Wall clock time and date at job start Mon Mar 8 2021 03:35:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33335 * 125.95422 * 2 1 4 4 C 1.50705 * 122.70530 * 359.97438 * 3 2 1 5 5 O 1.42905 * 109.46883 * 113.58801 * 4 3 2 6 6 Si 1.86297 * 109.46727 * 233.58502 * 4 3 2 7 7 N 1.32114 * 114.58013 * 180.02562 * 3 2 1 8 8 C 1.29689 * 116.86641 * 359.97438 * 7 3 2 9 9 N 1.38611 * 124.94487 * 179.97438 * 8 7 3 10 10 C 1.46502 * 119.99798 * 180.02562 * 9 8 7 11 11 H 1.09002 * 112.84732 * 23.80470 * 10 9 8 12 12 C 1.53776 * 113.61742 * 154.99869 * 10 9 8 13 13 C 1.53788 * 87.08285 * 89.11410 * 12 10 9 14 14 H 1.08993 * 113.61597 * 270.89017 * 13 12 10 15 15 C 1.50700 * 113.61305 * 140.06238 * 13 12 10 16 16 C 1.38122 * 119.96470 * 121.53613 * 15 13 12 17 17 C 1.38754 * 119.93959 * 180.02562 * 16 15 13 18 18 O 1.35899 * 120.05558 * 180.02562 * 17 16 15 19 19 C 1.42899 * 117.00121 * 179.97438 * 18 17 16 20 20 F 1.39907 * 109.47102 * 59.99935 * 19 18 17 21 21 F 1.39901 * 109.47503 * 179.97438 * 19 18 17 22 22 F 1.39895 * 109.47253 * 300.00093 * 19 18 17 23 23 C 1.38716 * 119.89172 * 359.97438 * 17 16 15 24 24 C 1.38163 * 119.93893 * 359.97438 * 23 17 16 25 25 C 1.38243 * 120.05828 * 359.73484 * 24 23 17 26 26 C 1.53782 * 87.16803 * 25.47695 * 13 12 10 27 27 S 1.70959 * 110.10164 * 0.25047 * 8 7 3 28 28 H 1.08996 * 109.47058 * 84.92449 * 1 2 3 29 29 H 1.08997 * 109.46929 * 204.92549 * 1 2 3 30 30 H 1.09002 * 109.46902 * 324.92530 * 1 2 3 31 31 H 1.08997 * 109.47497 * 353.58706 * 4 3 2 32 32 H 0.96701 * 113.99761 * 180.02562 * 5 4 3 33 33 H 1.48504 * 109.99586 * 178.68108 * 6 4 3 34 34 H 1.48498 * 110.00087 * 299.99987 * 6 4 3 35 35 H 0.97003 * 120.00193 * 0.02562 * 9 8 7 36 36 H 1.09006 * 113.61466 * 334.57333 * 12 10 9 37 37 H 1.09000 * 113.62151 * 203.66626 * 12 10 9 38 38 H 1.07997 * 120.03615 * 0.02562 * 16 15 13 39 39 H 1.07998 * 120.02686 * 179.97438 * 23 17 16 40 40 H 1.08005 * 119.96898 * 179.97438 * 24 23 17 41 41 H 1.08008 * 119.94689 * 180.29325 * 25 24 23 42 42 H 1.08999 * 113.61739 * 89.07411 * 26 13 12 43 43 H 1.09003 * 113.61705 * 219.97798 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2899 1.0793 0.0000 4 6 1.7414 2.4830 -0.0006 5 8 2.0698 3.1232 1.2342 6 14 2.4872 3.4404 -1.4140 7 7 3.5851 0.8188 -0.0005 8 6 3.9315 -0.4310 -0.0005 9 7 5.2385 -0.8926 -0.0015 10 6 5.5066 -2.3329 -0.0019 11 1 4.6802 -2.9171 -0.4068 12 6 6.8743 -2.7048 -0.5984 13 6 7.4482 -2.5443 0.8193 14 1 7.7795 -1.5305 1.0440 15 6 8.4746 -3.5882 1.1768 16 6 9.7514 -3.2050 1.5383 17 6 10.6962 -4.1667 1.8668 18 8 11.9530 -3.7923 2.2233 19 6 12.8730 -4.8360 2.5491 20 9 13.0313 -5.6798 1.4443 21 9 14.1098 -4.2780 2.8900 22 9 12.3790 -5.5723 3.6311 23 6 10.3554 -5.5109 1.8317 24 6 9.0765 -5.8888 1.4705 25 6 8.1353 -4.9285 1.1494 26 6 6.0380 -2.8620 1.3438 27 16 2.5413 -1.4260 -0.0067 28 1 -0.3633 0.0909 -1.0236 29 1 -0.3633 -0.9319 0.4331 30 1 -0.3633 0.8411 0.5906 31 1 0.6581 2.4499 -0.1157 32 1 1.7471 4.0321 1.3039 33 1 1.9305 4.8168 -1.4448 34 1 3.9641 3.4930 -1.2686 35 1 5.9756 -0.2620 -0.0019 36 1 7.2548 -1.9710 -1.3091 37 1 6.9229 -3.7261 -0.9761 38 1 10.0143 -2.1579 1.5652 39 1 11.0891 -6.2613 2.0866 40 1 8.8108 -6.9353 1.4426 41 1 7.1348 -5.2258 0.8718 42 1 5.8582 -3.9262 1.4962 43 1 5.7436 -2.2551 2.2001 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10860232_15704122.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:35:30 Heat of formation + Delta-G solvation = -116.996142 kcal Electronic energy + Delta-G solvation = -32181.758084 eV Core-core repulsion = 27099.640689 eV Total energy + Delta-G solvation = -5082.117396 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.090 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -51.46628 -49.17667 -49.06641 -41.79713 -40.98833 -40.50912 -38.55112 -37.58198 -35.52812 -33.06599 -32.16063 -31.23889 -29.02923 -27.26041 -26.96240 -26.32915 -25.56959 -24.31673 -23.94012 -23.18351 -21.36826 -20.20908 -20.18683 -20.05692 -19.94371 -18.92167 -18.38246 -18.09797 -17.43982 -17.21307 -16.78135 -16.38002 -16.30487 -16.09304 -16.04877 -15.82475 -15.58024 -15.55564 -15.46962 -15.31256 -15.22844 -15.19176 -15.15711 -14.57514 -14.47317 -14.17255 -14.06545 -13.93686 -13.84565 -13.70533 -13.44059 -13.13082 -12.99775 -12.93616 -12.82570 -12.23447 -11.99432 -11.98177 -11.74907 -11.52895 -11.04408 -10.50209 -10.38269 -10.03111 -9.92846 -9.65914 -8.60945 -4.86033 0.00796 0.04163 0.13583 0.22164 0.41823 0.79712 1.34486 1.72478 1.78701 1.83152 1.92461 2.26791 2.39981 2.72924 2.95025 3.16274 3.34845 3.39681 3.46024 3.52508 3.64561 3.67754 3.75881 3.87331 4.03043 4.05200 4.09413 4.19656 4.24566 4.29094 4.40376 4.47887 4.55492 4.65916 4.69316 4.77957 4.81138 4.87267 4.91504 4.94067 4.97047 5.15652 5.23983 5.25257 5.40687 5.65328 5.79081 6.29350 6.49242 7.04375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C -0.246 4.246 3 C 0.118 3.882 4 C -0.039 4.039 5 O -0.529 6.529 6 Si 0.695 3.305 7 N -0.535 5.535 8 C 0.318 3.682 9 N -0.678 5.678 10 C 0.126 3.874 11 H 0.099 0.901 12 C -0.131 4.131 13 C -0.074 4.074 14 H 0.103 0.897 15 C -0.035 4.035 16 C -0.120 4.120 17 C 0.108 3.892 18 O -0.311 6.311 19 C 0.604 3.396 20 F -0.164 7.164 21 F -0.130 7.130 22 F -0.164 7.164 23 C -0.194 4.194 24 C -0.074 4.074 25 C -0.133 4.133 26 C -0.148 4.148 27 S 0.108 5.892 28 H 0.076 0.924 29 H 0.069 0.931 30 H 0.077 0.923 31 H 0.081 0.919 32 H 0.379 0.621 33 H -0.261 1.261 34 H -0.247 1.247 35 H 0.413 0.587 36 H 0.083 0.917 37 H 0.105 0.895 38 H 0.138 0.862 39 H 0.134 0.866 40 H 0.135 0.865 41 H 0.133 0.867 42 H 0.101 0.899 43 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.215 -3.077 -3.144 6.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.369 4.369 3 C -0.012 4.012 4 C -0.151 4.151 5 O -0.336 6.336 6 Si 0.594 3.406 7 N -0.259 5.259 8 C -0.053 4.053 9 N -0.318 5.318 10 C 0.020 3.980 11 H 0.117 0.883 12 C -0.169 4.169 13 C -0.092 4.092 14 H 0.121 0.879 15 C -0.035 4.035 16 C -0.139 4.139 17 C 0.066 3.934 18 O -0.231 6.231 19 C 0.514 3.486 20 F -0.146 7.146 21 F -0.111 7.111 22 F -0.146 7.146 23 C -0.212 4.212 24 C -0.092 4.092 25 C -0.151 4.151 26 C -0.187 4.187 27 S 0.357 5.643 28 H 0.095 0.905 29 H 0.088 0.912 30 H 0.096 0.904 31 H 0.099 0.901 32 H 0.227 0.773 33 H -0.186 1.186 34 H -0.170 1.170 35 H 0.251 0.749 36 H 0.102 0.898 37 H 0.123 0.877 38 H 0.156 0.844 39 H 0.151 0.849 40 H 0.153 0.847 41 H 0.150 0.850 42 H 0.119 0.881 43 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -3.067 -3.671 -3.254 5.785 hybrid contribution 0.318 1.425 1.269 1.935 sum -2.749 -2.246 -1.984 4.066 Atomic orbital electron populations 1.20185 0.86752 1.03185 1.02870 1.25079 1.01117 0.93235 1.17504 1.18778 0.86520 0.94495 1.01448 1.24276 1.01925 0.92945 0.95921 1.86637 1.81227 1.31018 1.34671 0.94797 0.81986 0.79505 0.84328 1.66061 1.17525 1.16390 1.25954 1.23263 0.91688 0.91490 0.98890 1.43561 1.01911 1.06068 1.80282 1.22003 0.98494 0.79989 0.97563 0.88288 1.23437 0.93711 1.03715 0.96084 1.21617 0.92801 0.97945 0.96848 0.87891 1.19475 0.92876 0.94309 0.96826 1.20310 0.91356 0.99046 1.03144 1.18686 0.81534 0.94015 0.99209 1.86428 1.21188 1.32771 1.82725 1.19339 0.78170 0.75974 0.75132 1.93313 1.95489 1.71743 1.54096 1.93331 1.40027 1.85791 1.91963 1.93311 1.87518 1.77511 1.56287 1.21573 0.99697 0.93839 1.06128 1.20975 0.91781 1.00239 0.96166 1.21077 1.00176 0.92054 1.01818 1.23747 0.94293 1.02698 0.97934 1.83857 0.96406 1.09995 1.74016 0.90495 0.91242 0.90445 0.90149 0.77313 1.18617 1.17044 0.74855 0.89822 0.87697 0.84422 0.84869 0.84706 0.84955 0.88069 0.90060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.08 9.71 36.01 0.35 0.43 16 2 C -0.25 -0.40 6.57 -36.02 -0.24 -0.63 16 3 C 0.12 0.39 5.22 -84.18 -0.44 -0.05 16 4 C -0.04 -0.06 2.83 36.01 0.10 0.04 16 5 O -0.53 -1.55 12.86 -35.23 -0.45 -2.00 16 6 Si 0.69 0.72 32.62 -169.99 -5.54 -4.82 16 7 N -0.53 -2.42 9.77 -11.36 -0.11 -2.53 16 8 C 0.32 0.70 8.24 -87.68 -0.72 -0.03 16 9 N -0.68 0.25 5.42 -54.85 -0.30 -0.04 16 10 C 0.13 -0.34 4.32 -66.98 -0.29 -0.63 16 11 H 0.10 -0.30 7.05 -51.93 -0.37 -0.67 16 12 C -0.13 0.47 7.29 -25.92 -0.19 0.28 16 13 C -0.07 0.21 3.85 -90.95 -0.35 -0.14 16 14 H 0.10 -0.29 8.08 -51.93 -0.42 -0.71 16 15 C -0.03 0.05 5.29 -104.65 -0.55 -0.51 16 16 C -0.12 -0.01 9.65 -39.43 -0.38 -0.39 16 17 C 0.11 0.14 6.48 -39.21 -0.25 -0.11 16 18 O -0.31 -0.61 10.37 -19.42 -0.20 -0.81 16 19 C 0.60 0.76 3.42 101.05 0.35 1.11 16 20 F -0.16 -0.20 15.56 2.25 0.04 -0.16 16 21 F -0.13 -0.20 17.53 2.25 0.04 -0.16 16 22 F -0.16 -0.21 15.56 2.25 0.04 -0.17 16 23 C -0.19 -0.09 8.26 -39.43 -0.33 -0.41 16 24 C -0.07 0.08 10.04 -39.61 -0.40 -0.32 16 25 C -0.13 0.25 8.55 -39.56 -0.34 -0.09 16 26 C -0.15 0.42 7.27 -25.78 -0.19 0.23 16 27 S 0.11 0.07 21.68 -107.50 -2.33 -2.26 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.08 -0.12 7.17 -51.93 -0.37 -0.49 16 31 H 0.08 -0.09 6.33 -51.93 -0.33 -0.42 16 32 H 0.38 -0.60 8.74 45.56 0.40 -0.20 16 33 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 34 H -0.25 -1.32 7.11 56.52 0.40 -0.92 16 35 H 0.41 -0.29 8.83 -40.82 -0.36 -0.65 16 36 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 37 H 0.10 -0.45 7.66 -51.93 -0.40 -0.85 16 38 H 0.14 -0.13 8.05 -52.49 -0.42 -0.55 16 39 H 0.13 0.01 5.10 -52.49 -0.27 -0.26 16 40 H 0.14 -0.42 8.06 -52.48 -0.42 -0.84 16 41 H 0.13 -0.54 6.71 -52.48 -0.35 -0.89 16 42 H 0.10 -0.40 6.37 -51.93 -0.33 -0.73 16 43 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 LS Contribution 383.32 15.07 5.78 5.78 Total: 0.00 -7.68 383.32 -11.45 -19.13 By element: Atomic # 1 Polarization: -6.20 SS G_CDS: -4.53 Total: -10.74 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -3.87 Total: -1.21 kcal Atomic # 7 Polarization: -2.16 SS G_CDS: -0.41 Total: -2.57 kcal Atomic # 8 Polarization: -2.16 SS G_CDS: -0.65 Total: -2.81 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 0.11 Total: -0.50 kcal Atomic # 14 Polarization: 0.72 SS G_CDS: -5.54 Total: -4.82 kcal Atomic # 16 Polarization: 0.07 SS G_CDS: -2.33 Total: -2.26 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -7.68 -11.45 -19.13 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10860232_15704122.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.865 kcal (2) G-P(sol) polarization free energy of solvation -7.681 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.546 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.131 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.996 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds