120.00100 * 179.97438 * 9 8 7 11 11 H 1.09008 * 112.84845 * 336.19694 * 10 9 8 12 12 C 1.53775 * 113.69101 * 107.46891 * 10 9 8 13 13 C 1.53779 * 87.08438 * 139.99340 * 12 10 9 14 14 H 1.09002 * 113.61731 * 89.11293 * 13 12 10 15 15 O 1.42898 * 113.68762 * 220.00851 * 13 12 10 16 16 C 1.53777 * 113.61596 * 205.00373 * 10 9 8 17 17 S 1.70965 * 110.10257 * 0.23957 * 8 7 3 18 18 H 1.08997 * 109.46956 * 89.99977 * 1 2 3 19 19 H 1.08997 * 109.47297 * 209.99975 * 1 2 3 20 20 H 1.09000 * 109.46812 * 330.00364 * 1 2 3 21 21 H 1.09004 * 109.47327 * 89.99594 * 4 3 2 22 22 H 0.96698 * 114.00298 * 179.97438 * 5 4 3 23 23 H 1.48500 * 109.99953 * 298.68417 * 6 4 3 24 24 H 1.48505 * 109.99736 * 59.99858 * 6 4 3 25 25 H 0.97005 * 119.99734 * 0.02562 * 9 8 7 26 26 H 1.08993 * 113.61636 * 25.43703 * 12 10 9 27 27 H 1.09008 * 113.61006 * 254.53946 * 12 10 9 28 28 H 0.96697 * 114.00154 * 279.05796 * 15 13 12 29 29 H 1.08997 * 113.61941 * 105.38208 * 16 10 9 30 30 H 1.09005 * 113.61136 * 334.48373 * 16 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7415 2.4830 -0.0006 5 8 0.4817 2.5020 -0.6747 6 14 2.9327 3.6147 -0.8786 7 7 3.5850 0.8188 0.0005 8 6 3.9315 -0.4310 0.0005 9 7 5.2385 -0.8927 0.0005 10 6 5.5066 -2.3329 0.0010 11 1 4.6805 -2.9171 0.4067 12 6 6.0350 -2.8635 -1.3421 13 6 6.9918 -3.7489 -0.5263 14 1 6.5718 -4.7201 -0.2648 15 8 8.3034 -3.8438 -1.0854 16 6 6.8747 -2.7046 0.5965 17 16 2.5413 -1.4261 -0.0070 18 1 -0.3633 0.0000 -1.0276 19 1 -0.3634 -0.8899 0.5138 20 1 -0.3633 0.8900 0.5138 21 1 1.6088 2.8217 1.0270 22 1 0.0691 3.3757 -0.7129 23 1 4.2371 3.6284 -0.1689 24 1 3.1221 3.1636 -2.2807 25 1 5.9756 -0.2621 0.0009 26 1 6.5431 -2.1075 -1.9408 27 1 5.2953 -3.4278 -1.9101 28 1 8.3778 -4.4822 -1.8078 29 1 6.8131 -3.1406 1.5936 30 1 7.6125 -1.9052 0.5279 There are 41 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 41 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10859624_15704122.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:25:23 Heat of formation + Delta-G solvation = -1.386587 kcal Electronic energy + Delta-G solvation = -15423.589475 eV Core-core repulsion = 12734.364631 eV Total energy + Delta-G solvation = -2689.224844 eV No. of doubly occupied orbitals = 41 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 243.072 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.11674 -40.53243 -37.79256 -36.83058 -34.71708 -32.41854 -29.25389 -27.02308 -25.83365 -25.16750 -23.89948 -21.51021 -19.96444 -19.45765 -18.76056 -18.01939 -17.31511 -16.82415 -16.25205 -16.12115 -15.66209 -15.43817 -14.85188 -14.07405 -14.04215 -13.88758 -13.70509 -13.66333 -13.36734 -13.00890 -12.83832 -12.59698 -12.04433 -11.90036 -11.68745 -11.08128 -11.00416 -10.59552 -10.28070 -9.97104 -8.59100 -4.80811 0.06086 0.18133 0.80135 1.40266 1.78057 1.91522 1.96733 2.38376 3.03035 3.10256 3.23825 3.38001 3.53221 3.65177 3.96898 4.07919 4.22615 4.40881 4.44978 4.49018 4.51685 4.69289 4.71546 4.88180 4.90903 4.96787 5.17862 5.38847 5.59973 6.24076 6.52321 6.63497 6.92578 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 C -0.226 4.226 3 C 0.099 3.901 4 C -0.036 4.036 5 O -0.544 6.544 6 Si 0.712 3.288 7 N -0.549 5.549 8 C 0.319 3.681 9 N -0.682 5.682 10 C 0.129 3.871 11 H 0.111 0.889 12 C -0.186 4.186 13 C 0.081 3.919 14 H 0.090 0.910 15 O -0.556 6.556 16 C -0.133 4.133 17 S 0.099 5.901 18 H 0.073 0.927 19 H 0.057 0.943 20 H 0.088 0.912 21 H 0.081 0.919 22 H 0.385 0.615 23 H -0.252 1.252 24 H -0.264 1.264 25 H 0.413 0.587 26 H 0.098 0.902 27 H 0.079 0.921 28 H 0.383 0.617 29 H 0.087 0.913 30 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.795 -0.827 0.511 2.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.348 4.348 3 C -0.029 4.029 4 C -0.148 4.148 5 O -0.350 6.350 6 Si 0.612 3.388 7 N -0.276 5.276 8 C -0.052 4.052 9 N -0.322 5.322 10 C 0.023 3.977 11 H 0.129 0.871 12 C -0.226 4.226 13 C 0.021 3.979 14 H 0.108 0.892 15 O -0.362 6.362 16 C -0.171 4.171 17 S 0.348 5.652 18 H 0.091 0.909 19 H 0.075 0.925 20 H 0.107 0.893 21 H 0.099 0.901 22 H 0.233 0.767 23 H -0.177 1.177 24 H -0.189 1.189 25 H 0.252 0.748 26 H 0.116 0.884 27 H 0.097 0.903 28 H 0.231 0.769 29 H 0.106 0.894 30 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.508 -1.814 0.484 1.945 hybrid contribution -0.068 0.002 -0.153 0.167 sum -0.576 -1.812 0.332 1.930 Atomic orbital electron populations 1.20105 0.86129 1.02492 1.02853 1.25176 1.01551 0.92308 1.15770 1.18943 0.86397 0.95125 1.02471 1.23957 0.93121 0.96221 1.01479 1.86462 1.33791 1.35715 1.79076 0.96196 0.78918 0.84573 0.79106 1.65706 1.17262 1.16881 1.27772 1.23265 0.91969 0.91261 0.98727 1.43901 1.01760 1.06478 1.80055 1.22348 0.97909 0.79739 0.97720 0.87080 1.24326 0.99900 1.00708 0.97664 1.23042 0.83351 0.97153 0.94320 0.89237 1.86525 1.29127 1.65849 1.54679 1.23447 0.95660 0.99218 0.98785 1.83872 0.96472 1.10652 1.74213 0.90873 0.92458 0.89335 0.90137 0.76664 1.17717 1.18910 0.74796 0.88382 0.90254 0.76912 0.89419 0.88174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.09 8.96 36.01 0.32 0.23 16 2 C -0.23 -0.85 6.50 -36.02 -0.23 -1.08 16 3 C 0.10 0.47 5.95 -84.18 -0.50 -0.03 16 4 C -0.04 -0.06 2.81 36.00 0.10 0.04 16 5 O -0.54 -0.03 9.86 -35.23 -0.35 -0.38 16 6 Si 0.71 1.09 32.08 -169.99 -5.45 -4.37 16 7 N -0.55 -3.15 8.95 -11.36 -0.10 -3.25 16 8 C 0.32 1.21 8.24 -87.67 -0.72 0.48 16 9 N -0.68 -0.92 5.51 -55.00 -0.30 -1.22 16 10 C 0.13 -0.12 4.22 -67.13 -0.28 -0.40 16 11 H 0.11 -0.17 7.06 -51.92 -0.37 -0.54 16 12 C -0.19 0.23 7.71 -25.92 -0.20 0.03 16 13 C 0.08 -0.13 5.21 -25.92 -0.14 -0.27 16 14 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 15 O -0.56 0.09 13.67 -35.23 -0.48 -0.39 16 16 C -0.13 0.18 7.66 -25.92 -0.20 -0.02 16 17 S 0.10 0.24 21.69 -107.50 -2.33 -2.09 16 18 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 19 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 20 H 0.09 0.10 6.62 -51.93 -0.34 -0.25 16 21 H 0.08 0.00 7.96 -51.93 -0.41 -0.42 16 22 H 0.39 -1.97 8.74 45.56 0.40 -1.57 16 23 H -0.25 -1.29 7.11 56.52 0.40 -0.88 16 24 H -0.26 -1.51 7.11 56.52 0.40 -1.11 16 25 H 0.41 0.40 8.85 -40.82 -0.36 0.04 16 26 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 27 H 0.08 -0.14 8.14 -51.92 -0.42 -0.57 16 28 H 0.38 -1.56 9.12 45.56 0.42 -1.15 16 29 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.10 -0.06 8.12 -51.93 -0.42 -0.48 16 LS Contribution 268.59 15.07 4.05 4.05 Total: 0.00 -8.38 268.59 -9.65 -18.03 By element: Atomic # 1 Polarization: -6.54 SS G_CDS: -2.83 Total: -9.37 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -1.85 Total: -1.01 kcal Atomic # 7 Polarization: -4.07 SS G_CDS: -0.40 Total: -4.47 kcal Atomic # 8 Polarization: 0.06 SS G_CDS: -0.83 Total: -0.77 kcal Atomic # 14 Polarization: 1.09 SS G_CDS: -5.45 Total: -4.37 kcal Atomic # 16 Polarization: 0.24 SS G_CDS: -2.33 Total: -2.09 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -8.38 -9.65 -18.03 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10859624_15704122.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.643 kcal (2) G-P(sol) polarization free energy of solvation -8.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.263 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.649 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.030 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds