Wall clock time and date at job start Mon Mar 8 2021 03:35:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86297 * 109.47285 * 2 1 4 4 C 1.50696 * 109.47085 * 120.00388 * 2 1 3 5 5 C 1.38606 * 120.72128 * 64.99870 * 4 2 1 6 6 N 1.32279 * 119.19607 * 180.02562 * 5 4 2 7 7 C 1.32494 * 120.73978 * 359.97438 * 6 5 4 8 8 N 1.38405 * 119.21739 * 180.02562 * 7 6 5 9 9 C 1.46498 * 120.00241 * 179.72746 * 8 7 6 10 10 H 1.09002 * 112.84888 * 336.19145 * 9 8 7 11 11 C 1.53786 * 113.61854 * 107.50109 * 9 8 7 12 12 C 1.53781 * 87.07959 * 89.11701 * 11 9 8 13 13 H 1.09006 * 113.61519 * 270.88270 * 12 11 9 14 14 C 1.50697 * 113.68993 * 139.99628 * 12 11 9 15 15 C 1.38248 * 119.96936 * 322.46214 * 14 12 11 16 16 C 1.38286 * 120.10906 * 180.02562 * 15 14 12 17 17 C 1.38121 * 120.05690 * 359.97438 * 16 15 14 18 18 C 1.38752 * 119.94614 * 359.97438 * 17 16 15 19 19 O 1.35900 * 120.05758 * 180.02562 * 18 17 16 20 20 C 1.42898 * 116.99891 * 359.97438 * 19 18 17 21 21 F 1.39903 * 109.47187 * 60.00363 * 20 19 18 22 22 F 1.39903 * 109.46932 * 180.02562 * 20 19 18 23 23 F 1.39899 * 109.47269 * 300.00131 * 20 19 18 24 24 C 1.38165 * 119.97287 * 142.18517 * 14 12 11 25 25 C 1.53779 * 87.08411 * 25.43382 * 12 11 9 26 26 N 1.32494 * 121.56775 * 0.27451 * 7 6 5 27 27 C 1.32277 * 120.73841 * 359.44675 * 26 7 6 28 28 H 0.96701 * 114.00018 * 59.99846 * 1 2 3 29 29 H 1.08997 * 109.47084 * 240.00155 * 2 1 3 30 30 H 1.48507 * 109.99764 * 59.99890 * 3 2 1 31 31 H 1.48502 * 110.00077 * 181.31856 * 3 2 1 32 32 H 1.07993 * 120.40359 * 0.02562 * 5 4 2 33 33 H 0.97005 * 119.99811 * 0.02562 * 8 7 6 34 34 H 1.09001 * 113.61511 * 203.66497 * 11 9 8 35 35 H 1.09003 * 113.60825 * 334.56960 * 11 9 8 36 36 H 1.07998 * 119.94500 * 359.97438 * 15 14 12 37 37 H 1.08001 * 119.97389 * 179.97438 * 16 15 14 38 38 H 1.08002 * 120.02772 * 180.02562 * 17 16 15 39 39 H 1.08000 * 120.03066 * 0.02562 * 24 14 12 40 40 H 1.09003 * 113.61795 * 220.01939 * 25 12 11 41 41 H 1.08997 * 113.61636 * 89.11348 * 25 12 11 42 42 H 1.08000 * 120.40172 * 180.25460 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6925 -2.0634 1.4139 6 7 2.1469 -2.6566 2.5054 7 6 2.8232 -1.9724 3.4164 8 7 3.2846 -2.6249 4.5465 9 6 4.0394 -1.8864 5.5619 10 1 4.5229 -0.9941 5.1641 11 6 3.2483 -1.6355 6.8565 12 6 3.7916 -2.9843 7.3569 13 1 3.1622 -3.8340 7.0922 14 6 4.1831 -2.9770 8.8121 15 6 4.7805 -1.8576 9.3610 16 6 5.1414 -1.8480 10.6959 17 6 4.9052 -2.9571 11.4844 18 6 4.3049 -4.0815 10.9361 19 8 4.0710 -5.1739 11.7100 20 6 4.4696 -5.0958 13.0800 21 9 3.7928 -4.0419 13.7032 22 9 4.1580 -6.2972 13.7256 23 9 5.8487 -4.8720 13.1525 24 6 3.9396 -4.0870 9.5980 25 6 4.9762 -2.7732 6.3992 26 7 3.0642 -0.6775 3.2737 27 6 2.6425 -0.0252 2.2029 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5615 2.4678 1.2086 31 1 3.5346 1.7702 -0.0321 32 1 1.1422 -2.6265 0.6747 33 1 3.1118 -3.5722 4.6641 34 1 3.6076 -0.7805 7.4291 35 1 2.1678 -1.6263 6.7129 36 1 4.9663 -0.9895 8.7460 37 1 5.6082 -0.9724 11.1223 38 1 5.1869 -2.9490 12.5270 39 1 3.4692 -4.9598 9.1697 40 1 5.2907 -3.6823 5.8866 41 1 5.8079 -2.2291 6.8468 42 1 2.8456 1.0295 2.0902 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10860232_12175864.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:35:17 Heat of formation + Delta-G solvation = -101.428062 kcal Electronic energy + Delta-G solvation = -31704.638836 eV Core-core repulsion = 26624.155984 eV Total energy + Delta-G solvation = -5080.482852 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.113 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -51.45094 -49.16240 -49.05096 -42.18966 -41.61757 -40.53027 -38.52497 -37.90680 -35.59221 -34.72339 -32.75557 -31.95518 -31.10107 -27.30508 -26.98426 -26.77906 -26.13679 -25.52068 -23.96856 -23.25405 -22.88363 -21.05109 -20.17133 -20.06688 -19.94006 -19.53786 -18.58699 -18.30295 -17.96289 -17.18258 -16.77287 -16.66558 -16.31599 -16.26539 -16.15991 -15.92807 -15.80970 -15.63391 -15.53474 -15.45424 -15.27217 -15.22641 -15.16286 -14.99408 -14.78705 -14.49015 -14.28473 -14.05312 -14.03381 -13.68810 -13.21229 -13.08936 -12.87495 -12.80367 -12.27688 -12.04298 -11.94696 -11.85687 -11.78608 -11.45118 -11.19189 -10.61085 -9.99520 -9.98045 -9.62967 -9.14166 -5.08410 0.01696 0.05431 0.13441 0.16672 0.43681 1.18634 1.55409 1.71303 1.80443 1.86060 2.43527 2.74574 2.74750 2.96764 3.04838 3.30941 3.34265 3.46950 3.52901 3.55060 3.57036 3.67187 3.77070 3.83667 3.85957 3.92804 4.07433 4.08146 4.16553 4.33758 4.43762 4.51537 4.58371 4.65964 4.69920 4.77897 4.85478 4.91212 4.94712 4.98432 5.18864 5.26357 5.28528 5.45816 5.75906 5.82164 5.97054 6.35558 6.55823 7.25557 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.051 4.051 3 Si 0.680 3.320 4 C -0.247 4.247 5 C 0.227 3.773 6 N -0.567 5.567 7 C 0.570 3.430 8 N -0.677 5.677 9 C 0.135 3.865 10 H 0.111 0.889 11 C -0.144 4.144 12 C -0.075 4.075 13 H 0.101 0.899 14 C -0.034 4.034 15 C -0.133 4.133 16 C -0.074 4.074 17 C -0.194 4.194 18 C 0.107 3.893 19 O -0.311 6.311 20 C 0.604 3.396 21 F -0.164 7.164 22 F -0.130 7.130 23 F -0.164 7.164 24 C -0.121 4.121 25 C -0.136 4.136 26 N -0.559 5.559 27 C 0.194 3.806 28 H 0.384 0.616 29 H 0.076 0.924 30 H -0.249 1.249 31 H -0.252 1.252 32 H 0.173 0.827 33 H 0.416 0.584 34 H 0.098 0.902 35 H 0.076 0.924 36 H 0.133 0.867 37 H 0.135 0.865 38 H 0.133 0.867 39 H 0.138 0.862 40 H 0.079 0.921 41 H 0.102 0.898 42 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.391 3.276 -5.116 6.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.163 4.163 3 Si 0.581 3.419 4 C -0.255 4.255 5 C 0.059 3.941 6 N -0.288 5.288 7 C 0.213 3.787 8 N -0.313 5.313 9 C 0.029 3.971 10 H 0.129 0.871 11 C -0.183 4.183 12 C -0.094 4.094 13 H 0.120 0.880 14 C -0.034 4.034 15 C -0.151 4.151 16 C -0.092 4.092 17 C -0.213 4.213 18 C 0.065 3.935 19 O -0.231 6.231 20 C 0.514 3.486 21 F -0.146 7.146 22 F -0.111 7.111 23 F -0.146 7.146 24 C -0.139 4.139 25 C -0.174 4.174 26 N -0.281 5.281 27 C 0.027 3.973 28 H 0.232 0.768 29 H 0.094 0.906 30 H -0.173 1.173 31 H -0.177 1.177 32 H 0.190 0.810 33 H 0.254 0.746 34 H 0.116 0.884 35 H 0.094 0.906 36 H 0.151 0.849 37 H 0.153 0.847 38 H 0.151 0.849 39 H 0.156 0.844 40 H 0.098 0.902 41 H 0.121 0.879 42 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 1.347 2.997 -3.146 4.549 hybrid contribution -0.292 -0.560 -0.013 0.631 sum 1.055 2.437 -3.160 4.128 Atomic orbital electron populations 1.86494 1.17267 1.81826 1.49838 1.24303 0.85629 1.09997 0.96360 0.95038 0.80952 0.78141 0.87749 1.20730 1.07832 0.97052 0.99907 1.22837 0.88829 0.90865 0.91599 1.67988 1.16480 1.39976 1.04359 1.19317 0.87103 0.85450 0.86799 1.43792 1.58106 1.11832 1.17587 1.21842 0.92365 0.96028 0.86871 0.87144 1.23624 1.01392 0.96822 0.96439 1.21653 0.98315 0.99598 0.89799 0.88033 1.19502 0.96408 0.92591 0.94895 1.21097 1.00183 0.98520 0.95312 1.20975 0.97348 0.97395 0.93470 1.21562 1.04140 0.94066 1.01518 1.18679 0.99272 0.84834 0.90707 1.86425 1.78718 1.39671 1.18301 1.19339 0.74879 0.74742 0.79660 1.93312 1.80319 1.57750 1.83258 1.93329 1.92983 1.45181 1.79638 1.93310 1.31096 1.94290 1.95950 1.20307 1.03681 1.00145 0.89788 1.23473 0.96797 1.00892 0.96202 1.67890 1.27209 1.08393 1.24641 1.22623 0.89097 0.98904 0.86695 0.76838 0.90579 1.17308 1.17701 0.81016 0.74635 0.88355 0.90574 0.84950 0.84741 0.84888 0.84427 0.90190 0.87950 0.82520 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.54 12.82 -35.23 -0.45 0.09 16 2 C -0.05 0.07 2.82 36.00 0.10 0.17 16 3 Si 0.68 -1.49 29.92 -169.99 -5.09 -6.58 16 4 C -0.25 -0.42 5.40 -104.35 -0.56 -0.98 16 5 C 0.23 0.46 10.99 -17.22 -0.19 0.27 16 6 N -0.57 -1.99 10.46 -13.93 -0.15 -2.14 16 7 C 0.57 1.88 8.43 -322.81 -2.72 -0.84 16 8 N -0.68 -0.45 5.41 -55.00 -0.30 -0.74 16 9 C 0.14 -0.11 4.33 -67.11 -0.29 -0.40 16 10 H 0.11 0.02 7.37 -51.93 -0.38 -0.36 16 11 C -0.14 0.19 7.25 -25.92 -0.19 0.00 16 12 C -0.08 0.14 3.85 -90.96 -0.35 -0.21 16 13 H 0.10 -0.22 8.09 -51.93 -0.42 -0.64 16 14 C -0.03 0.02 5.29 -104.65 -0.55 -0.54 16 15 C -0.13 0.12 8.61 -39.56 -0.34 -0.22 16 16 C -0.07 0.03 10.04 -39.61 -0.40 -0.37 16 17 C -0.19 -0.20 8.26 -39.43 -0.33 -0.52 16 18 C 0.11 0.19 6.48 -39.22 -0.25 -0.06 16 19 O -0.31 -0.71 10.37 -19.42 -0.20 -0.91 16 20 C 0.60 0.94 3.42 101.05 0.35 1.29 16 21 F -0.16 -0.26 15.56 2.25 0.04 -0.23 16 22 F -0.13 -0.23 17.53 2.25 0.04 -0.19 16 23 F -0.16 -0.25 15.56 2.25 0.04 -0.21 16 24 C -0.12 -0.07 9.65 -39.43 -0.38 -0.46 16 25 C -0.14 0.31 7.29 -25.92 -0.19 0.12 16 26 N -0.56 -2.06 9.13 -13.93 -0.13 -2.19 16 27 C 0.19 0.52 9.92 -17.22 -0.17 0.35 16 28 H 0.38 -2.29 8.74 45.56 0.40 -1.89 16 29 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 30 H -0.25 -0.23 7.06 56.52 0.40 0.17 16 31 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 32 H 0.17 -0.07 8.06 -52.49 -0.42 -0.50 16 33 H 0.42 -0.24 8.82 -40.82 -0.36 -0.60 16 34 H 0.10 -0.20 6.32 -51.93 -0.33 -0.53 16 35 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.13 -0.37 6.66 -52.49 -0.35 -0.72 16 37 H 0.13 -0.32 8.06 -52.49 -0.42 -0.74 16 38 H 0.13 0.07 5.10 -52.49 -0.27 -0.20 16 39 H 0.14 -0.08 8.05 -52.49 -0.42 -0.50 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.10 -0.28 7.72 -51.93 -0.40 -0.69 16 42 H 0.16 0.21 5.04 -52.49 -0.26 -0.06 16 LS Contribution 365.25 15.07 5.50 5.50 Total: 0.00 -7.31 365.25 -11.26 -18.57 By element: Atomic # 1 Polarization: -4.47 SS G_CDS: -4.10 Total: -8.58 kcal Atomic # 6 Polarization: 4.07 SS G_CDS: -6.47 Total: -2.40 kcal Atomic # 7 Polarization: -4.50 SS G_CDS: -0.57 Total: -5.07 kcal Atomic # 8 Polarization: -0.17 SS G_CDS: -0.65 Total: -0.83 kcal Atomic # 9 Polarization: -0.74 SS G_CDS: 0.11 Total: -0.63 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.09 Total: -6.58 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -7.31 -11.26 -18.57 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10860232_12175864.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.854 kcal (2) G-P(sol) polarization free energy of solvation -7.310 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds