Wall clock time and date at job start Mon Mar 8 2021 03:38:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35900 * 117.00295 * 2 1 4 4 C 1.38714 * 120.05395 * 359.97115 * 3 2 1 5 5 C 1.38164 * 119.94631 * 180.02562 * 4 3 2 6 6 C 1.38244 * 120.05267 * 359.75137 * 5 4 3 7 7 C 1.38287 * 120.11434 * 0.50863 * 6 5 4 8 8 C 1.50692 * 119.97395 * 179.76339 * 7 6 5 9 9 H 1.09006 * 112.85347 * 190.91532 * 8 7 6 10 10 C 1.53781 * 113.69400 * 322.18903 * 8 7 6 11 11 C 1.53778 * 87.08250 * 139.99069 * 10 8 7 12 12 H 1.09004 * 113.69285 * 220.00790 * 11 10 8 13 13 N 1.46504 * 113.61644 * 89.11888 * 11 10 8 14 14 C 1.46507 * 119.99672 * 322.50334 * 13 11 10 15 15 C 1.38608 * 120.00174 * 142.50150 * 13 11 10 16 16 N 1.29677 * 124.94973 * 359.97438 * 15 13 11 17 17 C 1.32124 * 116.86481 * 180.02562 * 16 15 13 18 18 C 1.33320 * 114.58045 * 0.02562 * 17 16 15 19 19 C 1.50700 * 125.95274 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.46747 * 245.02255 * 19 18 17 21 21 Si 1.86304 * 109.46981 * 5.01527 * 19 18 17 22 22 S 1.70974 * 124.94672 * 179.97438 * 15 13 11 23 23 C 1.53779 * 87.08334 * 334.56827 * 11 10 8 24 24 C 1.38128 * 120.05178 * 359.48849 * 7 6 5 25 25 H 1.09003 * 109.46859 * 300.00565 * 1 2 3 26 26 H 1.08994 * 109.47405 * 60.00240 * 1 2 3 27 27 H 1.08992 * 109.47338 * 180.02562 * 1 2 3 28 28 H 1.07999 * 120.02640 * 0.05459 * 4 3 2 29 29 H 1.08000 * 119.97774 * 180.02562 * 5 4 3 30 30 H 1.08002 * 119.94451 * 180.25183 * 6 5 4 31 31 H 1.09000 * 113.61106 * 25.44521 * 10 8 7 32 32 H 1.09003 * 113.61584 * 254.53898 * 10 8 7 33 33 H 1.09005 * 109.46707 * 269.99962 * 14 13 11 34 34 H 1.08995 * 109.46902 * 29.99428 * 14 13 11 35 35 H 1.08996 * 109.46732 * 150.00083 * 14 13 11 36 36 H 1.08004 * 122.70746 * 179.72660 * 17 16 15 37 37 H 1.08997 * 109.47532 * 125.02330 * 19 18 17 38 38 H 0.96702 * 113.99714 * 180.02562 * 20 19 18 39 39 H 1.48500 * 109.99916 * 178.68271 * 21 19 18 40 40 H 1.48494 * 110.00279 * 300.00391 * 21 19 18 41 41 H 1.09004 * 113.61429 * 139.97915 * 23 11 10 42 42 H 1.08999 * 113.61478 * 270.88352 * 23 11 10 43 43 H 1.07994 * 120.02507 * 180.27489 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2917 2.3749 -0.0006 5 6 1.9213 3.6048 -0.0011 6 6 3.3019 3.6757 0.0041 7 6 4.0562 2.5167 -0.0007 8 6 5.5610 2.5978 -0.0003 9 1 6.0368 1.6365 -0.1945 10 6 6.1182 3.7455 -0.8588 11 6 7.1530 3.9721 0.2559 12 1 7.3508 5.0239 0.4627 13 7 8.3774 3.1852 0.0890 14 6 8.3040 1.8181 -0.4325 15 6 9.6052 3.7340 0.4245 16 7 9.7811 4.9306 0.8922 17 6 11.0241 5.2910 1.1580 18 6 11.9394 4.3559 0.9024 19 6 13.4257 4.4924 1.1101 20 8 14.0906 4.4332 -0.1535 21 14 13.7910 6.1259 1.9281 22 16 11.1083 2.9319 0.2819 23 6 6.1379 3.3352 1.2197 24 6 3.4315 1.2848 -0.0001 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3633 -1.0276 0.0005 28 1 0.2131 2.3200 -0.0002 29 1 1.3345 4.5114 -0.0012 30 1 3.7923 4.6380 0.0078 31 1 5.4222 4.5750 -0.9836 32 1 6.5562 3.4138 -1.8002 33 1 8.1850 1.1192 0.3955 34 1 7.4516 1.7315 -1.1063 35 1 9.2207 1.5864 -0.9747 36 1 11.2787 6.2662 1.5462 37 1 13.7799 3.6806 1.7454 38 1 15.0525 4.5144 -0.0959 39 1 15.2505 6.2590 2.1673 40 1 13.3129 7.2409 1.0717 41 1 6.5918 2.6722 1.9562 42 1 5.4473 4.0526 1.6630 43 1 4.0211 0.3800 0.0006 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10860588_15704118.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:38:22 Heat of formation + Delta-G solvation = 57.547851 kcal Electronic energy + Delta-G solvation = -25374.432889 eV Core-core repulsion = 21708.246215 eV Total energy + Delta-G solvation = -3666.186674 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.119 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.75282 -40.82138 -40.16047 -38.29457 -37.80814 -35.79378 -32.24995 -31.78635 -30.99386 -28.80117 -28.26607 -26.79543 -26.72150 -25.13223 -24.19857 -23.56202 -22.19241 -21.28522 -19.52556 -19.14823 -18.81238 -18.52013 -17.40418 -17.23641 -16.90591 -16.67363 -16.55321 -16.35011 -16.05889 -15.65482 -15.42283 -15.08640 -14.67811 -14.52939 -14.41059 -14.18320 -14.02002 -13.94017 -13.68924 -13.34323 -13.24078 -13.18799 -12.81580 -12.65358 -12.31122 -12.21713 -12.12223 -11.95209 -11.66530 -11.57365 -11.28863 -10.85760 -10.50589 -10.38544 -10.00659 -9.72894 -9.12149 -8.53912 -4.95735 0.03104 0.16486 0.35069 0.51929 0.80450 1.45127 1.59934 1.78965 1.98526 2.04295 2.31725 2.76010 3.31478 3.39594 3.54704 3.63504 3.69347 3.85603 3.90798 3.97840 3.99769 4.08019 4.14214 4.17932 4.20523 4.27478 4.27953 4.36317 4.50570 4.53546 4.57557 4.58735 4.63202 4.70086 4.74910 4.80050 4.91374 4.97263 5.07393 5.09301 5.27251 5.35972 5.50326 5.63584 5.76416 5.81217 6.06139 6.42760 6.45187 7.01086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.213 4.213 5 C -0.076 4.076 6 C -0.154 4.154 7 C -0.031 4.031 8 C -0.082 4.082 9 H 0.104 0.896 10 C -0.142 4.142 11 C 0.137 3.863 12 H 0.114 0.886 13 N -0.563 5.563 14 C 0.078 3.922 15 C 0.318 3.682 16 N -0.547 5.547 17 C 0.098 3.902 18 C -0.258 4.258 19 C -0.031 4.031 20 O -0.538 6.538 21 Si 0.696 3.304 22 S 0.124 5.876 23 C -0.138 4.138 24 C -0.149 4.149 25 H 0.056 0.944 26 H 0.056 0.944 27 H 0.101 0.899 28 H 0.127 0.873 29 H 0.125 0.875 30 H 0.125 0.875 31 H 0.102 0.898 32 H 0.077 0.923 33 H 0.064 0.936 34 H 0.092 0.908 35 H 0.070 0.930 36 H 0.175 0.825 37 H 0.075 0.925 38 H 0.380 0.620 39 H -0.257 1.257 40 H -0.251 1.251 41 H 0.075 0.925 42 H 0.097 0.903 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.789 -1.358 1.697 2.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.084 3.916 4 C -0.232 4.232 5 C -0.094 4.094 6 C -0.172 4.172 7 C -0.032 4.032 8 C -0.100 4.100 9 H 0.122 0.878 10 C -0.181 4.181 11 C 0.030 3.970 12 H 0.132 0.868 13 N -0.281 5.281 14 C -0.064 4.064 15 C -0.051 4.051 16 N -0.271 5.271 17 C -0.054 4.054 18 C -0.382 4.382 19 C -0.142 4.142 20 O -0.346 6.346 21 Si 0.595 3.405 22 S 0.375 5.625 23 C -0.177 4.177 24 C -0.168 4.168 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.120 0.880 28 H 0.145 0.855 29 H 0.143 0.857 30 H 0.143 0.857 31 H 0.120 0.880 32 H 0.095 0.905 33 H 0.082 0.918 34 H 0.110 0.890 35 H 0.089 0.911 36 H 0.191 0.809 37 H 0.093 0.907 38 H 0.229 0.771 39 H -0.182 1.182 40 H -0.175 1.175 41 H 0.094 0.906 42 H 0.116 0.884 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.201 -1.625 1.101 2.949 hybrid contribution 0.633 0.442 -0.498 0.918 sum -1.569 -1.182 0.603 2.055 Atomic orbital electron populations 1.23082 0.78097 1.04189 1.01437 1.86077 1.21613 1.26919 1.88589 1.19033 0.92318 0.84250 0.95978 1.21267 1.00150 0.92470 1.09292 1.20945 0.94593 0.97049 0.96854 1.20919 0.93626 0.98142 1.04548 1.19458 0.94711 0.92159 0.96823 1.21883 0.90868 0.99411 0.97859 0.87777 1.23555 0.97755 0.98875 0.97892 1.21961 0.82337 0.96443 0.96229 0.86840 1.45563 1.01036 1.14037 1.67429 1.22079 1.03845 0.80862 0.99620 1.23605 0.91646 0.92681 0.97137 1.66413 1.22982 1.14058 1.23660 1.21278 0.85646 0.99574 0.98883 1.24689 0.98400 0.97966 1.17103 1.24034 0.88500 1.11801 0.89860 1.86622 1.23886 1.95478 1.28586 0.94912 0.82735 0.75215 0.87677 1.83988 0.96720 1.17214 1.64596 1.23506 0.97825 1.00001 0.96391 1.20292 0.91307 0.98186 1.07004 0.92551 0.92552 0.88047 0.85517 0.85671 0.85713 0.87998 0.90461 0.91755 0.88999 0.91104 0.80855 0.90694 0.77147 1.18199 1.17518 0.90631 0.88439 0.85350 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.75 10.50 -19.42 -0.20 -0.96 16 3 C 0.13 0.30 6.69 -39.22 -0.26 0.03 16 4 C -0.21 -0.24 9.04 -39.43 -0.36 -0.60 16 5 C -0.08 -0.04 10.04 -39.61 -0.40 -0.43 16 6 C -0.15 -0.03 8.60 -39.56 -0.34 -0.37 16 7 C -0.03 -0.01 5.29 -104.65 -0.55 -0.57 16 8 C -0.08 0.10 3.31 -90.96 -0.30 -0.20 16 9 H 0.10 -0.20 5.50 -51.93 -0.29 -0.49 16 10 C -0.14 0.18 6.67 -25.92 -0.17 0.01 16 11 C 0.14 -0.01 4.55 -67.12 -0.31 -0.31 16 12 H 0.11 0.14 7.44 -51.93 -0.39 -0.24 16 13 N -0.56 -0.38 3.19 -175.33 -0.56 -0.94 16 14 C 0.08 -0.13 8.81 59.85 0.53 0.39 16 15 C 0.32 0.88 7.75 -87.69 -0.68 0.20 16 16 N -0.55 -2.18 9.70 -15.21 -0.15 -2.32 16 17 C 0.10 0.27 10.07 -19.14 -0.19 0.08 16 18 C -0.26 -0.65 5.95 -36.03 -0.21 -0.86 16 19 C -0.03 -0.02 3.07 36.01 0.11 0.09 16 20 O -0.54 -0.97 12.86 -35.23 -0.45 -1.42 16 21 Si 0.70 -0.50 30.50 -169.99 -5.18 -5.69 16 22 S 0.12 0.26 21.68 -107.50 -2.33 -2.07 16 23 C -0.14 0.11 7.21 -25.92 -0.19 -0.08 16 24 C -0.15 -0.24 9.65 -39.43 -0.38 -0.62 16 25 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 26 H 0.06 -0.11 7.66 -51.93 -0.40 -0.50 16 27 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 29 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 30 H 0.12 -0.17 6.68 -52.49 -0.35 -0.52 16 31 H 0.10 -0.18 6.33 -51.93 -0.33 -0.51 16 32 H 0.08 -0.09 7.36 -51.93 -0.38 -0.47 16 33 H 0.06 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.09 -0.26 4.83 -51.93 -0.25 -0.52 16 35 H 0.07 -0.13 7.04 -51.93 -0.37 -0.49 16 36 H 0.17 0.11 5.87 -52.48 -0.31 -0.20 16 37 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 38 H 0.38 -0.93 8.74 45.56 0.40 -0.53 16 39 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 40 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 41 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.10 -0.10 7.71 -51.93 -0.40 -0.50 16 43 H 0.13 0.09 8.05 -52.49 -0.42 -0.33 16 LS Contribution 356.77 15.07 5.38 5.38 Total: 0.00 -7.58 356.77 -11.73 -19.31 By element: Atomic # 1 Polarization: -3.50 SS G_CDS: -5.51 Total: -9.01 kcal Atomic # 6 Polarization: 0.43 SS G_CDS: -2.71 Total: -2.28 kcal Atomic # 7 Polarization: -2.56 SS G_CDS: -0.71 Total: -3.27 kcal Atomic # 8 Polarization: -1.72 SS G_CDS: -0.66 Total: -2.38 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.18 Total: -5.69 kcal Atomic # 16 Polarization: 0.26 SS G_CDS: -2.33 Total: -2.07 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -7.58 -11.73 -19.31 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10860588_15704118.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.858 kcal (2) G-P(sol) polarization free energy of solvation -7.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.275 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.727 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.311 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds