Wall clock time and date at job start Mon Mar 8 2021 03:25:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47093 * 2 1 4 4 C 1.50706 * 109.47047 * 120.00037 * 2 1 3 5 5 C 1.37984 * 120.32371 * 245.00534 * 4 2 1 6 6 N 1.32016 * 120.89991 * 179.97438 * 5 4 2 7 7 C 1.32331 * 121.64557 * 0.02562 * 6 5 4 8 8 N 1.39140 * 119.71745 * 180.02562 * 7 6 5 9 9 C 1.46494 * 120.00119 * 359.97438 * 8 7 6 10 10 H 1.09005 * 112.85190 * 23.79656 * 9 8 7 11 11 C 1.53788 * 113.61770 * 154.99662 * 9 8 7 12 12 C 1.53782 * 87.08216 * 139.98224 * 11 9 8 13 13 H 1.08995 * 113.61824 * 89.11286 * 12 11 9 14 14 O 1.42905 * 113.61160 * 219.93872 * 12 11 9 15 15 C 1.53787 * 87.08210 * 334.56694 * 12 11 9 16 16 C 1.39341 * 120.56512 * 0.02562 * 7 6 5 17 17 F 1.35104 * 120.47316 * 180.02562 * 16 7 6 18 18 C 1.38452 * 119.05647 * 0.27083 * 16 7 6 19 19 H 0.96703 * 114.00061 * 299.99986 * 1 2 3 20 20 H 1.08995 * 109.47524 * 239.99689 * 2 1 3 21 21 H 1.48500 * 110.00146 * 178.67708 * 3 2 1 22 22 H 1.48500 * 110.00191 * 300.00152 * 3 2 1 23 23 H 1.08004 * 119.55003 * 0.02562 * 5 4 2 24 24 H 0.97005 * 120.00184 * 179.97438 * 8 7 6 25 25 H 1.09001 * 113.61372 * 254.52771 * 11 9 8 26 26 H 1.09000 * 113.61320 * 25.34700 * 11 9 8 27 27 H 0.96700 * 113.99385 * 180.02562 * 14 12 11 28 28 H 1.09002 * 113.61767 * 270.88971 * 15 12 11 29 29 H 1.08997 * 113.61576 * 139.98445 * 15 12 11 30 30 H 1.08001 * 120.75389 * 179.72916 * 18 16 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6381 -0.0201 2.1938 6 7 3.0829 -0.6309 3.2763 7 6 2.8721 -1.9211 3.4816 8 7 3.3588 -2.5242 4.6373 9 6 4.1014 -1.7314 5.6202 10 1 3.8674 -0.6680 5.5702 11 6 4.0466 -2.3079 7.0448 12 6 5.5299 -1.9231 7.1731 13 1 5.6879 -0.9118 7.5478 14 8 6.3171 -2.8985 7.8596 15 6 5.6095 -2.0318 5.6412 16 6 2.1670 -2.6809 2.5504 17 9 1.9524 -3.9978 2.7622 18 6 1.6938 -2.0681 1.4026 19 1 -0.3933 0.4417 0.7651 20 1 1.7924 -0.5138 -0.8899 21 1 3.5346 1.7703 0.0322 22 1 1.5615 2.4679 -1.2085 23 1 2.8292 1.0345 2.0608 24 1 3.2063 -3.4696 4.7921 25 1 3.3917 -1.7521 7.7159 26 1 3.8689 -3.3830 7.0743 27 1 7.2509 -2.6618 7.9438 28 1 5.8605 -3.0316 5.2868 29 1 6.2163 -1.2532 5.1791 30 1 1.1477 -2.6318 0.6606 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10859624_17656566.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:25:26 Heat of formation + Delta-G solvation = -50.830765 kcal Electronic energy + Delta-G solvation = -17050.954914 eV Core-core repulsion = 13956.517407 eV Total energy + Delta-G solvation = -3094.437507 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 241.090 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -49.87175 -41.50741 -40.37114 -38.05620 -36.72557 -34.77495 -33.19011 -31.17147 -26.92203 -26.76737 -25.63607 -23.96491 -22.86625 -21.00818 -19.24146 -19.06073 -18.39310 -18.10253 -17.52625 -16.95598 -16.58713 -16.13656 -16.06402 -15.76749 -15.37858 -15.19723 -14.49145 -14.34133 -14.11856 -13.73142 -13.58602 -13.47286 -12.86323 -12.62887 -12.35720 -12.12217 -11.82049 -11.23361 -10.91149 -10.70531 -10.67033 -10.47567 -8.78332 -5.11026 -0.08505 0.10142 1.20671 1.56783 1.91744 1.91997 2.52519 3.02165 3.12417 3.30924 3.39920 3.40785 3.56455 3.58970 3.75931 3.82006 3.83940 3.98952 4.37849 4.39091 4.47830 4.64205 4.65159 4.68257 4.85288 4.89626 4.96250 5.08369 5.41404 5.92705 6.15369 6.51020 6.61348 6.92337 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.684 3.316 4 C -0.210 4.210 5 C 0.149 3.851 6 N -0.513 5.513 7 C 0.391 3.609 8 N -0.704 5.704 9 C 0.138 3.862 10 H 0.124 0.876 11 C -0.140 4.140 12 C 0.080 3.920 13 H 0.088 0.912 14 O -0.558 6.558 15 C -0.185 4.185 16 C -0.020 4.020 17 F -0.133 7.133 18 C -0.037 4.037 19 H 0.380 0.620 20 H 0.115 0.885 21 H -0.254 1.254 22 H -0.251 1.251 23 H 0.163 0.837 24 H 0.414 0.586 25 H 0.083 0.917 26 H 0.094 0.906 27 H 0.381 0.619 28 H 0.091 0.909 29 H 0.075 0.925 30 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.582 3.135 1.971 3.749 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.166 4.166 3 Si 0.586 3.414 4 C -0.215 4.215 5 C -0.008 4.008 6 N -0.230 5.230 7 C 0.153 3.847 8 N -0.336 5.336 9 C 0.032 3.968 10 H 0.142 0.858 11 C -0.178 4.178 12 C 0.020 3.980 13 H 0.106 0.894 14 O -0.364 6.364 15 C -0.224 4.224 16 C -0.047 4.047 17 F -0.112 7.112 18 C -0.063 4.063 19 H 0.227 0.773 20 H 0.133 0.867 21 H -0.179 1.179 22 H -0.176 1.176 23 H 0.180 0.820 24 H 0.251 0.749 25 H 0.102 0.898 26 H 0.113 0.887 27 H 0.229 0.771 28 H 0.110 0.890 29 H 0.094 0.906 30 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 1.131 3.645 1.792 4.216 hybrid contribution 0.112 -1.503 -0.774 1.694 sum 1.242 2.143 1.018 2.678 Atomic orbital electron populations 1.86518 1.17056 1.81682 1.49289 1.24863 0.85245 1.09924 0.96617 0.94897 0.81137 0.77590 0.87807 1.20928 1.05768 0.94608 1.00238 1.22315 0.91648 0.99209 0.87636 1.67262 1.25000 1.07316 1.23374 1.18447 0.90245 0.88979 0.87050 1.44542 1.58809 1.11892 1.18366 1.22222 0.90637 0.97276 0.86617 0.85829 1.23501 0.95332 1.02987 0.95984 1.23070 0.91884 0.92275 0.90770 0.89425 1.86524 1.24306 1.46533 1.79037 1.24248 0.97480 1.03381 0.97298 1.18010 1.08701 0.79595 0.98355 1.91498 1.93633 1.31181 1.94900 1.21294 0.95512 0.94454 0.95069 0.77291 0.86748 1.17870 1.17570 0.82000 0.74879 0.89808 0.88723 0.77103 0.89047 0.90583 0.83307 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.31 12.85 -35.23 -0.45 -0.15 16 2 C -0.05 0.06 2.82 36.01 0.10 0.16 16 3 Si 0.68 -1.42 29.83 -169.99 -5.07 -6.49 16 4 C -0.21 0.08 5.36 -104.47 -0.56 -0.48 16 5 C 0.15 -0.05 9.84 -17.57 -0.17 -0.23 16 6 N -0.51 -0.70 9.13 -12.37 -0.11 -0.81 16 7 C 0.39 0.63 7.49 -154.87 -1.16 -0.53 16 8 N -0.70 -0.20 5.51 -53.06 -0.29 -0.50 16 9 C 0.14 -0.09 4.27 -67.11 -0.29 -0.38 16 10 H 0.12 -0.06 7.41 -51.93 -0.38 -0.45 16 11 C -0.14 0.14 7.66 -25.91 -0.20 -0.06 16 12 C 0.08 -0.09 5.21 -25.92 -0.14 -0.22 16 13 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 14 O -0.56 -0.15 13.67 -35.23 -0.48 -0.63 16 15 C -0.18 0.14 7.71 -25.91 -0.20 -0.06 16 16 C -0.02 -0.04 7.35 -39.09 -0.29 -0.32 16 17 F -0.13 -0.33 16.65 2.25 0.04 -0.29 16 18 C -0.04 -0.03 9.83 -39.26 -0.39 -0.41 16 19 H 0.38 -1.67 8.70 45.56 0.40 -1.27 16 20 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 21 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 22 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 23 H 0.16 -0.47 4.91 -52.48 -0.26 -0.73 16 24 H 0.41 -0.19 8.20 -40.82 -0.33 -0.52 16 25 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 26 H 0.09 -0.04 8.12 -51.93 -0.42 -0.46 16 27 H 0.38 -1.40 9.12 45.56 0.42 -0.98 16 28 H 0.09 0.03 8.14 -51.93 -0.42 -0.40 16 29 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.15 -0.02 8.06 -52.49 -0.42 -0.44 16 LS Contribution 264.41 15.07 3.98 3.98 Total: 0.00 -6.47 264.41 -7.98 -14.45 By element: Atomic # 1 Polarization: -4.73 SS G_CDS: -2.31 Total: -7.04 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -3.28 Total: -2.53 kcal Atomic # 7 Polarization: -0.90 SS G_CDS: -0.41 Total: -1.31 kcal Atomic # 8 Polarization: 0.16 SS G_CDS: -0.93 Total: -0.78 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.07 Total: -6.49 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -6.47 -7.98 -14.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10859624_17656566.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.383 kcal (2) G-P(sol) polarization free energy of solvation -6.465 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.448 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds