Wall clock time and date at job start Mon Mar 8 2021 03:35:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.47003 * 2 1 4 4 C 1.50703 * 109.46968 * 240.00491 * 2 1 3 5 5 C 1.37980 * 120.32846 * 119.99784 * 4 2 1 6 6 N 1.32014 * 120.90030 * 179.97438 * 5 4 2 7 7 C 1.32336 * 121.64682 * 0.02562 * 6 5 4 8 8 N 1.39148 * 119.71736 * 179.97438 * 7 6 5 9 9 C 1.46497 * 120.00074 * 0.02562 * 8 7 6 10 10 H 1.09001 * 112.84822 * 25.32791 * 9 8 7 11 11 C 1.53780 * 113.61535 * 156.52955 * 9 8 7 12 12 C 1.53784 * 87.07961 * 89.11521 * 11 9 8 13 13 H 1.09002 * 113.61272 * 270.79779 * 12 11 9 14 14 C 1.50698 * 113.61469 * 139.98335 * 12 11 9 15 15 C 1.38249 * 119.96898 * 299.72423 * 14 12 11 16 16 C 1.38292 * 120.11044 * 179.72860 * 15 14 12 17 17 C 1.38129 * 120.05250 * 0.54027 * 16 15 14 18 18 C 1.38750 * 119.94655 * 359.73572 * 17 16 15 19 19 O 1.35897 * 120.05817 * 180.02562 * 18 17 16 20 20 C 1.42904 * 116.99949 * 359.97231 * 19 18 17 21 21 F 1.39897 * 109.46988 * 60.00176 * 20 19 18 22 22 F 1.39892 * 109.46997 * 180.02562 * 20 19 18 23 23 F 1.39903 * 109.47149 * 300.00247 * 20 19 18 24 24 C 1.38168 * 119.97637 * 119.99627 * 14 12 11 25 25 C 1.53783 * 113.61401 * 254.13710 * 9 8 7 26 26 C 1.39346 * 120.56454 * 359.97438 * 7 6 5 27 27 F 1.35097 * 120.46944 * 179.97438 * 26 7 6 28 28 C 1.38440 * 119.05258 * 0.02562 * 26 7 6 29 29 H 0.96705 * 114.00270 * 60.00057 * 1 2 3 30 30 H 1.08988 * 109.47396 * 120.00254 * 2 1 3 31 31 H 1.48494 * 109.99800 * 60.00240 * 3 2 1 32 32 H 1.48496 * 109.99911 * 181.32294 * 3 2 1 33 33 H 1.08000 * 119.55389 * 0.02562 * 5 4 2 34 34 H 0.96999 * 119.99609 * 179.97438 * 8 7 6 35 35 H 1.09005 * 113.61341 * 203.66002 * 11 9 8 36 36 H 1.08995 * 113.61293 * 334.47859 * 11 9 8 37 37 H 1.07992 * 119.94513 * 359.97438 * 15 14 12 38 38 H 1.07999 * 119.97411 * 180.25472 * 16 15 14 39 39 H 1.07993 * 120.02640 * 179.75109 * 17 16 15 40 40 H 1.07998 * 120.02421 * 359.97438 * 24 14 12 41 41 H 1.09005 * 113.61196 * 25.43173 * 25 9 8 42 42 H 1.09002 * 113.61603 * 156.33116 * 25 9 8 43 43 H 1.08004 * 120.75278 * 179.97438 * 28 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7249 -0.0462 -2.1432 6 7 3.1716 -0.6576 -3.2247 7 6 2.8790 -1.9232 -3.4776 8 7 3.3710 -2.5278 -4.6303 9 6 4.2094 -1.7639 -5.5574 10 1 4.7318 -0.9385 -5.0737 11 6 5.1207 -2.6424 -6.4306 12 6 3.9633 -2.7009 -7.4416 13 1 3.2730 -3.5264 -7.2677 14 6 4.4105 -2.6047 -8.8775 15 6 5.0914 -1.4839 -9.3150 16 6 5.5081 -1.3949 -10.6307 17 6 5.2349 -2.4214 -11.5137 18 6 4.5467 -3.5447 -11.0784 19 8 4.2771 -4.5562 -11.9451 20 6 4.7315 -4.3961 -13.2905 21 9 6.1233 -4.2547 -13.2989 22 9 4.3720 -5.5205 -14.0410 23 9 4.1436 -3.2559 -13.8487 24 6 4.1347 -3.6340 -9.7569 25 6 3.4855 -1.3600 -6.8527 26 6 2.0825 -2.6555 -2.5996 27 9 1.7846 -3.9472 -2.8599 28 6 1.5999 -2.0401 -1.4572 29 1 -0.3934 0.4417 -0.7651 30 1 1.7923 -0.5138 0.8898 31 1 1.5615 2.4678 1.2085 32 1 3.5345 1.7703 -0.0322 33 1 2.9850 0.9876 -1.9702 34 1 3.1593 -3.4553 -4.8195 35 1 6.0015 -2.1209 -6.8051 36 1 5.3588 -3.6064 -5.9811 37 1 5.3018 -0.6783 -8.6273 38 1 6.0435 -0.5202 -10.9691 39 1 5.5570 -2.3497 -12.5420 40 1 3.5993 -4.5076 -9.4155 41 1 2.4031 -1.2901 -6.7443 42 1 3.9201 -0.4885 -7.3423 43 1 0.9799 -2.5817 -0.7581 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10860232_17656566.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:35:34 Heat of formation + Delta-G solvation = -165.644243 kcal Electronic energy + Delta-G solvation = -34204.544503 eV Core-core repulsion = 28717.248965 eV Total energy + Delta-G solvation = -5487.295539 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.109 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -51.45608 -49.89807 -49.16819 -49.05516 -41.82595 -41.36371 -40.45882 -38.54545 -37.88363 -35.48326 -33.23724 -32.47458 -31.60057 -30.77950 -27.28385 -26.94457 -26.72201 -26.06894 -24.79914 -23.95499 -23.07900 -22.88124 -21.01797 -20.17573 -20.06964 -19.86122 -19.46024 -18.53817 -18.24037 -17.92858 -17.54929 -17.18227 -16.98661 -16.72933 -16.28787 -16.25119 -16.13999 -16.06881 -15.81604 -15.76230 -15.54435 -15.45942 -15.39463 -15.24534 -15.19472 -15.13369 -14.77093 -14.55528 -14.37175 -14.22466 -14.03597 -13.95679 -13.66755 -13.50987 -13.09328 -12.85520 -12.80821 -12.63012 -12.11056 -12.01121 -11.93607 -11.43149 -11.23796 -10.70895 -10.68353 -10.49023 -9.99706 -9.62984 -8.81449 -5.11648 -0.10308 0.04656 0.08943 0.16272 0.43280 1.19783 1.54860 1.80048 1.85997 1.90800 2.43162 2.51833 2.74207 2.96350 3.00739 3.17204 3.33325 3.37655 3.48943 3.54727 3.55418 3.56891 3.75091 3.80394 3.83469 3.92566 3.95017 4.07689 4.15900 4.33338 4.38161 4.42775 4.52900 4.59150 4.65741 4.69791 4.77602 4.85321 4.91399 4.94162 4.95103 5.01506 5.19397 5.28256 5.37953 5.46032 5.81811 5.92462 6.12065 6.49543 6.90920 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.686 3.314 4 C -0.209 4.209 5 C 0.147 3.853 6 N -0.510 5.510 7 C 0.392 3.608 8 N -0.700 5.700 9 C 0.134 3.866 10 H 0.110 0.890 11 C -0.137 4.137 12 C -0.076 4.076 13 H 0.100 0.900 14 C -0.034 4.034 15 C -0.133 4.133 16 C -0.074 4.074 17 C -0.195 4.195 18 C 0.107 3.893 19 O -0.311 6.311 20 C 0.604 3.396 21 F -0.164 7.164 22 F -0.130 7.130 23 F -0.164 7.164 24 C -0.121 4.121 25 C -0.143 4.143 26 C -0.019 4.019 27 F -0.133 7.133 28 C -0.038 4.038 29 H 0.380 0.620 30 H 0.116 0.884 31 H -0.251 1.251 32 H -0.254 1.254 33 H 0.163 0.837 34 H 0.413 0.587 35 H 0.101 0.899 36 H 0.078 0.922 37 H 0.133 0.867 38 H 0.135 0.865 39 H 0.133 0.867 40 H 0.137 0.863 41 H 0.076 0.924 42 H 0.098 0.902 43 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.495 3.426 0.035 3.461 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.167 4.167 3 Si 0.588 3.412 4 C -0.214 4.214 5 C -0.010 4.010 6 N -0.226 5.226 7 C 0.154 3.846 8 N -0.333 5.333 9 C 0.028 3.972 10 H 0.128 0.872 11 C -0.175 4.175 12 C -0.094 4.094 13 H 0.118 0.882 14 C -0.034 4.034 15 C -0.151 4.151 16 C -0.092 4.092 17 C -0.213 4.213 18 C 0.065 3.935 19 O -0.231 6.231 20 C 0.514 3.486 21 F -0.146 7.146 22 F -0.111 7.111 23 F -0.146 7.146 24 C -0.140 4.140 25 C -0.182 4.182 26 C -0.046 4.046 27 F -0.112 7.112 28 C -0.064 4.064 29 H 0.227 0.773 30 H 0.133 0.867 31 H -0.176 1.176 32 H -0.179 1.179 33 H 0.180 0.820 34 H 0.250 0.750 35 H 0.120 0.880 36 H 0.096 0.904 37 H 0.151 0.849 38 H 0.153 0.847 39 H 0.151 0.849 40 H 0.155 0.845 41 H 0.095 0.905 42 H 0.116 0.884 43 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 1.616 4.051 0.288 4.371 hybrid contribution -0.481 -1.831 0.059 1.894 sum 1.134 2.220 0.347 2.517 Atomic orbital electron populations 1.86513 1.17063 1.81662 1.49328 1.24864 0.85247 1.09923 0.96644 0.94833 0.81042 0.77592 0.87762 1.20946 1.04749 0.95222 1.00492 1.22351 0.91773 0.99061 0.87811 1.67287 1.26167 1.07387 1.21779 1.18385 0.90106 0.89124 0.86957 1.44235 1.54408 1.14319 1.20296 1.21805 0.91465 0.95149 0.88794 0.87200 1.23463 0.97204 1.01240 0.95619 1.21699 0.98420 0.99718 0.89595 0.88176 1.19512 0.96238 0.92955 0.94695 1.21099 0.99621 0.98286 0.96076 1.20982 0.97548 0.97793 0.92866 1.21563 1.03279 0.94747 1.01718 1.18680 0.98793 0.86731 0.89294 1.86426 1.75502 1.43889 1.17319 1.19337 0.74914 0.74637 0.79730 1.93310 1.29892 1.95327 1.96112 1.93327 1.91878 1.51668 1.74263 1.93312 1.84151 1.51304 1.85874 1.20306 1.03507 1.00858 0.89310 1.23659 1.01825 0.96663 0.96048 1.17998 1.06802 0.80930 0.98848 1.91495 1.92172 1.33600 1.93961 1.21283 0.96175 0.94269 0.94660 0.77274 0.86697 1.17601 1.17853 0.82009 0.74993 0.88049 0.90376 0.84905 0.84737 0.84906 0.84480 0.90549 0.88418 0.83260 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.49 12.78 -35.23 -0.45 0.04 16 2 C -0.06 0.08 2.84 36.01 0.10 0.19 16 3 Si 0.69 -1.64 29.82 -169.99 -5.07 -6.70 16 4 C -0.21 0.17 5.40 -104.47 -0.56 -0.39 16 5 C 0.15 -0.11 9.84 -17.57 -0.17 -0.29 16 6 N -0.51 -0.37 9.15 -12.36 -0.11 -0.48 16 7 C 0.39 0.29 7.49 -154.85 -1.16 -0.87 16 8 N -0.70 0.69 5.42 -53.06 -0.29 0.40 16 9 C 0.13 -0.27 4.32 -67.12 -0.29 -0.56 16 10 H 0.11 -0.13 7.45 -51.93 -0.39 -0.52 16 11 C -0.14 0.40 7.29 -25.92 -0.19 0.21 16 12 C -0.08 0.19 3.87 -90.82 -0.35 -0.16 16 13 H 0.10 -0.28 8.09 -51.93 -0.42 -0.70 16 14 C -0.03 0.04 5.29 -104.64 -0.55 -0.52 16 15 C -0.13 0.20 8.62 -39.56 -0.34 -0.14 16 16 C -0.07 0.06 10.04 -39.60 -0.40 -0.33 16 17 C -0.19 -0.12 8.26 -39.43 -0.33 -0.45 16 18 C 0.11 0.15 6.48 -39.22 -0.25 -0.11 16 19 O -0.31 -0.61 10.37 -19.42 -0.20 -0.81 16 20 C 0.60 0.76 3.42 101.05 0.35 1.11 16 21 F -0.16 -0.20 15.56 2.25 0.04 -0.17 16 22 F -0.13 -0.20 17.53 2.25 0.04 -0.16 16 23 F -0.16 -0.21 15.56 2.25 0.04 -0.17 16 24 C -0.12 -0.02 9.65 -39.43 -0.38 -0.40 16 25 C -0.14 0.35 7.27 -25.78 -0.19 0.16 16 26 C -0.02 -0.02 7.35 -39.09 -0.29 -0.31 16 27 F -0.13 -0.23 16.65 2.25 0.04 -0.19 16 28 C -0.04 -0.01 9.75 -39.26 -0.38 -0.39 16 29 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 30 H 0.12 -0.13 7.96 -51.94 -0.41 -0.55 16 31 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 32 H -0.25 0.06 7.11 56.52 0.40 0.46 16 33 H 0.16 -0.49 4.88 -52.49 -0.26 -0.74 16 34 H 0.41 -0.77 8.18 -40.82 -0.33 -1.11 16 35 H 0.10 -0.34 7.73 -51.93 -0.40 -0.74 16 36 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.13 -0.46 6.63 -52.49 -0.35 -0.80 16 38 H 0.13 -0.38 8.06 -52.49 -0.42 -0.81 16 39 H 0.13 0.02 5.10 -52.49 -0.27 -0.24 16 40 H 0.14 -0.13 8.05 -52.49 -0.42 -0.55 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.10 -0.31 6.30 -51.93 -0.33 -0.63 16 43 H 0.15 -0.08 8.06 -52.48 -0.42 -0.50 16 LS Contribution 375.70 15.07 5.66 5.66 Total: 0.00 -5.91 375.70 -9.77 -15.68 By element: Atomic # 1 Polarization: -5.78 SS G_CDS: -4.07 Total: -9.85 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -5.39 Total: -3.24 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.40 Total: -0.09 kcal Atomic # 8 Polarization: -0.12 SS G_CDS: -0.65 Total: -0.77 kcal Atomic # 9 Polarization: -0.84 SS G_CDS: 0.15 Total: -0.69 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.07 Total: -6.70 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -5.91 -9.77 -15.68 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10860232_17656566.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.965 kcal (2) G-P(sol) polarization free energy of solvation -5.909 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.770 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.679 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds