Wall clock time and date at job start Mon Mar 8 2021 03:35:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86296 * 109.47027 * 2 1 4 4 C 1.50693 * 109.47209 * 239.99842 * 2 1 3 5 5 C 1.33335 * 125.95195 * 300.02213 * 4 2 1 6 6 N 1.32119 * 114.57779 * 179.75610 * 5 4 2 7 7 C 1.29684 * 116.86898 * 0.47043 * 6 5 4 8 8 N 1.38610 * 124.95060 * 179.81537 * 7 6 5 9 9 C 1.46494 * 120.00312 * 359.69599 * 8 7 6 10 10 H 1.09004 * 112.90641 * 336.25719 * 9 8 7 11 11 C 1.53959 * 113.53458 * 107.50345 * 9 8 7 12 12 C 1.53778 * 87.01729 * 89.19540 * 11 9 8 13 13 H 1.09002 * 113.60980 * 270.76919 * 12 11 9 14 14 C 1.50699 * 113.61775 * 139.95288 * 12 11 9 15 15 C 1.38245 * 119.96768 * 320.86085 * 14 12 11 16 16 C 1.38290 * 120.10982 * 179.97438 * 15 14 12 17 17 C 1.38126 * 120.05768 * 0.02562 * 16 15 14 18 18 C 1.38749 * 119.94135 * 0.02562 * 17 16 15 19 19 O 1.35901 * 120.05761 * 179.97438 * 18 17 16 20 20 C 1.42904 * 116.99755 * 0.02801 * 19 18 17 21 21 F 1.39905 * 109.47025 * 59.99334 * 20 19 18 22 22 F 1.39892 * 109.46988 * 179.97438 * 20 19 18 23 23 F 1.39903 * 109.46525 * 299.99481 * 20 19 18 24 24 C 1.38165 * 119.97587 * 140.88011 * 14 12 11 25 25 C 1.53780 * 113.62091 * 205.00243 * 9 8 7 26 26 S 1.70963 * 110.10092 * 359.55509 * 7 6 5 27 27 H 0.96705 * 114.00189 * 60.00445 * 1 2 3 28 28 H 1.08999 * 109.46940 * 119.99864 * 2 1 3 29 29 H 1.48496 * 110.00300 * 59.99957 * 3 2 1 30 30 H 1.48503 * 109.99988 * 181.31822 * 3 2 1 31 31 H 1.07997 * 122.70667 * 0.02562 * 5 4 2 32 32 H 0.97003 * 119.99839 * 179.69902 * 8 7 6 33 33 H 1.08994 * 113.66520 * 334.66605 * 11 9 8 34 34 H 1.09003 * 113.61402 * 203.71221 * 11 9 8 35 35 H 1.07995 * 119.94685 * 359.72573 * 15 14 12 36 36 H 1.08005 * 119.97140 * 179.97438 * 16 15 14 37 37 H 1.07998 * 120.03163 * 179.97438 * 17 16 15 38 38 H 1.08001 * 120.02533 * 359.97438 * 24 14 12 39 39 H 1.08993 * 113.61394 * 156.33640 * 25 9 8 40 40 H 1.08994 * 113.68427 * 25.44187 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.6831 -1.9788 -1.5581 6 7 2.2336 -2.3708 -2.6934 7 6 2.9428 -1.4944 -3.3342 8 7 3.5960 -1.7258 -4.5347 9 6 3.5179 -3.0440 -5.1689 10 1 3.2971 -3.8430 -4.4610 11 6 2.6301 -3.0697 -6.4264 12 6 3.8910 -2.7020 -7.2262 13 1 4.0522 -1.6279 -7.3178 14 6 4.0022 -3.4248 -8.5439 15 6 3.6302 -4.7530 -8.6365 16 6 3.7305 -5.4190 -9.8444 17 6 4.2035 -4.7584 -10.9614 18 6 4.5786 -3.4256 -10.8708 19 8 5.0447 -2.7735 -11.9682 20 6 5.1217 -3.5216 -13.1833 21 9 3.8461 -3.9788 -13.5311 22 9 5.6178 -2.7035 -14.2039 23 9 5.9763 -4.6148 -13.0044 24 6 4.4763 -2.7596 -9.6583 25 6 4.7054 -3.3531 -6.0959 26 16 2.9489 -0.0099 -2.4863 27 1 -0.3934 0.4417 -0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5614 2.4679 1.2084 30 1 3.5345 1.7703 -0.0321 31 1 1.0773 -2.6315 -0.9472 32 1 4.1047 -1.0148 -4.9549 33 1 1.8645 -2.2940 -6.4373 34 1 2.2360 -4.0581 -6.6626 35 1 3.2643 -5.2725 -7.7633 36 1 3.4396 -6.4568 -9.9141 37 1 4.2821 -5.2790 -11.9043 38 1 4.7668 -1.7220 -9.5854 39 1 4.8797 -4.4191 -6.2414 40 1 5.6134 -2.8065 -5.8413 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10860232_15704118.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:35:25 Heat of formation + Delta-G solvation = -113.999874 kcal Electronic energy + Delta-G solvation = -30011.259437 eV Core-core repulsion = 25084.809588 eV Total energy + Delta-G solvation = -4926.449849 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.075 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -51.46637 -49.17953 -49.06571 -41.77996 -40.94033 -40.25108 -38.50370 -37.79837 -35.28226 -32.40695 -31.51380 -30.92684 -27.30689 -26.99493 -26.74334 -26.13112 -24.53679 -23.96574 -23.12975 -21.63473 -20.66020 -20.18666 -20.10053 -19.78469 -19.51708 -18.18053 -17.95065 -17.21642 -17.03170 -16.81585 -16.48762 -16.30250 -16.23539 -15.86291 -15.82326 -15.77906 -15.55553 -15.47286 -15.42965 -15.24995 -15.17577 -15.08733 -14.87086 -14.54800 -14.26485 -14.06528 -13.98944 -13.70059 -13.11424 -12.97953 -12.87324 -12.77177 -12.35610 -12.06751 -12.01421 -11.93901 -11.47119 -11.14275 -10.78324 -10.26668 -10.16751 -10.01693 -9.64623 -8.78287 -5.14513 -0.05549 -0.00281 0.03401 0.14569 0.41878 0.67149 1.24957 1.57297 1.78884 1.89814 2.01733 2.04235 2.41521 2.72987 2.95097 3.24885 3.40693 3.44213 3.51427 3.53200 3.64397 3.72894 3.80977 3.90721 3.92802 4.05868 4.13794 4.31707 4.46362 4.48263 4.56399 4.62824 4.73004 4.73849 4.81926 4.87380 4.92037 4.93408 5.15451 5.21080 5.26513 5.43173 5.79965 5.82057 5.99988 6.51474 6.98371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.010 4.010 3 Si 0.655 3.345 4 C -0.306 4.306 5 C 0.119 3.881 6 N -0.548 5.548 7 C 0.327 3.673 8 N -0.676 5.676 9 C 0.137 3.863 10 H 0.109 0.891 11 C -0.143 4.143 12 C -0.075 4.075 13 H 0.101 0.899 14 C -0.034 4.034 15 C -0.133 4.133 16 C -0.074 4.074 17 C -0.194 4.194 18 C 0.107 3.893 19 O -0.311 6.311 20 C 0.604 3.396 21 F -0.164 7.164 22 F -0.130 7.130 23 F -0.164 7.164 24 C -0.121 4.121 25 C -0.136 4.136 26 S 0.089 5.911 27 H 0.380 0.620 28 H 0.122 0.878 29 H -0.236 1.236 30 H -0.241 1.241 31 H 0.176 0.824 32 H 0.415 0.585 33 H 0.077 0.923 34 H 0.098 0.902 35 H 0.133 0.867 36 H 0.135 0.865 37 H 0.133 0.867 38 H 0.138 0.862 39 H 0.102 0.898 40 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.144 0.985 -0.701 1.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.125 4.125 3 Si 0.555 3.445 4 C -0.429 4.429 5 C -0.032 4.032 6 N -0.273 5.273 7 C -0.043 4.043 8 N -0.315 5.315 9 C 0.029 3.971 10 H 0.127 0.873 11 C -0.182 4.182 12 C -0.094 4.094 13 H 0.119 0.881 14 C -0.035 4.035 15 C -0.151 4.151 16 C -0.092 4.092 17 C -0.213 4.213 18 C 0.065 3.935 19 O -0.231 6.231 20 C 0.514 3.486 21 F -0.146 7.146 22 F -0.111 7.111 23 F -0.146 7.146 24 C -0.140 4.140 25 C -0.175 4.175 26 S 0.338 5.662 27 H 0.227 0.773 28 H 0.139 0.861 29 H -0.159 1.159 30 H -0.165 1.165 31 H 0.193 0.807 32 H 0.252 0.748 33 H 0.096 0.904 34 H 0.116 0.884 35 H 0.151 0.849 36 H 0.153 0.847 37 H 0.151 0.849 38 H 0.155 0.845 39 H 0.120 0.880 40 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 1.167 1.735 -0.224 2.103 hybrid contribution -0.143 -1.092 -0.152 1.112 sum 1.023 0.643 -0.375 1.265 Atomic orbital electron populations 1.86514 1.16890 1.81684 1.49137 1.24110 0.84831 1.08876 0.94639 0.94988 0.81996 0.78077 0.89425 1.25594 1.13233 0.99290 1.04790 1.21333 0.97119 0.93045 0.91677 1.66475 1.16811 1.33642 1.10389 1.23695 0.94956 0.93566 0.92085 1.43694 1.54441 1.14032 1.19287 1.21916 0.96329 0.84970 0.93917 0.87305 1.23649 0.96401 1.03350 0.94809 1.21656 0.97994 0.99590 0.90135 0.88117 1.19499 0.96341 0.93789 0.93835 1.21095 1.01523 0.94213 0.98244 1.20984 0.96429 1.00149 0.91604 1.21567 1.04996 0.93284 1.01422 1.18681 0.98128 0.91648 0.85045 1.86425 1.81140 1.39506 1.16061 1.19339 0.74848 0.74963 0.79469 1.93314 1.40203 1.88797 1.92321 1.93327 1.87492 1.73276 1.57032 1.93313 1.71260 1.55117 1.94950 1.20298 1.03683 1.00967 0.89003 1.23478 0.97379 1.02582 0.94020 1.84002 1.51557 1.13595 1.17033 0.77252 0.86123 1.15888 1.16504 0.80672 0.74789 0.90430 0.88409 0.84943 0.84733 0.84894 0.84452 0.87981 0.90248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.02 12.87 -35.23 -0.45 -0.44 16 2 C -0.01 0.00 2.99 36.00 0.11 0.11 16 3 Si 0.66 -0.59 31.05 -169.99 -5.28 -5.87 16 4 C -0.31 -0.10 5.74 -36.02 -0.21 -0.31 16 5 C 0.12 0.17 11.22 -19.14 -0.21 -0.04 16 6 N -0.55 -1.23 9.84 -15.21 -0.15 -1.38 16 7 C 0.33 0.15 8.09 -87.68 -0.71 -0.55 16 8 N -0.68 1.24 5.42 -54.90 -0.30 0.95 16 9 C 0.14 -0.30 4.45 -67.03 -0.30 -0.60 16 10 H 0.11 -0.07 7.67 -51.93 -0.40 -0.47 16 11 C -0.14 0.37 7.27 -25.83 -0.19 0.18 16 12 C -0.08 0.24 3.85 -90.96 -0.35 -0.11 16 13 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 14 C -0.03 0.05 5.29 -104.65 -0.55 -0.50 16 15 C -0.13 0.22 8.53 -39.56 -0.34 -0.12 16 16 C -0.07 0.07 10.04 -39.60 -0.40 -0.33 16 17 C -0.19 -0.09 8.26 -39.43 -0.33 -0.41 16 18 C 0.11 0.12 6.48 -39.22 -0.25 -0.14 16 19 O -0.31 -0.52 10.37 -19.43 -0.20 -0.72 16 20 C 0.60 0.64 3.42 101.05 0.35 0.98 16 21 F -0.16 -0.18 15.56 2.25 0.04 -0.15 16 22 F -0.13 -0.17 17.53 2.25 0.04 -0.13 16 23 F -0.16 -0.18 15.56 2.25 0.04 -0.14 16 24 C -0.12 0.03 9.65 -39.43 -0.38 -0.35 16 25 C -0.14 0.46 7.29 -25.92 -0.19 0.27 16 26 S 0.09 -0.05 20.57 -107.50 -2.21 -2.26 16 27 H 0.38 -1.37 8.70 45.56 0.40 -0.98 16 28 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 29 H -0.24 -0.42 7.11 56.52 0.40 -0.02 16 30 H -0.24 -0.31 7.11 56.52 0.40 0.09 16 31 H 0.18 0.07 8.06 -52.49 -0.42 -0.35 16 32 H 0.41 -1.60 8.83 -40.82 -0.36 -1.96 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 34 H 0.10 -0.29 6.40 -51.93 -0.33 -0.62 16 35 H 0.13 -0.45 6.72 -52.49 -0.35 -0.80 16 36 H 0.13 -0.38 8.06 -52.48 -0.42 -0.81 16 37 H 0.13 0.01 5.10 -52.49 -0.27 -0.26 16 38 H 0.14 -0.22 8.05 -52.49 -0.42 -0.64 16 39 H 0.10 -0.36 7.63 -51.93 -0.40 -0.76 16 40 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 LS Contribution 363.09 15.07 5.47 5.47 Total: 0.00 -5.84 363.09 -10.82 -16.66 By element: Atomic # 1 Polarization: -6.22 SS G_CDS: -3.86 Total: -10.08 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: -3.95 Total: -1.92 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.45 Total: -0.43 kcal Atomic # 8 Polarization: -0.50 SS G_CDS: -0.65 Total: -1.16 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.11 Total: -0.42 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.28 Total: -5.87 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -2.21 Total: -2.26 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -5.84 -10.82 -16.66 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10860232_15704118.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.342 kcal (2) G-P(sol) polarization free energy of solvation -5.841 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.183 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.657 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds