Wall clock time and date at job start Mon Mar 8 2021 03:38:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35895 * 117.00479 * 2 1 4 4 C 1.38715 * 120.05487 * 0.02562 * 3 2 1 5 5 C 1.38162 * 119.94397 * 179.97438 * 4 3 2 6 6 C 1.38246 * 120.05614 * 359.72736 * 5 4 3 7 7 C 1.38280 * 120.11054 * 0.54875 * 6 5 4 8 8 C 1.50700 * 119.97143 * 179.72678 * 7 6 5 9 9 H 1.09008 * 112.85066 * 190.91783 * 8 7 6 10 10 C 1.53771 * 113.69381 * 322.19112 * 8 7 6 11 11 C 1.53782 * 87.08476 * 139.98933 * 10 8 7 12 12 H 1.08999 * 113.61283 * 220.01758 * 11 10 8 13 13 N 1.46498 * 113.61054 * 89.12015 * 11 10 8 14 14 C 1.46499 * 120.00270 * 16.71089 * 13 11 10 15 15 C 1.38614 * 120.00085 * 196.71962 * 13 11 10 16 16 N 1.29677 * 124.95411 * 179.97438 * 15 13 11 17 17 C 1.32120 * 116.86830 * 179.97438 * 16 15 13 18 18 C 1.50707 * 122.71089 * 180.02562 * 17 16 15 19 19 O 1.42894 * 109.47326 * 304.61596 * 18 17 16 20 20 Si 1.86302 * 109.46858 * 64.61828 * 18 17 16 21 21 C 1.33329 * 114.57873 * 359.97438 * 17 16 15 22 22 C 1.50698 * 125.95093 * 180.02562 * 21 17 16 23 23 S 1.70973 * 124.94566 * 359.69054 * 15 13 11 24 24 C 1.53779 * 87.08000 * 334.56965 * 11 10 8 25 25 C 1.38123 * 120.05680 * 359.44989 * 7 6 5 26 26 H 1.08998 * 109.47574 * 59.99371 * 1 2 3 27 27 H 1.08999 * 109.47363 * 179.97438 * 1 2 3 28 28 H 1.09008 * 109.46632 * 299.99970 * 1 2 3 29 29 H 1.08004 * 120.02438 * 359.97438 * 4 3 2 30 30 H 1.08004 * 119.96993 * 180.02562 * 5 4 3 31 31 H 1.08005 * 119.94176 * 180.29488 * 6 5 4 32 32 H 1.09002 * 113.61486 * 254.54511 * 10 8 7 33 33 H 1.09001 * 113.61515 * 25.44434 * 10 8 7 34 34 H 1.08999 * 109.46989 * 84.49851 * 14 13 11 35 35 H 1.09000 * 109.47524 * 204.49014 * 14 13 11 36 36 H 1.08998 * 109.47358 * 324.49711 * 14 13 11 37 37 H 1.08997 * 109.46981 * 184.61454 * 18 17 16 38 38 H 0.96704 * 114.00079 * 59.99348 * 19 18 17 39 39 H 1.48494 * 110.00080 * 58.67928 * 20 18 17 40 40 H 1.48498 * 109.99900 * 180.02562 * 20 18 17 41 41 H 1.09001 * 109.47363 * 84.46747 * 22 21 17 42 42 H 1.08999 * 109.47364 * 204.47161 * 22 21 17 43 43 H 1.09005 * 109.47165 * 324.46733 * 22 21 17 44 44 H 1.08996 * 113.60956 * 270.88051 * 24 11 10 45 45 H 1.08999 * 113.61234 * 139.98176 * 24 11 10 46 46 H 1.07999 * 120.02752 * 180.29619 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2918 2.3749 0.0005 5 6 1.9215 3.6047 0.0011 6 6 3.3021 3.6756 0.0068 7 6 4.0563 2.5166 0.0005 8 6 5.5611 2.5976 0.0005 9 1 6.0368 1.6365 -0.1949 10 6 6.1181 3.7462 -0.8569 11 6 7.1532 3.9716 0.2579 12 1 7.3500 5.0235 0.4648 13 7 8.3775 3.1848 0.0896 14 6 8.6892 2.5837 -1.2095 15 6 9.2409 3.0089 1.1596 16 7 10.3468 2.3329 1.1186 17 6 11.0494 2.2691 2.2357 18 6 12.3534 1.5203 2.3359 19 8 12.1579 0.1659 1.9244 20 14 13.6195 2.3278 1.2334 21 6 10.5121 2.9215 3.2668 22 6 11.0940 3.0171 4.6536 23 16 9.0063 3.6573 2.7241 24 6 6.1384 3.3336 1.2212 25 6 3.4316 1.2847 0.0000 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5139 0.8901 29 1 0.2131 2.3200 0.0005 30 1 1.3346 4.5114 0.0019 31 1 3.7924 4.6379 0.0120 32 1 6.5557 3.4155 -1.7988 33 1 5.4221 4.5759 -0.9806 34 1 9.1904 3.3188 -1.8391 35 1 9.3430 1.7236 -1.0645 36 1 7.7663 2.2614 -1.6916 37 1 12.7049 1.5394 3.3675 38 1 11.8445 0.0727 1.0143 39 1 13.8086 3.7460 1.6310 40 1 14.9099 1.5984 1.3227 41 1 11.8185 3.8307 4.6884 42 1 10.2958 3.2104 5.3701 43 1 11.5888 2.0790 4.9054 44 1 5.4480 4.0505 1.6655 45 1 6.5925 2.6698 1.9569 46 1 4.0211 0.3798 -0.0001 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10860588_15704122.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:38:26 Heat of formation + Delta-G solvation = 47.375811 kcal Electronic energy + Delta-G solvation = -27833.765565 eV Core-core repulsion = 24011.600180 eV Total energy + Delta-G solvation = -3822.165385 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.134 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.77238 -40.97619 -40.43552 -38.34547 -37.34891 -35.82576 -33.18559 -32.16022 -31.03420 -29.40306 -28.53770 -28.30087 -26.72846 -25.96730 -25.46303 -23.79590 -23.52988 -22.06998 -20.51292 -19.98307 -19.11721 -18.62706 -17.79058 -17.54939 -17.25411 -16.98312 -16.75889 -16.68706 -16.43418 -15.95658 -15.62848 -15.22922 -15.19258 -14.71323 -14.44458 -14.30321 -14.13681 -14.02793 -13.99327 -13.93892 -13.61454 -13.45856 -13.33630 -13.13886 -12.90938 -12.79925 -12.70256 -12.35506 -12.30612 -12.05838 -11.79650 -11.69923 -11.65677 -11.55189 -10.79093 -10.48645 -10.28137 -9.87025 -9.75178 -9.15565 -8.43522 -4.84600 0.07698 0.23883 0.30661 0.47999 0.87436 1.34994 1.69601 1.74934 1.95894 2.17468 2.29471 2.70902 3.13515 3.29869 3.43721 3.58282 3.73101 3.77862 3.82309 3.96436 4.06241 4.09272 4.14794 4.16746 4.18969 4.24769 4.29153 4.39110 4.43796 4.46828 4.49770 4.54003 4.56537 4.58133 4.64605 4.68225 4.78296 4.84597 4.88477 4.94296 4.97306 5.03047 5.09014 5.23776 5.32663 5.46016 5.61146 5.77099 5.77737 6.02404 6.42650 6.67294 6.99573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.130 3.870 4 C -0.212 4.212 5 C -0.076 4.076 6 C -0.155 4.155 7 C -0.033 4.033 8 C -0.067 4.067 9 H 0.101 0.899 10 C -0.132 4.132 11 C 0.120 3.880 12 H 0.090 0.910 13 N -0.566 5.566 14 C 0.094 3.906 15 C 0.325 3.675 16 N -0.541 5.541 17 C 0.078 3.922 18 C -0.030 4.030 19 O -0.536 6.536 20 Si 0.704 3.296 21 C -0.259 4.259 22 C -0.071 4.071 23 S 0.104 5.896 24 C -0.145 4.145 25 C -0.147 4.147 26 H 0.056 0.944 27 H 0.101 0.899 28 H 0.056 0.944 29 H 0.127 0.873 30 H 0.126 0.874 31 H 0.125 0.875 32 H 0.088 0.912 33 H 0.105 0.895 34 H 0.056 0.944 35 H 0.084 0.916 36 H 0.073 0.927 37 H 0.118 0.882 38 H 0.383 0.617 39 H -0.259 1.259 40 H -0.250 1.250 41 H 0.071 0.929 42 H 0.069 0.931 43 H 0.077 0.923 44 H 0.101 0.899 45 H 0.079 0.921 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.145 2.692 -2.386 5.489 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.231 6.231 3 C 0.085 3.915 4 C -0.231 4.231 5 C -0.094 4.094 6 C -0.173 4.173 7 C -0.033 4.033 8 C -0.085 4.085 9 H 0.119 0.881 10 C -0.169 4.169 11 C 0.016 3.984 12 H 0.108 0.892 13 N -0.285 5.285 14 C -0.050 4.050 15 C -0.045 4.045 16 N -0.267 5.267 17 C -0.053 4.053 18 C -0.144 4.144 19 O -0.342 6.342 20 Si 0.605 3.395 21 C -0.382 4.382 22 C -0.131 4.131 23 S 0.355 5.645 24 C -0.184 4.184 25 C -0.166 4.166 26 H 0.075 0.925 27 H 0.120 0.880 28 H 0.075 0.925 29 H 0.145 0.855 30 H 0.144 0.856 31 H 0.142 0.858 32 H 0.106 0.894 33 H 0.124 0.876 34 H 0.074 0.926 35 H 0.103 0.897 36 H 0.091 0.909 37 H 0.136 0.864 38 H 0.231 0.769 39 H -0.184 1.184 40 H -0.174 1.174 41 H 0.090 0.910 42 H 0.088 0.912 43 H 0.096 0.904 44 H 0.120 0.880 45 H 0.098 0.902 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -3.825 3.185 -2.001 5.365 hybrid contribution -0.109 -0.355 0.546 0.660 sum -3.934 2.830 -1.455 5.060 Atomic orbital electron populations 1.23090 0.78060 1.04232 1.01433 1.86084 1.21637 1.26880 1.88529 1.19040 0.92303 0.84292 0.95864 1.21278 1.00186 0.92456 1.09161 1.20938 0.94564 0.97056 0.96875 1.20889 0.93648 0.98001 1.04761 1.19418 0.94547 0.92210 0.97115 1.21519 0.90826 0.99210 0.96963 0.88093 1.23441 0.96718 0.99202 0.97561 1.22068 0.82810 0.94652 0.98882 0.89246 1.45505 1.19815 1.55457 1.07764 1.21800 1.01596 0.98935 0.82682 1.23124 0.92213 0.96557 0.92601 1.65937 1.06749 1.25378 1.28622 1.20048 0.98253 0.99627 0.87361 1.24734 0.97446 0.86266 1.05930 1.86452 1.89465 1.22736 1.35510 0.93969 0.76799 0.78633 0.90131 1.25068 1.00252 1.10978 1.01856 1.20168 1.00468 1.02800 0.89632 1.83999 1.22789 1.53830 1.03857 1.23533 0.97767 1.00399 0.96694 1.20310 0.91339 0.98256 1.06690 0.92533 0.88021 0.92538 0.85471 0.85639 0.85754 0.89390 0.87643 0.92567 0.89686 0.90852 0.86428 0.76916 1.18354 1.17436 0.91031 0.91214 0.90445 0.88021 0.90221 0.85316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.74 10.50 -19.41 -0.20 -0.95 16 3 C 0.13 0.28 6.69 -39.21 -0.26 0.01 16 4 C -0.21 -0.16 9.04 -39.43 -0.36 -0.52 16 5 C -0.08 0.01 10.04 -39.61 -0.40 -0.39 16 6 C -0.15 0.09 8.59 -39.56 -0.34 -0.25 16 7 C -0.03 0.00 5.29 -104.65 -0.55 -0.55 16 8 C -0.07 0.10 3.76 -90.96 -0.34 -0.24 16 9 H 0.10 -0.09 8.00 -51.92 -0.42 -0.50 16 10 C -0.13 0.38 6.58 -25.92 -0.17 0.21 16 11 C 0.12 -0.22 4.00 -67.12 -0.27 -0.49 16 12 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 13 N -0.57 0.13 3.11 -175.34 -0.55 -0.42 16 14 C 0.09 -0.15 10.01 59.85 0.60 0.44 16 15 C 0.32 0.62 7.46 -87.68 -0.65 -0.04 16 16 N -0.54 -1.47 9.21 -11.36 -0.10 -1.57 16 17 C 0.08 0.22 4.97 -84.18 -0.42 -0.19 16 18 C -0.03 -0.06 2.88 36.01 0.10 0.04 16 19 O -0.54 -1.41 12.88 -35.23 -0.45 -1.87 16 20 Si 0.70 0.84 32.90 -169.99 -5.59 -4.75 16 21 C -0.26 -0.65 6.57 -36.02 -0.24 -0.88 16 22 C -0.07 -0.03 9.80 36.00 0.35 0.32 16 23 S 0.10 0.15 20.92 -107.50 -2.25 -2.10 16 24 C -0.15 0.21 6.67 -25.92 -0.17 0.04 16 25 C -0.15 -0.24 9.65 -39.43 -0.38 -0.62 16 26 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 27 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.06 -0.11 7.66 -51.92 -0.40 -0.51 16 29 H 0.13 -0.11 6.30 -52.48 -0.33 -0.45 16 30 H 0.13 -0.26 8.06 -52.48 -0.42 -0.68 16 31 H 0.12 -0.32 6.68 -52.48 -0.35 -0.67 16 32 H 0.09 -0.29 5.81 -51.93 -0.30 -0.59 16 33 H 0.11 -0.39 6.33 -51.93 -0.33 -0.72 16 34 H 0.06 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.08 -0.07 7.46 -51.93 -0.39 -0.46 16 36 H 0.07 -0.22 5.65 -51.93 -0.29 -0.52 16 37 H 0.12 0.16 6.19 -51.93 -0.32 -0.16 16 38 H 0.38 -0.04 8.62 45.56 0.39 0.35 16 39 H -0.26 -0.95 7.11 56.52 0.40 -0.55 16 40 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 41 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 42 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 43 H 0.08 0.00 6.99 -51.93 -0.36 -0.36 16 44 H 0.10 -0.22 7.71 -51.93 -0.40 -0.62 16 45 H 0.08 0.01 6.98 -51.93 -0.36 -0.36 16 46 H 0.13 0.15 8.05 -52.49 -0.42 -0.27 16 LS Contribution 380.41 15.07 5.73 5.73 Total: 0.00 -6.44 380.41 -12.34 -18.78 By element: Atomic # 1 Polarization: -4.31 SS G_CDS: -6.41 Total: -10.72 kcal Atomic # 6 Polarization: 0.37 SS G_CDS: -2.51 Total: -2.14 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.65 Total: -1.99 kcal Atomic # 8 Polarization: -2.16 SS G_CDS: -0.66 Total: -2.81 kcal Atomic # 14 Polarization: 0.84 SS G_CDS: -5.59 Total: -4.75 kcal Atomic # 16 Polarization: 0.15 SS G_CDS: -2.25 Total: -2.10 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -6.44 -12.34 -18.78 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10860588_15704122.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.155 kcal (2) G-P(sol) polarization free energy of solvation -6.443 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.779 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.376 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds