Wall clock time and date at job start Mon Mar 8 2021 06:21:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53002 * 109.46774 * 2 1 4 4 O 1.42895 * 109.46698 * 119.99414 * 2 1 3 5 5 C 1.42904 * 114.00026 * 90.00425 * 4 2 1 6 6 H 1.08997 * 112.84765 * 341.19820 * 5 4 2 7 7 C 1.53784 * 113.61449 * 112.49775 * 5 4 2 8 8 C 1.53781 * 87.07940 * 139.98636 * 7 5 4 9 9 H 1.08993 * 113.69211 * 89.13090 * 8 7 5 10 10 N 1.46506 * 113.61096 * 220.02177 * 8 7 5 11 11 C 1.38405 * 119.99523 * 252.49698 * 10 8 7 12 12 N 1.32495 * 119.21923 * 359.72624 * 11 10 8 13 13 C 1.32284 * 120.73551 * 179.71488 * 12 11 10 14 14 C 1.38600 * 119.19859 * 0.55431 * 13 12 11 15 15 C 1.50706 * 120.71890 * 179.70216 * 14 13 12 16 16 O 1.42896 * 109.46937 * 245.02287 * 15 14 13 17 17 Si 1.86294 * 109.46990 * 5.02230 * 15 14 13 18 18 C 1.38605 * 118.55787 * 359.72626 * 14 13 12 19 19 N 1.32274 * 119.19841 * 359.97438 * 18 14 13 20 20 C 1.53776 * 113.61783 * 209.99673 * 5 4 2 21 21 H 1.08999 * 109.46852 * 60.00782 * 1 2 3 22 22 H 1.09005 * 109.46643 * 179.97438 * 1 2 3 23 23 H 1.08998 * 109.47543 * 300.00188 * 1 2 3 24 24 H 1.08998 * 109.47543 * 239.99812 * 2 1 3 25 25 H 1.09001 * 109.46805 * 179.97438 * 3 2 1 26 26 H 1.08998 * 109.46954 * 299.99781 * 3 2 1 27 27 H 1.08998 * 109.47239 * 59.99625 * 3 2 1 28 28 H 1.08993 * 113.61455 * 25.43529 * 7 5 4 29 29 H 1.09001 * 113.61130 * 254.53173 * 7 5 4 30 30 H 0.96995 * 119.99814 * 72.49438 * 10 8 7 31 31 H 1.08002 * 120.39582 * 180.30087 * 13 12 11 32 32 H 1.09003 * 109.46707 * 125.02331 * 15 14 13 33 33 H 0.96703 * 113.99612 * 180.02562 * 16 15 14 34 34 H 1.48501 * 110.00369 * 299.99786 * 17 15 14 35 35 H 1.48506 * 110.00321 * 61.31883 * 17 15 14 36 36 H 1.08003 * 120.39659 * 180.02562 * 18 14 13 37 37 H 1.09000 * 113.61218 * 105.47050 * 20 5 4 38 38 H 1.08997 * 113.69159 * 334.58262 * 20 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 2.0063 -0.6735 1.1668 5 6 2.2001 -2.0781 0.9888 6 1 1.6628 -2.4736 0.1268 7 6 3.6751 -2.5089 1.0482 8 6 3.2023 -3.7391 1.8405 9 1 2.9400 -4.5903 1.2123 10 7 4.0911 -4.1014 2.9474 11 6 4.8895 -5.2281 2.8534 12 7 4.8335 -5.9709 1.7576 13 6 5.5873 -7.0508 1.6337 14 6 6.4336 -7.4074 2.6718 15 6 7.3025 -8.6345 2.5697 16 8 6.8951 -9.5895 3.5515 17 14 7.1294 -9.3784 0.8705 18 6 6.4631 -6.6112 3.8060 19 7 5.6878 -5.5410 3.8634 20 6 1.9909 -2.8966 2.2737 21 1 -0.3633 0.5137 -0.8901 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3634 0.5138 0.8899 24 1 1.8934 -0.5138 -0.8899 25 1 3.1300 1.4426 0.0005 26 1 1.6766 1.9563 -0.8900 27 1 1.6766 1.9564 0.8899 28 1 4.3045 -1.8325 1.6265 29 1 4.0982 -2.7532 0.0738 30 1 4.1201 -3.5516 3.7459 31 1 5.5408 -7.6496 0.7361 32 1 8.3429 -8.3583 2.7412 33 1 7.4126 -10.4065 3.5440 34 1 5.7153 -9.7593 0.6244 35 1 7.5799 -8.4063 -0.1578 36 1 7.1118 -6.8612 4.6324 37 1 1.0544 -3.4540 2.2887 38 1 2.1593 -2.3274 3.1879 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_10905400_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:16 Heat of formation + Delta-G solvation = 12.168092 kcal Electronic energy + Delta-G solvation = -19834.971001 eV Core-core repulsion = 16680.680537 eV Total energy + Delta-G solvation = -3154.290464 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.142 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.26899 -40.72480 -38.44582 -37.74931 -35.53705 -34.89682 -33.20341 -32.06816 -28.18383 -27.04736 -26.80744 -26.14408 -24.68680 -23.04560 -22.26492 -21.11956 -19.54580 -19.01931 -18.31186 -17.89360 -16.86407 -16.55323 -16.43481 -15.99077 -15.91774 -15.71964 -15.17252 -15.07938 -14.75839 -14.32559 -14.08104 -13.67814 -13.60451 -13.36777 -13.18377 -13.12832 -12.79354 -12.43014 -12.29367 -12.06163 -12.05587 -11.97035 -11.82587 -11.62637 -11.29683 -10.60694 -10.46924 -10.05188 -9.22324 -4.94895 -0.14405 -0.02408 1.31451 1.64737 1.67016 1.96714 2.59801 2.68815 2.95217 3.35790 3.42503 3.45001 3.46810 3.62463 3.74353 3.80316 3.87669 3.96433 4.08288 4.10059 4.24552 4.29005 4.51203 4.56645 4.64828 4.65482 4.69418 4.76550 4.82936 4.86331 4.90596 4.92164 4.99665 5.20555 5.25490 5.27370 5.62769 5.85304 6.25177 6.32097 6.96570 7.09764 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.073 3.927 3 C -0.151 4.151 4 O -0.384 6.384 5 C 0.070 3.930 6 H 0.105 0.895 7 C -0.166 4.166 8 C 0.141 3.859 9 H 0.116 0.884 10 N -0.677 5.677 11 C 0.552 3.448 12 N -0.579 5.579 13 C 0.176 3.824 14 C -0.253 4.253 15 C -0.054 4.054 16 O -0.565 6.565 17 Si 0.771 3.229 18 C 0.219 3.781 19 N -0.585 5.585 20 C -0.137 4.137 21 H 0.077 0.923 22 H 0.058 0.942 23 H 0.056 0.944 24 H 0.069 0.931 25 H 0.056 0.944 26 H 0.084 0.916 27 H 0.057 0.943 28 H 0.084 0.916 29 H 0.073 0.927 30 H 0.420 0.580 31 H 0.163 0.837 32 H 0.102 0.898 33 H 0.406 0.594 34 H -0.295 1.295 35 H -0.287 1.287 36 H 0.196 0.804 37 H 0.091 0.909 38 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.412 -2.892 -2.179 4.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.016 3.984 3 C -0.208 4.208 4 O -0.303 6.303 5 C 0.011 3.989 6 H 0.123 0.877 7 C -0.205 4.205 8 C 0.035 3.965 9 H 0.133 0.867 10 N -0.313 5.313 11 C 0.195 3.805 12 N -0.302 5.302 13 C 0.009 3.991 14 C -0.261 4.261 15 C -0.166 4.166 16 O -0.376 6.376 17 Si 0.677 3.323 18 C 0.051 3.949 19 N -0.307 5.307 20 C -0.175 4.175 21 H 0.095 0.905 22 H 0.077 0.923 23 H 0.075 0.925 24 H 0.087 0.913 25 H 0.075 0.925 26 H 0.102 0.898 27 H 0.076 0.924 28 H 0.102 0.898 29 H 0.092 0.908 30 H 0.259 0.741 31 H 0.180 0.820 32 H 0.120 0.880 33 H 0.257 0.743 34 H -0.222 1.222 35 H -0.215 1.215 36 H 0.212 0.788 37 H 0.109 0.891 38 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.917 -1.375 -2.724 3.186 hybrid contribution 0.334 -0.062 0.332 0.476 sum 1.251 -1.437 -2.392 3.058 Atomic orbital electron populations 1.22313 0.95305 1.02561 1.02929 1.22314 0.94160 0.94088 0.87856 1.21887 1.01492 0.94365 1.03048 1.87971 1.85997 1.19843 1.36509 1.23452 0.95447 0.81308 0.98685 0.87702 1.24010 0.97967 0.97328 1.01233 1.22240 0.89694 0.96360 0.88212 0.86660 1.44194 1.41795 1.24025 1.21300 1.19656 0.87615 0.87872 0.85363 1.67863 1.27591 1.09134 1.25592 1.22888 0.87767 0.90858 0.97569 1.21080 1.05001 1.01874 0.98126 1.24425 0.98827 0.88691 1.04611 1.86440 1.62971 1.30979 1.57182 0.94133 0.80554 0.85191 0.72390 1.23312 0.90477 0.85172 0.95967 1.68038 1.11391 1.21569 1.29704 1.23597 0.98276 0.96709 0.98931 0.90454 0.92304 0.92498 0.91305 0.92521 0.89751 0.92411 0.89767 0.90830 0.74117 0.82039 0.87976 0.74254 1.22227 1.21460 0.78756 0.89072 0.88620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.15 9.53 71.98 0.69 0.84 16 2 C 0.07 0.05 3.22 30.60 0.10 0.15 16 3 C -0.15 0.01 9.56 71.98 0.69 0.69 16 4 O -0.38 -1.59 10.00 -148.98 -1.49 -3.08 16 5 C 0.07 0.05 4.13 31.12 0.13 0.18 16 6 H 0.11 -0.23 7.77 -2.39 -0.02 -0.25 16 7 C -0.17 -0.35 7.71 31.12 0.24 -0.11 16 8 C 0.14 0.34 4.25 45.52 0.19 0.54 16 9 H 0.12 0.45 7.36 -2.39 -0.02 0.43 16 10 N -0.68 -3.56 5.50 -327.93 -1.80 -5.36 16 11 C 0.55 5.43 8.42 261.49 2.20 7.63 16 12 N -0.58 -6.01 9.13 -197.98 -1.81 -7.82 16 13 C 0.18 1.35 9.92 84.71 0.84 2.19 16 14 C -0.25 -1.17 5.40 -19.69 -0.11 -1.27 16 15 C -0.05 0.15 2.82 71.24 0.20 0.35 16 16 O -0.57 1.50 12.82 -148.98 -1.91 -0.41 16 17 Si 0.77 -3.02 29.92 68.60 2.05 -0.96 16 18 C 0.22 1.19 10.99 84.71 0.93 2.12 16 19 N -0.58 -5.59 10.46 -197.98 -2.07 -7.66 16 20 C -0.14 0.00 7.66 31.12 0.24 0.24 16 21 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 22 H 0.06 -0.07 8.14 -2.38 -0.02 -0.09 16 23 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 24 H 0.07 -0.08 7.72 -2.39 -0.02 -0.10 16 25 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 26 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 27 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 28 H 0.08 0.36 8.14 -2.39 -0.02 0.34 16 29 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 30 H 0.42 1.27 8.84 -92.71 -0.82 0.45 16 31 H 0.16 0.83 5.04 -2.91 -0.01 0.82 16 32 H 0.10 -0.79 7.96 -2.39 -0.02 -0.81 16 33 H 0.41 -5.39 8.74 -74.06 -0.65 -6.03 16 34 H -0.29 -1.06 7.06 99.48 0.70 -0.36 16 35 H -0.29 -0.50 7.11 99.48 0.71 0.20 16 36 H 0.20 -0.10 8.06 -2.91 -0.02 -0.12 16 37 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 38 H 0.10 0.05 8.12 -2.39 -0.02 0.03 16 Total: 0.00 -16.62 318.51 -1.05 -17.67 By element: Atomic # 1 Polarization: -5.57 SS G_CDS: -0.36 Total: -5.93 kcal Atomic # 6 Polarization: 7.21 SS G_CDS: 6.34 Total: 13.55 kcal Atomic # 7 Polarization: -15.15 SS G_CDS: -5.68 Total: -20.84 kcal Atomic # 8 Polarization: -0.09 SS G_CDS: -3.40 Total: -3.49 kcal Atomic # 14 Polarization: -3.02 SS G_CDS: 2.05 Total: -0.96 kcal Total: -16.62 -1.05 -17.67 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10905400_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.843 kcal (2) G-P(sol) polarization free energy of solvation -16.623 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.220 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.675 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds