Wall clock time and date at job start Mon Mar 8 2021 03:35:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86309 * 109.46659 * 2 1 4 4 C 1.50695 * 109.47214 * 240.00383 * 2 1 3 5 5 C 1.38017 * 120.33881 * 120.01806 * 4 2 1 6 6 N 1.31974 * 120.85711 * 179.70093 * 5 4 2 7 7 C 1.32397 * 121.62211 * 0.56641 * 6 5 4 8 8 N 1.39002 * 119.70384 * 179.71312 * 7 6 5 9 9 C 1.46501 * 119.99515 * 179.72893 * 8 7 6 10 10 H 1.08993 * 112.91182 * 336.24797 * 9 8 7 11 11 C 1.53778 * 113.61560 * 107.50148 * 9 8 7 12 12 C 1.53778 * 87.08449 * 89.11214 * 11 9 8 13 13 H 1.08998 * 113.61879 * 270.88747 * 12 11 9 14 14 C 1.50698 * 113.69240 * 139.98944 * 12 11 9 15 15 C 1.38244 * 119.97225 * 322.46970 * 14 12 11 16 16 C 1.38289 * 120.10897 * 179.97438 * 15 14 12 17 17 C 1.38120 * 120.05907 * 359.97438 * 16 15 14 18 18 C 1.38762 * 119.94308 * 359.97438 * 17 16 15 19 19 O 1.35897 * 120.05425 * 180.02562 * 18 17 16 20 20 C 1.42902 * 117.00191 * 0.02562 * 19 18 17 21 21 F 1.39902 * 109.46986 * 59.99366 * 20 19 18 22 22 F 1.39903 * 109.47026 * 179.97438 * 20 19 18 23 23 F 1.39902 * 109.46908 * 299.99583 * 20 19 18 24 24 C 1.38174 * 119.97159 * 142.19012 * 14 12 11 25 25 C 1.53784 * 113.61123 * 204.99739 * 9 8 7 26 26 C 1.39140 * 120.58807 * 359.43385 * 7 6 5 27 27 C 1.38303 * 119.09314 * 0.27860 * 26 7 6 28 28 H 0.96695 * 114.00475 * 59.99734 * 1 2 3 29 29 H 1.08992 * 109.47238 * 119.99395 * 2 1 3 30 30 H 1.48493 * 110.00044 * 60.00141 * 3 2 1 31 31 H 1.48503 * 109.99709 * 181.31963 * 3 2 1 32 32 H 1.08002 * 119.56996 * 359.97438 * 5 4 2 33 33 H 0.96998 * 120.00226 * 359.72363 * 8 7 6 34 34 H 1.08999 * 113.61526 * 334.56550 * 11 9 8 35 35 H 1.08999 * 113.69218 * 203.67174 * 11 9 8 36 36 H 1.07992 * 119.94489 * 359.97438 * 15 14 12 37 37 H 1.08001 * 119.97398 * 179.97438 * 16 15 14 38 38 H 1.08000 * 120.03335 * 179.97438 * 17 16 15 39 39 H 1.08004 * 120.02602 * 0.02562 * 24 14 12 40 40 H 1.09004 * 113.61451 * 156.33708 * 25 9 8 41 41 H 1.08994 * 113.61477 * 25.43010 * 25 9 8 42 42 H 1.08000 * 120.45225 * 180.29526 * 26 7 6 43 43 H 1.08004 * 120.74507 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7256 -0.0463 -2.1433 6 7 3.1759 -0.6601 -3.2213 7 6 2.8779 -1.9248 -3.4756 8 7 3.3692 -2.5303 -4.6264 9 6 3.0483 -3.9311 -4.9110 10 1 2.7942 -4.4985 -4.0158 11 6 2.0429 -4.1114 -6.0606 12 6 3.2527 -4.1402 -7.0095 13 1 3.5474 -3.1552 -7.3713 14 6 3.1314 -5.1575 -8.1146 15 6 2.5473 -6.3848 -7.8625 16 6 2.4341 -7.3202 -8.8747 17 6 2.9041 -7.0300 -10.1407 18 6 3.4898 -5.7984 -10.3966 19 8 3.9525 -5.5103 -11.6414 20 6 3.8028 -6.5220 -12.6395 21 9 2.4455 -6.8192 -12.8023 22 9 4.3279 -6.0622 -13.8520 23 9 4.4881 -7.6749 -12.2413 24 6 3.5989 -4.8605 -9.3805 25 6 4.0820 -4.6293 -5.8103 26 6 2.0821 -2.6549 -2.5983 27 6 1.6001 -2.0399 -1.4571 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5137 0.8900 30 1 1.5614 2.4679 1.2084 31 1 3.5345 1.7705 -0.0321 32 1 2.9855 0.9877 -1.9709 33 1 3.9243 -2.0253 -5.2409 34 1 1.3913 -3.2505 -6.2099 35 1 1.4967 -5.0538 -6.0209 36 1 2.1788 -6.6135 -6.8735 37 1 1.9777 -8.2785 -8.6753 38 1 2.8158 -7.7610 -10.9308 39 1 4.0514 -3.8999 -9.5780 40 1 4.0941 -5.7138 -5.7011 41 1 5.0766 -4.1865 -5.7575 42 1 1.8443 -3.6878 -2.8055 43 1 0.9798 -2.5813 -0.7582 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10860232_13915762.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:35:22 Heat of formation + Delta-G solvation = -120.145217 kcal Electronic energy + Delta-G solvation = -31538.948334 eV Core-core repulsion = 26523.079757 eV Total energy + Delta-G solvation = -5015.868577 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.118 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -51.46859 -49.17963 -49.06935 -41.89792 -41.34327 -40.47279 -38.55349 -37.80628 -35.36985 -33.41435 -32.44674 -31.59103 -30.78534 -27.31266 -26.94983 -26.75641 -25.78705 -24.76335 -23.99647 -23.19545 -22.56044 -20.95745 -20.18960 -20.07629 -19.86803 -18.93396 -18.45099 -17.95258 -17.45181 -17.21451 -16.69853 -16.52180 -16.31057 -16.25376 -16.05719 -15.97449 -15.82217 -15.56623 -15.47437 -15.42732 -15.27108 -15.23866 -15.16556 -14.87093 -14.57228 -14.30549 -14.19855 -14.05290 -14.02419 -13.72558 -13.35957 -13.12039 -12.91463 -12.82481 -12.38727 -12.01648 -11.99009 -11.95887 -11.49986 -11.13299 -10.74461 -10.40332 -10.39296 -10.02620 -9.65892 -8.74597 -5.03795 0.01763 0.13422 0.22555 0.40960 0.41582 1.30610 1.62538 1.78490 1.94701 1.98125 2.40281 2.72657 2.82594 2.94820 3.22148 3.39919 3.45732 3.48492 3.52326 3.57344 3.69181 3.75768 3.77884 3.88154 3.94902 4.03212 4.05834 4.11501 4.28688 4.32076 4.36382 4.50654 4.52665 4.61223 4.71012 4.72497 4.80512 4.84062 4.91652 4.95545 5.01389 5.16038 5.25325 5.30298 5.41635 5.50900 5.79117 5.96845 6.47714 6.58418 7.13163 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.682 3.318 4 C -0.235 4.235 5 C 0.156 3.844 6 N -0.539 5.539 7 C 0.410 3.590 8 N -0.705 5.705 9 C 0.129 3.871 10 H 0.101 0.899 11 C -0.148 4.148 12 C -0.073 4.073 13 H 0.102 0.898 14 C -0.035 4.035 15 C -0.134 4.134 16 C -0.074 4.074 17 C -0.194 4.194 18 C 0.108 3.892 19 O -0.311 6.311 20 C 0.604 3.396 21 F -0.164 7.164 22 F -0.130 7.130 23 F -0.164 7.164 24 C -0.121 4.121 25 C -0.135 4.135 26 C -0.238 4.238 27 C -0.006 4.006 28 H 0.379 0.621 29 H 0.112 0.888 30 H -0.253 1.253 31 H -0.256 1.256 32 H 0.155 0.845 33 H 0.407 0.593 34 H 0.079 0.921 35 H 0.098 0.902 36 H 0.132 0.868 37 H 0.135 0.865 38 H 0.133 0.867 39 H 0.138 0.862 40 H 0.101 0.899 41 H 0.080 0.920 42 H 0.135 0.865 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.448 -1.271 0.242 1.942 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.584 3.416 4 C -0.240 4.240 5 C -0.002 4.002 6 N -0.256 5.256 7 C 0.174 3.826 8 N -0.337 5.337 9 C 0.022 3.978 10 H 0.119 0.881 11 C -0.187 4.187 12 C -0.092 4.092 13 H 0.120 0.880 14 C -0.035 4.035 15 C -0.152 4.152 16 C -0.092 4.092 17 C -0.213 4.213 18 C 0.066 3.934 19 O -0.231 6.231 20 C 0.514 3.486 21 F -0.146 7.146 22 F -0.111 7.111 23 F -0.146 7.146 24 C -0.139 4.139 25 C -0.173 4.173 26 C -0.262 4.262 27 C -0.031 4.031 28 H 0.226 0.774 29 H 0.129 0.871 30 H -0.178 1.178 31 H -0.181 1.181 32 H 0.172 0.828 33 H 0.243 0.757 34 H 0.097 0.903 35 H 0.116 0.884 36 H 0.150 0.850 37 H 0.153 0.847 38 H 0.151 0.849 39 H 0.156 0.844 40 H 0.120 0.880 41 H 0.099 0.901 42 H 0.153 0.847 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -0.308 -0.588 0.521 0.844 hybrid contribution -0.183 -1.206 -0.020 1.220 sum -0.491 -1.794 0.501 1.926 Atomic orbital electron populations 1.86488 1.17334 1.81666 1.49293 1.24780 0.85014 1.09662 0.96957 0.94854 0.81090 0.78150 0.87520 1.21001 1.05879 0.96710 1.00406 1.22213 0.91480 0.98537 0.87942 1.67130 1.27105 1.09139 1.22205 1.18355 0.89148 0.88485 0.86583 1.44148 1.55895 1.11053 1.22582 1.21854 0.96393 0.81743 0.97787 0.88131 1.23682 0.96481 1.03616 0.94938 1.21607 0.98053 0.97658 0.91851 0.87968 1.19503 0.96114 0.94866 0.92987 1.21079 1.00867 0.93304 0.99907 1.20976 0.97075 0.99575 0.91564 1.21570 1.03668 0.95995 1.00044 1.18684 0.97687 0.95318 0.81756 1.86427 1.78156 1.39874 1.18657 1.19340 0.74705 0.76017 0.78554 1.93312 1.32927 1.92955 1.95444 1.93331 1.86610 1.89180 1.41990 1.93312 1.80062 1.50761 1.90505 1.20312 1.03777 0.99366 0.90455 1.23454 0.98543 1.01654 0.93692 1.21503 1.05490 1.01777 0.97467 1.21197 0.93825 0.93197 0.94925 0.77420 0.87063 1.17806 1.18100 0.82842 0.75685 0.90253 0.88409 0.84994 0.84746 0.84885 0.84413 0.88047 0.90120 0.84748 0.84613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.03 12.78 -35.23 -0.45 -0.42 16 2 C -0.05 0.02 2.84 36.00 0.10 0.13 16 3 Si 0.68 -0.78 29.82 -169.99 -5.07 -5.85 16 4 C -0.23 -0.05 5.40 -104.47 -0.56 -0.61 16 5 C 0.16 0.12 9.84 -17.57 -0.17 -0.05 16 6 N -0.54 -1.18 10.39 -12.44 -0.13 -1.31 16 7 C 0.41 0.37 7.65 -155.02 -1.19 -0.82 16 8 N -0.71 0.89 5.44 -53.14 -0.29 0.60 16 9 C 0.13 -0.41 4.11 -67.12 -0.28 -0.69 16 10 H 0.10 -0.37 6.10 -51.93 -0.32 -0.69 16 11 C -0.15 0.50 7.25 -25.92 -0.19 0.31 16 12 C -0.07 0.23 3.85 -90.96 -0.35 -0.12 16 13 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 14 C -0.03 0.05 5.29 -104.64 -0.55 -0.50 16 15 C -0.13 0.26 8.61 -39.56 -0.34 -0.08 16 16 C -0.07 0.09 10.04 -39.61 -0.40 -0.31 16 17 C -0.19 -0.07 8.26 -39.43 -0.33 -0.40 16 18 C 0.11 0.12 6.48 -39.22 -0.25 -0.13 16 19 O -0.31 -0.55 10.37 -19.42 -0.20 -0.75 16 20 C 0.60 0.66 3.42 101.05 0.35 1.01 16 21 F -0.16 -0.18 15.56 2.25 0.04 -0.15 16 22 F -0.13 -0.18 17.53 2.25 0.04 -0.14 16 23 F -0.16 -0.18 15.56 2.25 0.04 -0.14 16 24 C -0.12 0.02 9.65 -39.43 -0.38 -0.37 16 25 C -0.14 0.49 7.29 -25.91 -0.19 0.30 16 26 C -0.24 0.02 9.29 -39.22 -0.36 -0.35 16 27 C -0.01 0.00 9.77 -39.32 -0.38 -0.38 16 28 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 29 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 30 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 31 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 32 H 0.15 -0.17 4.88 -52.49 -0.26 -0.43 16 33 H 0.41 -0.64 8.82 -40.82 -0.36 -1.00 16 34 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.10 -0.41 6.32 -51.93 -0.33 -0.74 16 36 H 0.13 -0.53 6.66 -52.49 -0.35 -0.88 16 37 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 38 H 0.13 0.00 5.10 -52.49 -0.27 -0.27 16 39 H 0.14 -0.17 8.05 -52.48 -0.42 -0.59 16 40 H 0.10 -0.42 7.72 -51.93 -0.40 -0.82 16 41 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 42 H 0.13 -0.27 6.03 -52.49 -0.32 -0.59 16 43 H 0.14 -0.12 8.06 -52.48 -0.42 -0.55 16 LS Contribution 367.55 15.07 5.54 5.54 Total: 0.00 -6.25 367.55 -10.31 -16.56 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -4.34 Total: -10.89 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: -5.48 Total: -3.06 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.42 Total: -0.70 kcal Atomic # 8 Polarization: -0.51 SS G_CDS: -0.65 Total: -1.17 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.11 Total: -0.43 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.07 Total: -5.85 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -6.25 -10.31 -16.56 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10860232_13915762.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.585 kcal (2) G-P(sol) polarization free energy of solvation -6.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.313 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.560 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.145 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds