Wall clock time and date at job start Mon Mar 8 2021 06:21:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.42897 * 109.46964 * 2 1 4 4 C 1.42900 * 113.99967 * 180.02562 * 3 2 1 5 5 H 1.09003 * 112.91065 * 18.74792 * 4 3 2 6 6 C 1.53787 * 113.61833 * 149.99850 * 4 3 2 7 7 C 1.53781 * 87.07987 * 139.98032 * 6 4 3 8 8 H 1.09002 * 113.61228 * 89.11929 * 7 6 4 9 9 N 1.46500 * 113.61339 * 219.93875 * 7 6 4 10 10 C 1.39006 * 119.99974 * 203.47637 * 9 7 6 11 11 N 1.32396 * 119.70478 * 179.72718 * 10 9 7 12 12 C 1.31973 * 121.61931 * 179.71040 * 11 10 9 13 13 C 1.38029 * 120.85762 * 0.55892 * 12 11 10 14 14 C 1.50699 * 120.33540 * 179.74810 * 13 12 11 15 15 O 1.42902 * 109.46758 * 244.98122 * 14 13 12 16 16 Si 1.86297 * 109.47249 * 4.98041 * 14 13 12 17 17 C 1.38879 * 119.32551 * 359.72891 * 13 12 11 18 18 C 1.38300 * 118.51164 * 0.02562 * 17 13 12 19 19 C 1.53779 * 113.61316 * 247.49845 * 4 3 2 20 20 H 1.08995 * 109.46874 * 300.00149 * 1 2 3 21 21 H 1.09005 * 109.47203 * 59.99809 * 1 2 3 22 22 H 1.09000 * 109.47135 * 179.97438 * 1 2 3 23 23 H 1.09003 * 109.46735 * 240.00473 * 2 1 3 24 24 H 1.08988 * 109.47053 * 120.00014 * 2 1 3 25 25 H 1.09005 * 113.61051 * 25.43436 * 6 4 3 26 26 H 1.08996 * 113.69311 * 254.54065 * 6 4 3 27 27 H 0.96998 * 120.00149 * 23.46564 * 9 7 6 28 28 H 1.08005 * 119.57163 * 180.28786 * 12 11 10 29 29 H 1.08992 * 109.46991 * 124.98135 * 14 13 12 30 30 H 0.96696 * 114.00435 * 60.00326 * 15 14 13 31 31 H 1.48499 * 110.00337 * 58.67814 * 16 14 13 32 32 H 1.48493 * 110.00300 * 180.02562 * 16 14 13 33 33 H 1.08004 * 120.74716 * 179.97438 * 17 13 12 34 34 H 1.08000 * 120.45355 * 179.97438 * 18 17 13 35 35 H 1.09003 * 113.61775 * 105.47426 * 19 4 3 36 36 H 1.08996 * 113.61960 * 334.56152 * 19 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.4309 1.4601 -0.0006 5 1 3.9288 0.5459 -0.3236 6 6 3.9484 2.7253 -0.7052 7 6 4.9900 2.8313 0.4212 8 1 5.9141 2.2919 0.2134 9 7 5.2226 4.2036 0.8781 10 6 6.4205 4.5353 1.5006 11 7 6.6267 5.7785 1.9064 12 6 7.7473 6.1336 2.5064 13 6 8.7556 5.2163 2.7233 14 6 10.0326 5.6359 3.4046 15 8 11.1228 5.5158 2.4885 16 14 9.8847 7.4063 3.9652 17 6 8.5811 3.9027 2.3076 18 6 7.3944 3.5590 1.6862 19 6 4.0029 2.0461 1.3010 20 1 -0.3633 0.5138 0.8899 21 1 -0.3634 0.5139 -0.8900 22 1 -0.3633 -1.0277 -0.0005 23 1 1.8933 -0.5138 -0.8901 24 1 1.8933 -0.5138 0.8899 25 1 3.2299 3.5450 -0.7140 26 1 4.3837 2.5335 -1.6858 27 1 4.5409 4.8809 0.7461 28 1 7.8787 7.1562 2.8281 29 1 10.2113 4.9951 4.2680 30 1 11.0311 6.0598 1.6944 31 1 8.7347 7.5508 4.8935 32 1 11.1380 7.8325 4.6381 33 1 9.3552 3.1662 2.4653 34 1 7.2257 2.5467 1.3500 35 1 4.4823 1.3046 1.9401 36 1 3.2994 2.6802 1.8407 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10905470_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:36 Heat of formation + Delta-G solvation = -5.648962 kcal Electronic energy + Delta-G solvation = -17916.469323 eV Core-core repulsion = 14982.369784 eV Total energy + Delta-G solvation = -2934.099540 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.131 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.52233 -40.52585 -38.20358 -37.54729 -35.06234 -33.34734 -31.95893 -31.04621 -26.91626 -26.71027 -25.06789 -24.49209 -23.75694 -22.44107 -20.94068 -18.94009 -18.44419 -18.14215 -17.21219 -16.70945 -16.61963 -16.43399 -16.04268 -15.83287 -15.31772 -15.02788 -14.56867 -14.23814 -14.08700 -14.01890 -13.60359 -13.58463 -13.35604 -12.94957 -12.58035 -12.31190 -12.24638 -12.01284 -11.96067 -11.86875 -11.10353 -10.71679 -10.48001 -10.38249 -10.36286 -8.69515 -5.01500 0.25696 0.43963 1.32847 1.65827 1.99578 2.00739 2.74492 2.85076 3.31993 3.42184 3.49867 3.56858 3.68900 3.72213 3.79757 3.99044 4.03177 4.08329 4.14457 4.25513 4.33843 4.37802 4.51945 4.55945 4.63386 4.70933 4.74577 4.81895 4.85356 4.93596 4.98445 5.03841 5.17817 5.33052 5.53440 6.00108 6.21740 6.53771 6.60877 7.17084 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.055 3.945 3 O -0.372 6.372 4 C 0.066 3.934 5 H 0.092 0.908 6 C -0.142 4.142 7 C 0.132 3.868 8 H 0.113 0.887 9 N -0.708 5.708 10 C 0.409 3.591 11 N -0.540 5.540 12 C 0.158 3.842 13 C -0.237 4.237 14 C -0.052 4.052 15 O -0.543 6.543 16 Si 0.680 3.320 17 C -0.005 4.005 18 C -0.240 4.240 19 C -0.172 4.172 20 H 0.063 0.937 21 H 0.063 0.937 22 H 0.072 0.928 23 H 0.050 0.950 24 H 0.049 0.951 25 H 0.098 0.902 26 H 0.083 0.917 27 H 0.408 0.592 28 H 0.155 0.845 29 H 0.111 0.889 30 H 0.378 0.622 31 H -0.256 1.256 32 H -0.253 1.253 33 H 0.135 0.865 34 H 0.133 0.867 35 H 0.074 0.926 36 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.742 -2.125 -2.647 3.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.021 4.021 3 O -0.291 6.291 4 C 0.007 3.993 5 H 0.110 0.890 6 C -0.181 4.181 7 C 0.026 3.974 8 H 0.130 0.870 9 N -0.340 5.340 10 C 0.173 3.827 11 N -0.256 5.256 12 C 0.000 4.000 13 C -0.242 4.242 14 C -0.164 4.164 15 O -0.348 6.348 16 Si 0.582 3.418 17 C -0.031 4.031 18 C -0.264 4.264 19 C -0.211 4.211 20 H 0.082 0.918 21 H 0.082 0.918 22 H 0.091 0.909 23 H 0.068 0.932 24 H 0.067 0.933 25 H 0.117 0.883 26 H 0.101 0.899 27 H 0.244 0.756 28 H 0.172 0.828 29 H 0.129 0.871 30 H 0.226 0.774 31 H -0.181 1.181 32 H -0.178 1.178 33 H 0.153 0.847 34 H 0.151 0.849 35 H 0.093 0.907 36 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -1.317 -1.400 -1.709 2.572 hybrid contribution 0.388 -1.279 0.258 1.361 sum -0.929 -2.679 -1.451 3.185 Atomic orbital electron populations 1.21763 0.93544 1.02510 1.03256 1.22552 0.95846 0.83586 1.00131 1.87966 1.19951 1.26672 1.94534 1.23380 0.81847 0.97674 0.96404 0.89022 1.23614 0.97531 0.98622 0.98284 1.22225 0.97617 0.82418 0.95187 0.86974 1.44448 1.15887 1.10657 1.62990 1.18425 0.86500 0.88971 0.88769 1.67144 1.24138 1.17462 1.16892 1.22192 0.87462 0.98412 0.91896 1.20986 0.98930 0.95735 1.08541 1.24777 0.84968 1.11690 0.94949 1.86491 1.42515 1.70995 1.34792 0.94893 0.80556 0.79207 0.87137 1.21190 0.95414 0.95318 0.91163 1.21470 0.95517 1.00471 1.08985 1.24116 0.98933 1.00246 0.97826 0.91785 0.91755 0.90929 0.93196 0.93262 0.88335 0.89874 0.75561 0.82831 0.87123 0.77437 1.18075 1.17817 0.84700 0.84919 0.90687 0.88546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.13 10.28 37.16 0.38 0.52 16 2 C 0.06 -0.03 6.50 37.16 0.24 0.21 16 3 O -0.37 -0.43 10.35 -35.23 -0.36 -0.79 16 4 C 0.07 -0.08 4.31 -25.92 -0.11 -0.19 16 5 H 0.09 -0.25 7.87 -51.93 -0.41 -0.66 16 6 C -0.14 0.25 7.66 -25.92 -0.20 0.05 16 7 C 0.13 -0.22 3.99 -67.12 -0.27 -0.49 16 8 H 0.11 -0.31 6.17 -51.93 -0.32 -0.63 16 9 N -0.71 -0.06 5.54 -53.14 -0.29 -0.35 16 10 C 0.41 0.76 7.65 -155.02 -1.19 -0.42 16 11 N -0.54 -1.59 10.39 -12.43 -0.13 -1.72 16 12 C 0.16 0.21 9.84 -17.57 -0.17 0.04 16 13 C -0.24 -0.18 5.36 -104.46 -0.56 -0.74 16 14 C -0.05 0.00 2.82 36.00 0.10 0.10 16 15 O -0.54 -0.20 12.84 -35.23 -0.45 -0.65 16 16 Si 0.68 -0.51 29.83 -169.99 -5.07 -5.59 16 17 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 18 C -0.24 -0.17 9.28 -39.22 -0.36 -0.54 16 19 C -0.17 0.19 7.71 -25.92 -0.20 -0.01 16 20 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 21 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 22 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 23 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 24 H 0.05 -0.06 8.14 -51.94 -0.42 -0.48 16 25 H 0.10 -0.10 8.11 -51.93 -0.42 -0.52 16 26 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 27 H 0.41 -0.05 8.84 -40.82 -0.36 -0.41 16 28 H 0.16 -0.13 4.91 -52.48 -0.26 -0.39 16 29 H 0.11 0.04 7.96 -51.93 -0.41 -0.38 16 30 H 0.38 -1.26 8.70 45.56 0.40 -0.87 16 31 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 32 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 33 H 0.14 -0.06 8.06 -52.48 -0.42 -0.48 16 34 H 0.13 -0.16 6.06 -52.49 -0.32 -0.48 16 35 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 300.21 15.07 4.52 4.52 Total: 0.00 -5.89 300.21 -9.62 -15.51 By element: Atomic # 1 Polarization: -3.97 SS G_CDS: -5.11 Total: -9.07 kcal Atomic # 6 Polarization: 0.86 SS G_CDS: -2.72 Total: -1.86 kcal Atomic # 7 Polarization: -1.65 SS G_CDS: -0.42 Total: -2.07 kcal Atomic # 8 Polarization: -0.63 SS G_CDS: -0.82 Total: -1.44 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.07 Total: -5.59 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -5.89 -9.62 -15.51 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10905470_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.858 kcal (2) G-P(sol) polarization free energy of solvation -5.891 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.649 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds