Wall clock time and date at job start Mon Mar 8 2021 06:21:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53005 * 109.47304 * 2 1 4 4 O 1.42899 * 109.46778 * 119.99707 * 2 1 3 5 5 C 1.42902 * 113.99903 * 90.00295 * 4 2 1 6 6 H 1.08993 * 112.90736 * 341.24804 * 5 4 2 7 7 C 1.53962 * 113.66723 * 112.55150 * 5 4 2 8 8 C 1.53782 * 87.11063 * 139.88843 * 7 5 4 9 9 H 1.08997 * 113.61225 * 89.18406 * 8 7 5 10 10 N 1.46506 * 113.68817 * 220.07794 * 8 7 5 11 11 C 1.39147 * 119.99558 * 252.53363 * 10 8 7 12 12 N 1.32333 * 119.72222 * 0.02562 * 11 10 8 13 13 C 1.32004 * 121.64962 * 179.97438 * 12 11 10 14 14 C 1.37985 * 120.89879 * 359.97438 * 13 12 11 15 15 C 1.50700 * 120.32674 * 179.97438 * 14 13 12 16 16 O 1.42903 * 109.46691 * 244.99967 * 15 14 13 17 17 Si 1.86302 * 109.47130 * 4.99438 * 15 14 13 18 18 C 1.38902 * 119.34540 * 359.97438 * 14 13 12 19 19 C 1.38445 * 118.48724 * 359.74871 * 18 14 13 20 20 F 1.35103 * 120.47177 * 180.26322 * 19 18 14 21 21 C 1.53781 * 87.08260 * 334.63747 * 8 7 5 22 22 H 1.08994 * 109.47675 * 300.00297 * 1 2 3 23 23 H 1.09005 * 109.46688 * 60.00339 * 1 2 3 24 24 H 1.09000 * 109.47291 * 179.97438 * 1 2 3 25 25 H 1.08994 * 109.47675 * 239.99703 * 2 1 3 26 26 H 1.08994 * 109.47266 * 179.97438 * 3 2 1 27 27 H 1.08991 * 109.47046 * 299.99671 * 3 2 1 28 28 H 1.09004 * 109.46961 * 59.99389 * 3 2 1 29 29 H 1.08997 * 113.53543 * 25.33518 * 7 5 4 30 30 H 1.08994 * 113.66446 * 254.45720 * 7 5 4 31 31 H 0.96990 * 119.99883 * 72.53908 * 10 8 7 32 32 H 1.07998 * 119.55240 * 180.02562 * 13 12 11 33 33 H 1.08992 * 109.47383 * 124.99987 * 15 14 13 34 34 H 0.96703 * 114.00030 * 180.02562 * 16 15 14 35 35 H 1.48493 * 109.99902 * 178.68036 * 17 15 14 36 36 H 1.48498 * 110.00037 * 300.00283 * 17 15 14 37 37 H 1.08010 * 120.75832 * 179.97438 * 18 14 13 38 38 H 1.09002 * 113.61445 * 139.98212 * 21 8 7 39 39 H 1.09002 * 113.61408 * 270.79943 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 2.0062 -0.6736 1.1668 5 6 2.2000 -2.0782 0.9887 6 1 1.6638 -2.4744 0.1265 7 6 3.6763 -2.5110 1.0492 8 6 3.2026 -3.7399 1.8431 9 1 2.9410 -4.5913 1.2148 10 7 4.0893 -4.1020 2.9517 11 6 4.8916 -5.2352 2.8593 12 7 4.8495 -5.9815 1.7672 13 6 5.5943 -7.0638 1.6388 14 6 6.4504 -7.4584 2.6465 15 6 7.2943 -8.6967 2.4865 16 8 6.8920 -9.6747 3.4476 17 14 7.0693 -9.3840 0.7696 18 6 6.5266 -6.7032 3.8098 19 6 5.7381 -5.5700 3.9141 20 9 5.7844 -4.8031 5.0255 21 6 1.9908 -2.8967 2.2737 22 1 -0.3634 0.5138 0.8899 23 1 -0.3633 0.5138 -0.8901 24 1 -0.3634 -1.0276 -0.0005 25 1 1.8934 -0.5138 -0.8899 26 1 3.1300 1.4425 0.0005 27 1 1.6768 1.9563 -0.8899 28 1 1.6766 1.9564 0.8900 29 1 4.3051 -1.8336 1.6270 30 1 4.1003 -2.7570 0.0757 31 1 4.1171 -3.5519 3.7501 32 1 5.5333 -7.6478 0.7325 33 1 8.3431 -8.4442 2.6422 34 1 7.3942 -10.4999 3.4029 35 1 7.9207 -10.5871 0.5885 36 1 5.6434 -9.7322 0.5447 37 1 7.1886 -6.9914 4.6131 38 1 1.0542 -3.4541 2.2887 39 1 2.1584 -2.3260 3.1871 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10905400_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:29 Heat of formation + Delta-G solvation = -52.745610 kcal Electronic energy + Delta-G solvation = -22013.581743 eV Core-core repulsion = 18452.448345 eV Total energy + Delta-G solvation = -3561.133398 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -49.80462 -41.42705 -40.52084 -38.39969 -37.79450 -35.38088 -33.28790 -32.94935 -31.15821 -28.19075 -26.86884 -26.66759 -25.57285 -23.96924 -22.71980 -22.22311 -20.97938 -19.14991 -18.76994 -18.52704 -17.96738 -17.69157 -16.81341 -16.72186 -16.28774 -15.98420 -15.74406 -15.66886 -15.07160 -14.99239 -14.74538 -14.21017 -14.17513 -13.98354 -13.81946 -13.62420 -13.49779 -13.24849 -13.14728 -12.78468 -12.54741 -12.29591 -12.05809 -11.95370 -11.89012 -11.59564 -11.15564 -10.67643 -10.63362 -10.45423 -10.38578 -8.70236 -5.02493 -0.00488 0.18050 1.20556 1.53449 1.89546 1.96879 2.55986 2.75528 3.11713 3.23162 3.39021 3.48163 3.53965 3.65435 3.83387 3.85746 3.90041 3.98104 4.09821 4.11423 4.24401 4.26153 4.35788 4.52566 4.66530 4.68069 4.73630 4.75021 4.78636 4.85027 4.89176 4.96513 4.98814 5.04279 5.13517 5.24499 5.27132 5.47977 6.00617 6.22982 6.36155 6.38623 7.00466 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.079 3.921 3 C -0.151 4.151 4 O -0.366 6.366 5 C 0.067 3.933 6 H 0.091 0.909 7 C -0.169 4.169 8 C 0.138 3.862 9 H 0.122 0.878 10 N -0.703 5.703 11 C 0.391 3.609 12 N -0.512 5.512 13 C 0.150 3.850 14 C -0.163 4.163 15 C -0.063 4.063 16 O -0.537 6.537 17 Si 0.680 3.320 18 C -0.037 4.037 19 C -0.020 4.020 20 F -0.133 7.133 21 C -0.147 4.147 22 H 0.064 0.936 23 H 0.065 0.935 24 H 0.056 0.944 25 H 0.061 0.939 26 H 0.061 0.939 27 H 0.070 0.930 28 H 0.063 0.937 29 H 0.092 0.908 30 H 0.076 0.924 31 H 0.413 0.587 32 H 0.164 0.836 33 H 0.078 0.922 34 H 0.381 0.619 35 H -0.258 1.258 36 H -0.251 1.251 37 H 0.148 0.852 38 H 0.080 0.920 39 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.287 0.296 -3.521 3.760 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.022 3.978 3 C -0.208 4.208 4 O -0.285 6.285 5 C 0.008 3.992 6 H 0.109 0.891 7 C -0.208 4.208 8 C 0.032 3.968 9 H 0.140 0.860 10 N -0.335 5.335 11 C 0.153 3.847 12 N -0.229 5.229 13 C -0.007 4.007 14 C -0.168 4.168 15 C -0.173 4.173 16 O -0.345 6.345 17 Si 0.581 3.419 18 C -0.063 4.063 19 C -0.047 4.047 20 F -0.112 7.112 21 C -0.185 4.185 22 H 0.083 0.917 23 H 0.084 0.916 24 H 0.075 0.925 25 H 0.079 0.921 26 H 0.080 0.920 27 H 0.088 0.912 28 H 0.083 0.917 29 H 0.110 0.890 30 H 0.094 0.906 31 H 0.251 0.749 32 H 0.180 0.820 33 H 0.096 0.904 34 H 0.229 0.771 35 H -0.183 1.183 36 H -0.176 1.176 37 H 0.166 0.834 38 H 0.099 0.901 39 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.037 0.504 -4.451 4.480 hybrid contribution 0.760 -0.874 1.924 2.246 sum 0.723 -0.370 -2.528 2.655 Atomic orbital electron populations 1.22334 0.95875 1.02387 1.02784 1.22165 0.93659 0.93955 0.88031 1.21872 1.01849 0.94431 1.02682 1.87991 1.85805 1.19165 1.35531 1.23435 0.96009 0.81691 0.98045 0.89075 1.24090 0.97462 0.97678 1.01596 1.22191 0.89451 0.96502 0.88635 0.86000 1.44516 1.43104 1.25181 1.20722 1.18450 0.88953 0.88447 0.88867 1.67293 1.25672 1.07673 1.22213 1.22319 0.89212 0.91511 0.97665 1.19806 1.02784 0.98223 0.95968 1.24568 0.99216 0.89570 1.03970 1.86600 1.63959 1.27856 1.56046 0.95142 0.81809 0.85761 0.79169 1.21260 0.96235 0.90944 0.97865 1.17968 1.05006 0.95715 0.85971 1.91492 1.95786 1.74100 1.49855 1.23658 0.98607 0.97203 0.99052 0.91710 0.91559 0.92492 0.92083 0.91960 0.91151 0.91748 0.88956 0.90573 0.74891 0.81988 0.90410 0.77097 1.18281 1.17554 0.83439 0.90113 0.88657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.09 9.53 37.16 0.35 0.45 16 2 C 0.08 0.00 3.22 -26.73 -0.09 -0.08 16 3 C -0.15 0.06 9.56 37.16 0.36 0.41 16 4 O -0.37 -0.58 10.00 -35.23 -0.35 -0.94 16 5 C 0.07 -0.01 4.14 -25.82 -0.11 -0.12 16 6 H 0.09 -0.13 7.77 -51.93 -0.40 -0.53 16 7 C -0.17 0.02 7.72 -25.82 -0.20 -0.18 16 8 C 0.14 -0.01 4.27 -67.11 -0.29 -0.30 16 9 H 0.12 0.04 7.41 -51.93 -0.38 -0.34 16 10 N -0.70 -0.60 5.51 -53.06 -0.29 -0.89 16 11 C 0.39 0.93 7.49 -154.86 -1.16 -0.23 16 12 N -0.51 -1.21 9.13 -12.37 -0.11 -1.33 16 13 C 0.15 0.16 9.84 -17.57 -0.17 -0.02 16 14 C -0.16 -0.16 5.39 -104.47 -0.56 -0.72 16 15 C -0.06 0.05 2.81 36.01 0.10 0.15 16 16 O -0.54 -0.29 12.82 -35.23 -0.45 -0.75 16 17 Si 0.68 -1.21 29.88 -169.99 -5.08 -6.29 16 18 C -0.04 -0.06 9.82 -39.26 -0.39 -0.45 16 19 C -0.02 -0.05 7.35 -39.09 -0.29 -0.34 16 20 F -0.13 -0.39 16.65 2.25 0.04 -0.36 16 21 C -0.15 0.08 7.66 -25.92 -0.20 -0.11 16 22 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 23 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 24 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.06 -0.05 7.72 -51.93 -0.40 -0.45 16 26 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.09 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.41 -0.01 8.20 -40.82 -0.33 -0.34 16 32 H 0.16 -0.19 4.87 -52.49 -0.26 -0.45 16 33 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 34 H 0.38 -1.31 8.74 45.56 0.40 -0.91 16 35 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 36 H -0.25 -0.29 7.05 56.52 0.40 0.11 16 37 H 0.15 0.06 8.06 -52.48 -0.42 -0.36 16 38 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.09 -0.02 8.12 -51.93 -0.42 -0.44 16 LS Contribution 329.05 15.07 4.96 4.96 Total: 0.00 -5.60 329.05 -9.57 -15.17 By element: Atomic # 1 Polarization: -2.40 SS G_CDS: -5.64 Total: -8.05 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -2.64 Total: -1.53 kcal Atomic # 7 Polarization: -1.81 SS G_CDS: -0.41 Total: -2.22 kcal Atomic # 8 Polarization: -0.88 SS G_CDS: -0.80 Total: -1.68 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.36 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.08 Total: -6.29 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -5.60 -9.57 -15.17 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10905400_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.579 kcal (2) G-P(sol) polarization free energy of solvation -5.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.746 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds