Wall clock time and date at job start Mon Mar 8 2021 06:21:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42903 * 109.46726 * 2 1 4 4 C 1.42899 * 113.99629 * 180.02562 * 3 2 1 5 5 H 1.08996 * 112.85093 * 341.19599 * 4 3 2 6 6 C 1.53777 * 113.61571 * 112.50341 * 4 3 2 7 7 C 1.53787 * 87.08387 * 139.97997 * 6 4 3 8 8 H 1.08998 * 113.68942 * 89.13078 * 7 6 4 9 9 N 1.46500 * 113.61300 * 220.02493 * 7 6 4 10 10 C 1.38410 * 119.99493 * 252.49216 * 9 7 6 11 11 N 1.32497 * 119.21881 * 359.73193 * 10 9 7 12 12 C 1.32277 * 120.74073 * 179.71543 * 11 10 9 13 13 C 1.38603 * 119.19573 * 0.54462 * 12 11 10 14 14 C 1.50693 * 120.72124 * 179.70388 * 13 12 11 15 15 O 1.42906 * 109.47352 * 120.02624 * 14 13 12 16 16 Si 1.86299 * 109.47306 * 0.02954 * 14 13 12 17 17 C 1.38611 * 118.55961 * 359.73282 * 13 12 11 18 18 N 1.32271 * 119.19419 * 359.97438 * 17 13 12 19 19 C 1.53784 * 87.07722 * 334.56664 * 7 6 4 20 20 H 1.09001 * 109.47194 * 299.99575 * 1 2 3 21 21 H 1.08992 * 109.47399 * 59.99748 * 1 2 3 22 22 H 1.09004 * 109.46724 * 180.02562 * 1 2 3 23 23 H 1.09002 * 109.47398 * 120.00244 * 2 1 3 24 24 H 1.09001 * 109.47194 * 240.00425 * 2 1 3 25 25 H 1.08998 * 113.61615 * 254.52934 * 6 4 3 26 26 H 1.09003 * 113.61525 * 25.43608 * 6 4 3 27 27 H 0.96994 * 120.00421 * 72.49272 * 9 7 6 28 28 H 1.07996 * 120.39901 * 180.25478 * 12 11 10 29 29 H 1.09004 * 109.47735 * 240.02681 * 14 13 12 30 30 H 0.96703 * 113.99912 * 300.00526 * 15 14 13 31 31 H 1.48499 * 110.00288 * 179.97438 * 16 14 13 32 32 H 1.48497 * 109.99975 * 301.31885 * 16 14 13 33 33 H 1.08001 * 120.40011 * 179.97438 * 17 13 12 34 34 H 1.08998 * 113.61974 * 270.88254 * 19 7 6 35 35 H 1.09009 * 113.68395 * 139.98989 * 19 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.4308 1.4602 -0.0006 5 1 3.9279 0.5457 0.3228 6 6 4.0018 2.0466 -1.3024 7 6 4.9896 2.8316 -0.4232 8 1 5.9144 2.2934 -0.2158 9 7 5.2203 4.2039 -0.8812 10 6 6.4246 4.5424 -1.4736 11 7 7.3598 3.6144 -1.6139 12 6 8.5195 3.9034 -2.1807 13 6 8.7537 5.1971 -2.6195 14 6 10.0650 5.5658 -3.2640 15 8 9.8269 6.0406 -4.5907 16 14 11.1680 4.0659 -3.3301 17 6 7.7559 6.1445 -2.4521 18 7 6.6166 5.7879 -1.8825 19 6 3.9488 2.7252 0.7039 20 1 -0.3634 0.5138 0.8900 21 1 -0.3634 0.5138 -0.8899 22 1 -0.3633 -1.0277 0.0005 23 1 1.8934 -0.5139 0.8900 24 1 1.8934 -0.5138 -0.8900 25 1 4.4805 1.3053 -1.9422 26 1 3.2978 2.6808 -1.8413 27 1 4.5292 4.8752 -0.7693 28 1 9.2763 3.1416 -2.2960 29 1 10.5499 6.3479 -2.6798 30 1 9.3966 5.3952 -5.1682 31 1 12.4643 4.4161 -3.9642 32 1 11.3975 3.5434 -1.9591 33 1 7.9069 7.1615 -2.7827 34 1 3.2303 3.5448 0.7136 35 1 4.3836 2.5318 1.6846 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10905470_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:32 Heat of formation + Delta-G solvation = 11.209001 kcal Electronic energy + Delta-G solvation = -18069.792899 eV Core-core repulsion = 15070.998465 eV Total energy + Delta-G solvation = -2998.794434 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 252.126 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -42.08875 -40.59548 -38.26189 -37.65167 -35.23007 -34.65183 -32.26631 -31.55353 -26.99167 -26.78990 -25.93071 -24.66815 -23.73372 -22.98802 -21.03026 -19.34947 -18.92173 -18.08948 -17.74312 -16.72868 -16.64099 -16.45809 -16.10021 -15.82984 -15.63329 -15.47171 -14.68076 -14.43579 -14.12948 -14.04687 -13.54643 -13.53255 -13.16935 -12.98118 -12.49357 -12.20233 -12.17539 -11.97673 -11.89209 -11.79478 -11.73509 -11.22134 -10.58743 -10.42870 -9.99581 -9.07716 -5.11681 0.07878 0.17795 1.22220 1.54785 1.78901 1.91473 2.73695 2.82672 3.16402 3.39979 3.41407 3.50173 3.62966 3.71793 3.78460 3.80095 3.82133 4.11748 4.19211 4.23552 4.34922 4.41503 4.48944 4.62277 4.69187 4.73301 4.76601 4.89469 4.92138 4.97406 5.03552 5.19708 5.32859 5.80558 6.01920 6.26552 6.43252 6.51194 7.30948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.373 6.373 4 C 0.067 3.933 5 H 0.092 0.908 6 C -0.169 4.169 7 C 0.141 3.859 8 H 0.123 0.877 9 N -0.682 5.682 10 C 0.568 3.432 11 N -0.563 5.563 12 C 0.199 3.801 13 C -0.295 4.295 14 C -0.046 4.046 15 O -0.541 6.541 16 Si 0.682 3.318 17 C 0.224 3.776 18 N -0.569 5.569 19 C -0.146 4.146 20 H 0.063 0.937 21 H 0.063 0.937 22 H 0.072 0.928 23 H 0.050 0.950 24 H 0.049 0.951 25 H 0.076 0.924 26 H 0.093 0.907 27 H 0.416 0.584 28 H 0.166 0.834 29 H 0.116 0.884 30 H 0.379 0.621 31 H -0.251 1.251 32 H -0.255 1.255 33 H 0.171 0.829 34 H 0.097 0.903 35 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.333 -3.775 -0.509 3.824 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.021 4.021 3 O -0.292 6.292 4 C 0.008 3.992 5 H 0.110 0.890 6 C -0.208 4.208 7 C 0.035 3.965 8 H 0.141 0.859 9 N -0.317 5.317 10 C 0.212 3.788 11 N -0.285 5.285 12 C 0.031 3.969 13 C -0.304 4.304 14 C -0.158 4.158 15 O -0.346 6.346 16 Si 0.584 3.416 17 C 0.055 3.945 18 N -0.291 5.291 19 C -0.184 4.184 20 H 0.082 0.918 21 H 0.082 0.918 22 H 0.090 0.910 23 H 0.068 0.932 24 H 0.068 0.932 25 H 0.095 0.905 26 H 0.112 0.888 27 H 0.254 0.746 28 H 0.183 0.817 29 H 0.133 0.867 30 H 0.226 0.774 31 H -0.175 1.175 32 H -0.180 1.180 33 H 0.188 0.812 34 H 0.115 0.885 35 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.348 -3.883 0.506 3.931 hybrid contribution 0.462 0.783 -0.036 0.910 sum 0.114 -3.099 0.470 3.137 Atomic orbital electron populations 1.21760 0.93594 1.02479 1.03222 1.22549 0.95783 0.83625 1.00152 1.87959 1.20046 1.26651 1.94553 1.23362 0.81695 0.97675 0.96467 0.88964 1.24060 0.98646 1.00286 0.97818 1.22240 0.98123 0.81673 0.94511 0.85884 1.44139 1.13019 1.11847 1.62682 1.19426 0.87033 0.84993 0.87375 1.67890 1.02710 1.35947 1.21936 1.22783 0.92330 0.94041 0.87750 1.21709 1.00984 0.96774 1.10906 1.24701 0.97508 1.08650 0.84972 1.86508 1.83030 1.44525 1.20527 0.94951 0.80804 0.81551 0.84328 1.22839 0.85604 0.99571 0.86448 1.67998 1.25065 1.17823 1.18199 1.23666 0.97653 0.98626 0.98480 0.91796 0.91795 0.90954 0.93218 0.93230 0.90530 0.88818 0.74583 0.81718 0.86710 0.77351 1.17532 1.18013 0.81240 0.88484 0.89947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.11 10.28 37.16 0.38 0.49 16 2 C 0.06 -0.02 6.50 37.16 0.24 0.23 16 3 O -0.37 -0.56 10.35 -35.23 -0.36 -0.92 16 4 C 0.07 -0.03 4.31 -25.92 -0.11 -0.15 16 5 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 6 C -0.17 0.06 7.71 -25.92 -0.20 -0.14 16 7 C 0.14 -0.06 4.25 -67.11 -0.29 -0.34 16 8 H 0.12 0.00 7.36 -51.93 -0.38 -0.39 16 9 N -0.68 -0.59 5.50 -55.00 -0.30 -0.89 16 10 C 0.57 1.53 8.43 -322.80 -2.72 -1.19 16 11 N -0.56 -1.24 9.13 -13.93 -0.13 -1.36 16 12 C 0.20 0.05 9.92 -17.23 -0.17 -0.12 16 13 C -0.30 0.02 5.40 -104.35 -0.56 -0.55 16 14 C -0.05 0.05 2.85 36.00 0.10 0.16 16 15 O -0.54 0.40 12.79 -35.23 -0.45 -0.05 16 16 Si 0.68 -1.36 29.87 -169.99 -5.08 -6.44 16 17 C 0.22 0.27 10.92 -17.22 -0.19 0.08 16 18 N -0.57 -1.72 10.46 -13.93 -0.15 -1.86 16 19 C -0.15 0.15 7.66 -25.92 -0.20 -0.05 16 20 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 21 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 22 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 23 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.09 0.06 8.14 -51.93 -0.42 -0.36 16 27 H 0.42 0.01 8.84 -40.82 -0.36 -0.36 16 28 H 0.17 -0.38 5.04 -52.49 -0.26 -0.65 16 29 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 30 H 0.38 -1.64 8.70 45.56 0.40 -1.25 16 31 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 32 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 33 H 0.17 -0.08 8.06 -52.49 -0.42 -0.51 16 34 H 0.10 -0.06 8.12 -51.93 -0.42 -0.48 16 35 H 0.08 -0.13 8.14 -51.92 -0.42 -0.56 16 LS Contribution 297.63 15.07 4.49 4.49 Total: 0.00 -6.17 297.63 -10.55 -16.72 By element: Atomic # 1 Polarization: -3.24 SS G_CDS: -4.86 Total: -8.10 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -3.71 Total: -1.58 kcal Atomic # 7 Polarization: -3.54 SS G_CDS: -0.58 Total: -4.12 kcal Atomic # 8 Polarization: -0.16 SS G_CDS: -0.82 Total: -0.97 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.08 Total: -6.44 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -6.17 -10.55 -16.72 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10905470_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.927 kcal (2) G-P(sol) polarization free energy of solvation -6.166 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.761 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.718 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.209 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds