Wall clock time and date at job start Mon Mar 8 2021 06:21:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53002 * 109.46774 * 2 1 4 4 O 1.42895 * 109.46698 * 119.99414 * 2 1 3 5 5 C 1.42904 * 114.00026 * 90.00425 * 4 2 1 6 6 H 1.08997 * 112.84765 * 341.19820 * 5 4 2 7 7 C 1.53784 * 113.61449 * 112.49775 * 5 4 2 8 8 C 1.53781 * 87.07940 * 139.98636 * 7 5 4 9 9 H 1.08993 * 113.69211 * 89.13090 * 8 7 5 10 10 N 1.46506 * 113.61096 * 220.02177 * 8 7 5 11 11 C 1.38405 * 119.99523 * 252.49698 * 10 8 7 12 12 N 1.32495 * 119.21923 * 359.72624 * 11 10 8 13 13 C 1.32284 * 120.73551 * 179.71488 * 12 11 10 14 14 C 1.38600 * 119.19859 * 0.55431 * 13 12 11 15 15 C 1.50706 * 120.71890 * 179.70216 * 14 13 12 16 16 O 1.42896 * 109.46937 * 245.02287 * 15 14 13 17 17 Si 1.86294 * 109.46990 * 5.02230 * 15 14 13 18 18 C 1.38605 * 118.55787 * 359.72626 * 14 13 12 19 19 N 1.32274 * 119.19841 * 359.97438 * 18 14 13 20 20 C 1.53776 * 113.61783 * 209.99673 * 5 4 2 21 21 H 1.08999 * 109.46852 * 60.00782 * 1 2 3 22 22 H 1.09005 * 109.46643 * 179.97438 * 1 2 3 23 23 H 1.08998 * 109.47543 * 300.00188 * 1 2 3 24 24 H 1.08998 * 109.47543 * 239.99812 * 2 1 3 25 25 H 1.09001 * 109.46805 * 179.97438 * 3 2 1 26 26 H 1.08998 * 109.46954 * 299.99781 * 3 2 1 27 27 H 1.08998 * 109.47239 * 59.99625 * 3 2 1 28 28 H 1.08993 * 113.61455 * 25.43529 * 7 5 4 29 29 H 1.09001 * 113.61130 * 254.53173 * 7 5 4 30 30 H 0.96995 * 119.99814 * 72.49438 * 10 8 7 31 31 H 1.08002 * 120.39582 * 180.30087 * 13 12 11 32 32 H 1.09003 * 109.46707 * 125.02331 * 15 14 13 33 33 H 0.96703 * 113.99612 * 180.02562 * 16 15 14 34 34 H 1.48501 * 110.00369 * 299.99786 * 17 15 14 35 35 H 1.48506 * 110.00321 * 61.31883 * 17 15 14 36 36 H 1.08003 * 120.39659 * 180.02562 * 18 14 13 37 37 H 1.09000 * 113.61218 * 105.47050 * 20 5 4 38 38 H 1.08997 * 113.69159 * 334.58262 * 20 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 2.0063 -0.6735 1.1668 5 6 2.2001 -2.0781 0.9888 6 1 1.6628 -2.4736 0.1268 7 6 3.6751 -2.5089 1.0482 8 6 3.2023 -3.7391 1.8405 9 1 2.9400 -4.5903 1.2123 10 7 4.0911 -4.1014 2.9474 11 6 4.8895 -5.2281 2.8534 12 7 4.8335 -5.9709 1.7576 13 6 5.5873 -7.0508 1.6337 14 6 6.4336 -7.4074 2.6718 15 6 7.3025 -8.6345 2.5697 16 8 6.8951 -9.5895 3.5515 17 14 7.1294 -9.3784 0.8705 18 6 6.4631 -6.6112 3.8060 19 7 5.6878 -5.5410 3.8634 20 6 1.9909 -2.8966 2.2737 21 1 -0.3633 0.5137 -0.8901 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3634 0.5138 0.8899 24 1 1.8934 -0.5138 -0.8899 25 1 3.1300 1.4426 0.0005 26 1 1.6766 1.9563 -0.8900 27 1 1.6766 1.9564 0.8899 28 1 4.3045 -1.8325 1.6265 29 1 4.0982 -2.7532 0.0738 30 1 4.1201 -3.5516 3.7459 31 1 5.5408 -7.6496 0.7361 32 1 8.3429 -8.3583 2.7412 33 1 7.4126 -10.4065 3.5440 34 1 5.7153 -9.7593 0.6244 35 1 7.5799 -8.4063 -0.1578 36 1 7.1118 -6.8612 4.6324 37 1 1.0544 -3.4540 2.2887 38 1 2.1593 -2.3274 3.1879 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10905400_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:16 Heat of formation + Delta-G solvation = 9.452056 kcal Electronic energy + Delta-G solvation = -19835.088777 eV Core-core repulsion = 16680.680537 eV Total energy + Delta-G solvation = -3154.408240 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.142 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.08370 -40.66488 -38.40245 -37.80110 -35.44179 -34.67717 -33.16561 -31.96687 -28.20901 -26.98285 -26.76309 -25.96459 -24.62130 -22.92613 -22.25598 -21.04302 -19.39303 -18.89136 -18.40384 -17.81520 -16.81110 -16.50915 -16.28271 -15.88069 -15.84111 -15.65584 -15.18107 -15.01956 -14.67003 -14.27775 -14.03914 -13.66859 -13.55665 -13.34318 -13.18594 -13.11599 -12.77943 -12.38041 -12.21275 -12.03267 -11.94771 -11.82438 -11.75119 -11.61484 -11.19940 -10.57585 -10.42493 -9.95647 -9.07288 -5.06787 0.06150 0.17256 1.20656 1.57152 1.78565 1.88014 2.71626 2.78535 3.11928 3.36372 3.42439 3.49976 3.58537 3.75743 3.78932 3.81903 3.88820 3.95713 4.07813 4.11397 4.22335 4.31552 4.46627 4.61689 4.64949 4.69838 4.72662 4.77202 4.82852 4.86788 4.92501 4.94573 5.05582 5.22406 5.24900 5.32463 5.79837 6.00713 6.32152 6.42514 6.58272 7.30047 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.079 3.921 3 C -0.151 4.151 4 O -0.365 6.365 5 C 0.068 3.932 6 H 0.092 0.908 7 C -0.169 4.169 8 C 0.140 3.860 9 H 0.122 0.878 10 N -0.681 5.681 11 C 0.568 3.432 12 N -0.562 5.562 13 C 0.194 3.806 14 C -0.249 4.249 15 C -0.050 4.050 16 O -0.548 6.548 17 Si 0.680 3.320 18 C 0.227 3.773 19 N -0.567 5.567 20 C -0.145 4.145 21 H 0.066 0.934 22 H 0.056 0.944 23 H 0.064 0.936 24 H 0.061 0.939 25 H 0.061 0.939 26 H 0.070 0.930 27 H 0.064 0.936 28 H 0.094 0.906 29 H 0.074 0.926 30 H 0.417 0.583 31 H 0.158 0.842 32 H 0.076 0.924 33 H 0.384 0.616 34 H -0.249 1.249 35 H -0.253 1.253 36 H 0.173 0.827 37 H 0.082 0.918 38 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.970 -2.308 -2.193 3.744 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.022 3.978 3 C -0.208 4.208 4 O -0.284 6.284 5 C 0.009 3.991 6 H 0.110 0.890 7 C -0.209 4.209 8 C 0.033 3.967 9 H 0.140 0.860 10 N -0.316 5.316 11 C 0.212 3.788 12 N -0.284 5.284 13 C 0.027 3.973 14 C -0.257 4.257 15 C -0.162 4.162 16 O -0.354 6.354 17 Si 0.582 3.418 18 C 0.059 3.941 19 N -0.289 5.289 20 C -0.183 4.183 21 H 0.085 0.915 22 H 0.075 0.925 23 H 0.083 0.917 24 H 0.079 0.921 25 H 0.080 0.920 26 H 0.089 0.911 27 H 0.083 0.917 28 H 0.112 0.888 29 H 0.093 0.907 30 H 0.255 0.745 31 H 0.174 0.826 32 H 0.094 0.906 33 H 0.231 0.769 34 H -0.173 1.173 35 H -0.177 1.177 36 H 0.190 0.810 37 H 0.100 0.900 38 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 0.449 -0.772 -2.756 2.897 hybrid contribution 0.476 -0.227 0.356 0.636 sum 0.925 -0.998 -2.400 2.759 Atomic orbital electron populations 1.22335 0.95824 1.02396 1.02818 1.22173 0.93701 0.93970 0.87997 1.21873 1.01841 0.94402 1.02716 1.87993 1.85808 1.19082 1.35545 1.23385 0.95849 0.81783 0.98059 0.89038 1.24073 0.97644 0.97614 1.01556 1.22246 0.89411 0.96574 0.88420 0.86027 1.44119 1.42059 1.24529 1.20905 1.19402 0.87020 0.87214 0.85182 1.67878 1.26836 1.08480 1.25228 1.22607 0.87268 0.90744 0.96698 1.20715 1.05296 1.00863 0.98840 1.24301 0.98234 0.89669 1.04035 1.86495 1.61906 1.29735 1.57278 0.95071 0.84137 0.87764 0.74878 1.22837 0.90554 0.85615 0.95111 1.68004 1.10781 1.20631 1.29457 1.23653 0.98421 0.97095 0.99139 0.91540 0.92494 0.91663 0.92119 0.91978 0.91129 0.91701 0.88782 0.90679 0.74517 0.82568 0.90619 0.76861 1.17332 1.17737 0.81041 0.89973 0.88425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.06 9.53 37.16 0.35 0.41 16 2 C 0.08 0.03 3.22 -26.73 -0.09 -0.06 16 3 C -0.15 0.02 9.56 37.16 0.36 0.37 16 4 O -0.37 -0.68 10.00 -35.23 -0.35 -1.03 16 5 C 0.07 0.01 4.13 -25.92 -0.11 -0.10 16 6 H 0.09 -0.09 7.77 -51.93 -0.40 -0.49 16 7 C -0.17 -0.10 7.71 -25.92 -0.20 -0.30 16 8 C 0.14 0.10 4.25 -67.12 -0.29 -0.18 16 9 H 0.12 0.17 7.36 -51.93 -0.38 -0.22 16 10 N -0.68 -1.37 5.50 -55.00 -0.30 -1.67 16 11 C 0.57 2.44 8.42 -322.81 -2.72 -0.28 16 12 N -0.56 -2.52 9.13 -13.93 -0.13 -2.65 16 13 C 0.19 0.64 9.92 -17.22 -0.17 0.47 16 14 C -0.25 -0.56 5.40 -104.35 -0.56 -1.13 16 15 C -0.05 0.04 2.82 36.01 0.10 0.15 16 16 O -0.55 0.35 12.82 -35.23 -0.45 -0.10 16 17 Si 0.68 -1.26 29.92 -169.99 -5.09 -6.34 16 18 C 0.23 0.61 10.99 -17.23 -0.19 0.42 16 19 N -0.57 -2.48 10.46 -13.93 -0.15 -2.63 16 20 C -0.14 0.03 7.66 -25.92 -0.20 -0.16 16 21 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 22 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 23 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 24 H 0.06 -0.03 7.72 -51.93 -0.40 -0.43 16 25 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 26 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 27 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 28 H 0.09 0.14 8.14 -51.93 -0.42 -0.29 16 29 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.42 0.37 8.84 -40.82 -0.36 0.01 16 31 H 0.16 0.29 5.04 -52.49 -0.26 0.03 16 32 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 33 H 0.38 -2.18 8.74 45.56 0.40 -1.78 16 34 H -0.25 -0.31 7.06 56.52 0.40 0.09 16 35 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 36 H 0.17 0.02 8.06 -52.48 -0.42 -0.40 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.10 0.00 8.12 -51.93 -0.42 -0.42 16 LS Contribution 318.51 15.07 4.80 4.80 Total: 0.00 -6.78 318.51 -11.05 -17.83 By element: Atomic # 1 Polarization: -2.15 SS G_CDS: -5.68 Total: -7.82 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: -3.71 Total: -0.38 kcal Atomic # 7 Polarization: -6.37 SS G_CDS: -0.58 Total: -6.95 kcal Atomic # 8 Polarization: -0.33 SS G_CDS: -0.80 Total: -1.13 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.09 Total: -6.34 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -6.78 -11.05 -17.83 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10905400_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.281 kcal (2) G-P(sol) polarization free energy of solvation -6.778 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.503 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.829 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds