Wall clock time and date at job start Mon Mar 8 2021 03:38:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35903 * 117.00036 * 2 1 4 4 C 1.38714 * 120.05551 * 359.97361 * 3 2 1 5 5 C 1.38158 * 119.94076 * 180.02562 * 4 3 2 6 6 C 1.38244 * 120.05911 * 359.74816 * 5 4 3 7 7 C 1.38288 * 120.11276 * 0.51404 * 6 5 4 8 8 C 1.50697 * 119.97540 * 179.76765 * 7 6 5 9 9 H 1.09004 * 112.84782 * 168.52316 * 8 7 6 10 10 C 1.53778 * 113.61318 * 299.71880 * 8 7 6 11 11 C 1.53778 * 87.08415 * 139.98254 * 10 8 7 12 12 H 1.09000 * 113.61723 * 219.93739 * 11 10 8 13 13 N 1.46897 * 113.61506 * 89.11117 * 11 10 8 14 14 C 1.46897 * 111.00099 * 193.83015 * 13 11 10 15 15 C 1.39151 * 110.99610 * 69.87989 * 13 11 10 16 16 N 1.32333 * 119.71910 * 359.97438 * 15 13 11 17 17 C 1.32014 * 121.64916 * 179.70644 * 16 15 13 18 18 C 1.37986 * 120.89293 * 0.57877 * 17 16 15 19 19 C 1.50703 * 120.32115 * 179.73043 * 18 17 16 20 20 O 1.42901 * 109.47041 * 244.72318 * 19 18 17 21 21 Si 1.86302 * 109.47088 * 4.72137 * 19 18 17 22 22 C 1.38898 * 119.35101 * 359.45267 * 18 17 16 23 23 C 1.38445 * 118.48452 * 0.25668 * 22 18 17 24 24 F 1.35100 * 120.46973 * 179.97438 * 23 22 18 25 25 C 1.53785 * 113.61386 * 37.21502 * 8 7 6 26 26 C 1.38124 * 120.04893 * 359.48253 * 7 6 5 27 27 H 1.08992 * 109.47341 * 180.02562 * 1 2 3 28 28 H 1.09005 * 109.47075 * 300.00149 * 1 2 3 29 29 H 1.09000 * 109.46990 * 59.99769 * 1 2 3 30 30 H 1.08002 * 120.02753 * 0.02562 * 4 3 2 31 31 H 1.08003 * 119.97088 * 180.02562 * 5 4 3 32 32 H 1.08003 * 119.94578 * 180.24988 * 6 5 4 33 33 H 1.09003 * 113.61560 * 25.43246 * 10 8 7 34 34 H 1.09006 * 113.61349 * 254.53131 * 10 8 7 35 35 H 1.09001 * 109.47314 * 289.67577 * 14 13 11 36 36 H 1.09000 * 109.47279 * 49.67908 * 14 13 11 37 37 H 1.09004 * 109.47125 * 169.67363 * 14 13 11 38 38 H 1.07999 * 119.55105 * 180.30791 * 17 16 15 39 39 H 1.08997 * 109.46688 * 124.72193 * 19 18 17 40 40 H 0.96699 * 113.99697 * 180.02562 * 20 19 18 41 41 H 1.48502 * 109.99895 * 178.67925 * 21 19 18 42 42 H 1.48492 * 110.00138 * 300.00078 * 21 19 18 43 43 H 1.08000 * 120.75800 * 180.22768 * 22 18 17 44 44 H 1.09007 * 113.60972 * 105.47194 * 25 8 7 45 45 H 1.08993 * 113.61727 * 334.56685 * 25 8 7 46 46 H 1.08003 * 120.02474 * 180.23422 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2916 2.3750 -0.0006 5 6 1.9213 3.6047 -0.0011 6 6 3.3019 3.6757 0.0042 7 6 4.0563 2.5167 -0.0007 8 6 5.5611 2.5978 -0.0002 9 1 6.0366 1.6367 0.1955 10 6 6.1387 3.3336 -1.2207 11 6 7.1518 3.9735 -0.2569 12 1 7.3487 5.0251 -0.4653 13 7 8.3801 3.1860 -0.0864 14 6 9.1535 3.6605 1.0689 15 6 9.1507 3.2070 -1.2449 16 7 8.7286 3.8830 -2.3014 17 6 9.4316 3.9333 -3.4176 18 6 10.6354 3.2679 -3.5274 19 6 11.4244 3.3292 -4.8099 20 8 11.4953 2.0244 -5.3884 21 14 10.5856 4.4914 -6.0001 22 6 11.1156 2.5459 -2.4424 23 6 10.3599 2.5157 -1.2828 24 9 10.7886 1.8254 -0.2034 25 6 6.1158 3.7478 0.8570 26 6 3.4315 1.2849 -0.0001 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 0.2130 2.3200 -0.0006 31 1 1.3345 4.5114 -0.0011 32 1 3.7923 4.6380 0.0078 33 1 5.4478 4.0494 -1.6663 34 1 6.5943 2.6698 -1.9555 35 1 9.5807 4.6377 0.8436 36 1 8.4983 3.7415 1.9362 37 1 9.9554 2.9542 1.2841 38 1 9.0573 4.4994 -4.2578 39 1 12.4317 3.6888 -4.5999 40 1 11.9902 1.9886 -6.2184 41 1 11.3710 4.5852 -7.2570 42 1 9.2113 4.0123 -6.2945 43 1 12.0568 2.0196 -2.5021 44 1 6.5529 3.4181 1.7996 45 1 5.4187 4.5767 0.9794 46 1 4.0211 0.3799 -0.0001 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10860588_17656566.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:38:29 Heat of formation + Delta-G solvation = 7.121361 kcal Electronic energy + Delta-G solvation = -29908.038246 eV Core-core repulsion = 25681.058694 eV Total energy + Delta-G solvation = -4226.979552 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -49.93049 -41.99050 -41.12957 -40.19973 -38.47207 -37.80734 -36.21555 -33.52885 -32.21709 -31.70659 -30.84947 -28.25227 -28.22315 -26.63032 -26.26695 -25.23959 -24.56785 -23.45479 -22.79657 -21.87853 -20.07140 -18.88535 -18.79108 -18.58707 -18.11913 -17.94538 -17.19490 -17.09218 -16.76070 -16.59258 -16.47630 -16.14357 -15.97808 -15.79507 -15.28020 -15.10340 -14.85763 -14.38040 -14.35031 -14.26597 -14.14066 -14.01234 -13.86440 -13.82676 -13.32954 -13.21739 -12.88831 -12.71373 -12.62182 -12.54484 -12.17788 -12.05288 -11.87906 -11.66073 -11.47572 -11.24355 -10.95087 -10.77140 -10.54353 -10.51578 -9.60567 -9.10698 -9.02535 -5.08388 -0.21916 0.00929 0.45942 0.61383 1.12425 1.48473 1.84709 2.19776 2.40253 2.43207 2.86971 3.07220 3.10000 3.26710 3.54017 3.59383 3.68535 3.77211 3.84939 3.94342 3.98867 4.10245 4.15742 4.17479 4.22117 4.23665 4.26561 4.29311 4.32893 4.46850 4.48320 4.59050 4.62735 4.66304 4.74497 4.76866 4.80153 4.84884 4.90968 4.97952 5.10906 5.17204 5.25589 5.27595 5.31914 5.46188 5.59677 5.68991 5.82560 5.92658 5.99875 6.30564 6.54321 6.74465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.319 6.319 3 C 0.129 3.871 4 C -0.215 4.215 5 C -0.078 4.078 6 C -0.155 4.155 7 C -0.030 4.030 8 C -0.069 4.069 9 H 0.102 0.898 10 C -0.102 4.102 11 C 0.067 3.933 12 H 0.074 0.926 13 N -0.460 5.460 14 C 0.015 3.985 15 C 0.298 3.702 16 N -0.481 5.481 17 C 0.124 3.876 18 C -0.128 4.128 19 C -0.068 4.068 20 O -0.535 6.535 21 Si 0.682 3.318 22 C -0.060 4.060 23 C 0.034 3.966 24 F -0.122 7.122 25 C -0.125 4.125 26 C -0.149 4.149 27 H 0.100 0.900 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.126 0.874 31 H 0.124 0.876 32 H 0.124 0.876 33 H 0.091 0.909 34 H 0.073 0.927 35 H 0.042 0.958 36 H 0.088 0.912 37 H 0.089 0.911 38 H 0.165 0.835 39 H 0.081 0.919 40 H 0.383 0.617 41 H -0.256 1.256 42 H -0.250 1.250 43 H 0.151 0.849 44 H 0.076 0.924 45 H 0.095 0.905 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.040 4.639 -0.434 4.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.083 3.917 4 C -0.233 4.233 5 C -0.096 4.096 6 C -0.173 4.173 7 C -0.030 4.030 8 C -0.087 4.087 9 H 0.120 0.880 10 C -0.140 4.140 11 C -0.040 4.040 12 H 0.092 0.908 13 N -0.177 5.177 14 C -0.130 4.130 15 C 0.064 3.936 16 N -0.194 5.194 17 C -0.033 4.033 18 C -0.131 4.131 19 C -0.178 4.178 20 O -0.343 6.343 21 Si 0.582 3.418 22 C -0.086 4.086 23 C 0.010 3.990 24 F -0.101 7.101 25 C -0.163 4.163 26 C -0.167 4.167 27 H 0.119 0.881 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.144 0.856 31 H 0.142 0.858 32 H 0.142 0.858 33 H 0.109 0.891 34 H 0.092 0.908 35 H 0.061 0.939 36 H 0.107 0.893 37 H 0.108 0.892 38 H 0.181 0.819 39 H 0.099 0.901 40 H 0.231 0.769 41 H -0.181 1.181 42 H -0.174 1.174 43 H 0.169 0.831 44 H 0.095 0.905 45 H 0.114 0.886 46 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -0.577 4.320 -0.417 4.379 hybrid contribution 1.339 -0.876 -0.576 1.701 sum 0.762 3.444 -0.993 3.664 Atomic orbital electron populations 1.23070 0.78215 1.04104 1.01383 1.86082 1.21517 1.26977 1.88629 1.19045 0.92324 0.84213 0.96075 1.21238 1.00046 0.92477 1.09583 1.20925 0.94596 0.96971 0.97081 1.20905 0.93563 0.98119 1.04729 1.19565 0.95095 0.92050 0.96261 1.21561 0.89954 0.99502 0.97719 0.87969 1.22916 0.96286 0.99161 0.95612 1.22565 0.87465 0.95784 0.98227 0.90837 1.58990 1.05457 1.51702 1.01525 1.22676 0.98864 0.99833 0.91658 1.19951 0.88904 0.92701 0.92060 1.67785 1.33537 1.18003 1.00052 1.22456 0.89777 0.96031 0.95059 1.20003 0.96918 1.01176 0.95036 1.24633 1.03630 0.91828 0.97747 1.86596 1.78240 1.27154 1.42295 0.95122 0.80177 0.86584 0.79911 1.21380 1.00270 0.96743 0.90233 1.18071 0.95360 0.99586 0.85999 1.91488 1.89436 1.76918 1.52226 1.23225 0.97093 0.98656 0.97319 1.20330 0.91244 0.98356 1.06804 0.88124 0.92593 0.92600 0.85601 0.85771 0.85788 0.89100 0.90834 0.93881 0.89325 0.89200 0.81879 0.90113 0.76870 1.18086 1.17404 0.83134 0.90496 0.88642 0.85354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 9.81 101.05 0.99 0.99 16 2 O -0.32 -1.12 10.50 -19.43 -0.20 -1.33 16 3 C 0.13 0.45 6.69 -39.22 -0.26 0.19 16 4 C -0.21 -0.45 9.04 -39.43 -0.36 -0.80 16 5 C -0.08 -0.10 10.04 -39.61 -0.40 -0.50 16 6 C -0.16 -0.19 8.62 -39.56 -0.34 -0.54 16 7 C -0.03 -0.06 5.29 -104.65 -0.55 -0.61 16 8 C -0.07 -0.08 3.89 -90.96 -0.35 -0.43 16 9 H 0.10 0.21 8.09 -51.93 -0.42 -0.21 16 10 C -0.10 -0.13 6.53 -25.92 -0.17 -0.29 16 11 C 0.07 0.04 2.57 -66.90 -0.17 -0.14 16 12 H 0.07 0.04 8.07 -51.93 -0.42 -0.37 16 13 N -0.46 -0.67 4.58 -172.41 -0.79 -1.46 16 14 C 0.02 0.00 9.10 60.06 0.55 0.54 16 15 C 0.30 0.71 6.00 -154.85 -0.93 -0.22 16 16 N -0.48 -1.01 7.79 -12.36 -0.10 -1.11 16 17 C 0.12 0.09 9.84 -17.57 -0.17 -0.08 16 18 C -0.13 -0.07 5.39 -104.47 -0.56 -0.63 16 19 C -0.07 0.09 2.81 36.01 0.10 0.19 16 20 O -0.54 -0.10 12.82 -35.23 -0.45 -0.55 16 21 Si 0.68 -1.42 29.87 -169.99 -5.08 -6.50 16 22 C -0.06 -0.07 9.82 -39.26 -0.39 -0.46 16 23 C 0.03 0.08 7.01 -39.10 -0.27 -0.19 16 24 F -0.12 -0.35 14.87 2.25 0.03 -0.31 16 25 C -0.13 0.05 6.93 -25.91 -0.18 -0.13 16 26 C -0.15 -0.50 9.65 -39.43 -0.38 -0.88 16 27 H 0.10 -0.18 8.14 -51.93 -0.42 -0.60 16 28 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 29 H 0.06 -0.06 7.66 -51.93 -0.40 -0.45 16 30 H 0.13 0.03 6.30 -52.49 -0.33 -0.30 16 31 H 0.12 -0.09 8.06 -52.48 -0.42 -0.52 16 32 H 0.12 -0.07 6.64 -52.48 -0.35 -0.41 16 33 H 0.09 0.07 7.73 -51.93 -0.40 -0.33 16 34 H 0.07 0.23 7.26 -51.93 -0.38 -0.15 16 35 H 0.04 -0.02 8.10 -51.93 -0.42 -0.44 16 36 H 0.09 -0.14 6.58 -51.93 -0.34 -0.48 16 37 H 0.09 0.01 5.96 -51.93 -0.31 -0.30 16 38 H 0.16 -0.22 4.87 -52.49 -0.26 -0.48 16 39 H 0.08 -0.26 7.96 -51.93 -0.41 -0.67 16 40 H 0.38 -1.46 8.74 45.56 0.40 -1.06 16 41 H -0.26 0.01 7.11 56.52 0.40 0.41 16 42 H -0.25 -0.25 7.06 56.52 0.40 0.15 16 43 H 0.15 -0.02 8.06 -52.49 -0.42 -0.45 16 44 H 0.08 -0.04 6.84 -51.93 -0.36 -0.39 16 45 H 0.10 -0.12 6.29 -51.93 -0.33 -0.45 16 46 H 0.13 0.37 8.05 -52.48 -0.42 -0.05 16 LS Contribution 370.67 15.07 5.59 5.59 Total: 0.00 -6.83 370.67 -10.86 -17.69 By element: Atomic # 1 Polarization: -2.01 SS G_CDS: -6.01 Total: -8.02 kcal Atomic # 6 Polarization: -0.15 SS G_CDS: -3.85 Total: -4.01 kcal Atomic # 7 Polarization: -1.68 SS G_CDS: -0.89 Total: -2.57 kcal Atomic # 8 Polarization: -1.22 SS G_CDS: -0.66 Total: -1.87 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.03 Total: -0.31 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.08 Total: -6.50 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -6.83 -10.86 -17.69 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10860588_17656566.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.814 kcal (2) G-P(sol) polarization free energy of solvation -6.834 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.979 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.858 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.692 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds