Wall clock time and date at job start Mon Mar 8 2021 06:21:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42903 * 109.47055 * 2 1 4 4 C 1.42900 * 114.00352 * 180.02562 * 3 2 1 5 5 H 1.09001 * 112.90631 * 341.24856 * 4 3 2 6 6 C 1.53778 * 113.61638 * 112.50378 * 4 3 2 7 7 C 1.53779 * 87.08140 * 139.98187 * 6 4 3 8 8 H 1.09000 * 113.69088 * 89.12571 * 7 6 4 9 9 N 1.46501 * 113.61359 * 220.01674 * 7 6 4 10 10 C 1.38609 * 120.00319 * 252.49750 * 9 7 6 11 11 N 1.29689 * 124.94704 * 359.95720 * 10 9 7 12 12 C 1.32119 * 116.86486 * 180.02562 * 11 10 9 13 13 C 1.33320 * 114.58192 * 359.97438 * 12 11 10 14 14 C 1.50698 * 125.95578 * 180.02562 * 13 12 11 15 15 O 1.42900 * 109.46795 * 299.97920 * 14 13 12 16 16 Si 1.86292 * 109.47554 * 179.97438 * 14 13 12 17 17 S 1.70961 * 124.95151 * 180.02562 * 10 9 7 18 18 C 1.53778 * 87.08270 * 334.56664 * 7 6 4 19 19 H 1.09010 * 109.46788 * 180.02562 * 1 2 3 20 20 H 1.08995 * 109.47265 * 299.99766 * 1 2 3 21 21 H 1.08994 * 109.47412 * 60.00229 * 1 2 3 22 22 H 1.09002 * 109.47638 * 240.00161 * 2 1 3 23 23 H 1.08994 * 109.47412 * 119.99771 * 2 1 3 24 24 H 1.09000 * 113.61554 * 25.43273 * 6 4 3 25 25 H 1.09003 * 113.61107 * 254.52858 * 6 4 3 26 26 H 0.97006 * 119.99700 * 72.49788 * 9 7 6 27 27 H 1.07998 * 122.70428 * 180.02562 * 12 11 10 28 28 H 1.09003 * 109.47018 * 59.97533 * 14 13 12 29 29 H 0.96703 * 113.99939 * 299.99408 * 15 14 13 30 30 H 1.48502 * 110.00161 * 179.97438 * 16 14 13 31 31 H 1.48504 * 110.00102 * 301.31838 * 16 14 13 32 32 H 1.09003 * 113.61843 * 139.98190 * 18 7 6 33 33 H 1.09000 * 113.61596 * 270.80172 * 18 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.4308 1.4602 -0.0006 5 1 3.9290 0.5459 0.3218 6 6 4.0018 2.0467 -1.3024 7 6 4.9895 2.8316 -0.4232 8 1 5.9144 2.2934 -0.2157 9 7 5.2203 4.2039 -0.8812 10 6 6.4263 4.5430 -1.4745 11 7 7.4135 3.7252 -1.6707 12 6 8.4922 4.2199 -2.2514 13 6 8.4117 5.5144 -2.5599 14 6 9.4870 6.3340 -3.2256 15 8 10.6624 6.3275 -2.4130 16 14 8.8897 8.0855 -3.4401 17 16 6.8297 6.1005 -2.0527 18 6 3.9488 2.7253 0.7040 19 1 -0.3633 -1.0278 0.0005 20 1 -0.3633 0.5138 0.8900 21 1 -0.3634 0.5138 -0.8899 22 1 1.8934 -0.5138 -0.8900 23 1 1.8933 -0.5138 0.8899 24 1 3.2978 2.6808 -1.8413 25 1 4.4806 1.3053 -1.9421 26 1 4.5292 4.8753 -0.7692 27 1 9.3681 3.6236 -2.4600 28 1 9.7176 5.9067 -4.2015 29 1 10.5308 6.6945 -1.5280 30 1 9.9415 8.9041 -4.0950 31 1 7.6497 8.1029 -4.2569 32 1 4.3848 2.5317 1.6841 33 1 3.2311 3.5456 0.7145 There are 44 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 44 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10905470_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:39 Heat of formation + Delta-G solvation = 0.902870 kcal Electronic energy + Delta-G solvation = -16566.186888 eV Core-core repulsion = 13721.523704 eV Total energy + Delta-G solvation = -2844.663184 eV No. of doubly occupied orbitals = 44 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 257.087 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.04434 -40.25294 -38.12005 -37.56222 -34.95032 -31.90126 -31.09715 -26.97175 -26.75214 -25.54183 -24.05202 -23.66286 -21.41532 -20.69239 -19.47811 -18.45801 -17.74474 -17.07836 -16.66684 -16.45125 -16.36524 -15.89210 -15.74826 -15.37181 -14.86588 -14.54752 -14.13770 -13.93332 -13.57384 -13.54780 -12.97584 -12.86079 -12.54185 -12.32587 -12.18277 -12.06413 -11.93656 -11.85336 -11.11297 -10.76087 -10.44767 -10.22823 -10.13099 -8.72547 -5.12003 -0.01070 0.04763 0.71183 1.27745 1.59997 1.92082 2.05019 2.08971 2.74081 3.37456 3.45328 3.46642 3.70340 3.76446 3.78906 3.96123 4.10237 4.18135 4.32211 4.40184 4.49695 4.61435 4.65137 4.72617 4.76591 4.87136 4.88739 4.94909 4.97282 5.17268 5.24690 5.85518 6.05108 6.24914 6.53814 7.02306 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.055 3.945 3 O -0.373 6.373 4 C 0.067 3.933 5 H 0.092 0.908 6 C -0.170 4.170 7 C 0.141 3.859 8 H 0.121 0.879 9 N -0.679 5.679 10 C 0.327 3.673 11 N -0.552 5.552 12 C 0.120 3.880 13 C -0.308 4.308 14 C -0.010 4.010 15 O -0.537 6.537 16 Si 0.655 3.345 17 S 0.087 5.913 18 C -0.145 4.145 19 H 0.072 0.928 20 H 0.063 0.937 21 H 0.063 0.937 22 H 0.049 0.951 23 H 0.050 0.950 24 H 0.093 0.907 25 H 0.075 0.925 26 H 0.416 0.584 27 H 0.176 0.824 28 H 0.121 0.879 29 H 0.380 0.620 30 H -0.236 1.236 31 H -0.241 1.241 32 H 0.083 0.917 33 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.164 0.217 2.661 3.437 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.021 4.021 3 O -0.292 6.292 4 C 0.008 3.992 5 H 0.110 0.890 6 C -0.209 4.209 7 C 0.034 3.966 8 H 0.139 0.861 9 N -0.318 5.318 10 C -0.044 4.044 11 N -0.277 5.277 12 C -0.031 4.031 13 C -0.431 4.431 14 C -0.124 4.124 15 O -0.342 6.342 16 Si 0.556 3.444 17 S 0.337 5.663 18 C -0.183 4.183 19 H 0.091 0.909 20 H 0.082 0.918 21 H 0.082 0.918 22 H 0.068 0.932 23 H 0.068 0.932 24 H 0.112 0.888 25 H 0.094 0.906 26 H 0.253 0.747 27 H 0.193 0.807 28 H 0.138 0.862 29 H 0.227 0.773 30 H -0.159 1.159 31 H -0.165 1.165 32 H 0.101 0.899 33 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -2.808 1.009 1.738 3.453 hybrid contribution 0.575 -1.153 -0.347 1.334 sum -2.232 -0.144 1.391 2.634 Atomic orbital electron populations 1.21759 0.93570 1.02502 1.03205 1.22549 0.95788 0.83604 1.00181 1.87951 1.20021 1.26686 1.94557 1.23365 0.81700 0.97715 0.96441 0.88972 1.24070 0.98645 1.00353 0.97863 1.22267 0.98075 0.81813 0.94456 0.86117 1.44018 1.12316 1.11834 1.63605 1.23770 0.91351 0.93360 0.95874 1.66473 1.01133 1.35323 1.24770 1.21316 0.95592 0.91712 0.94501 1.25573 0.99879 0.99256 1.18360 1.24107 0.85129 1.07765 0.95428 1.86510 1.31763 1.86441 1.29532 0.94968 0.81619 0.77554 0.90303 1.83987 1.12449 1.11068 1.58827 1.23658 0.97565 0.98578 0.98528 0.90941 0.91778 0.91811 0.93245 0.93187 0.88823 0.90590 0.74661 0.80717 0.86166 0.77264 1.15914 1.16521 0.89862 0.88496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.12 10.28 37.16 0.38 0.50 16 2 C 0.06 -0.02 6.50 37.16 0.24 0.23 16 3 O -0.37 -0.49 10.35 -35.23 -0.36 -0.86 16 4 C 0.07 -0.04 4.31 -25.92 -0.11 -0.15 16 5 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 6 C -0.17 0.06 7.71 -25.92 -0.20 -0.14 16 7 C 0.14 -0.10 4.36 -67.12 -0.29 -0.39 16 8 H 0.12 0.04 7.66 -51.93 -0.40 -0.36 16 9 N -0.68 0.34 5.51 -54.99 -0.30 0.04 16 10 C 0.33 0.47 8.09 -87.68 -0.71 -0.24 16 11 N -0.55 -1.68 9.83 -15.21 -0.15 -1.83 16 12 C 0.12 0.25 11.22 -19.15 -0.21 0.03 16 13 C -0.31 -0.28 5.74 -36.03 -0.21 -0.49 16 14 C -0.01 0.00 2.99 36.00 0.11 0.11 16 15 O -0.54 -0.18 12.87 -35.23 -0.45 -0.63 16 16 Si 0.66 -0.33 31.05 -169.99 -5.28 -5.61 16 17 S 0.09 0.02 20.57 -107.50 -2.21 -2.19 16 18 C -0.14 0.22 7.66 -25.92 -0.20 0.02 16 19 H 0.07 -0.14 8.14 -51.92 -0.42 -0.57 16 20 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 21 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 22 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 23 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 25 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 26 H 0.42 -1.02 8.85 -40.82 -0.36 -1.38 16 27 H 0.18 0.16 8.06 -52.49 -0.42 -0.26 16 28 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 29 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 30 H -0.24 -0.49 7.11 56.52 0.40 -0.09 16 31 H -0.24 -0.42 7.11 56.52 0.40 -0.02 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.10 -0.15 8.12 -51.93 -0.42 -0.57 16 LS Contribution 295.62 15.07 4.45 4.45 Total: 0.00 -5.32 295.62 -10.12 -15.44 By element: Atomic # 1 Polarization: -3.68 SS G_CDS: -4.61 Total: -8.29 kcal Atomic # 6 Polarization: 0.68 SS G_CDS: -1.20 Total: -0.53 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.45 Total: -1.79 kcal Atomic # 8 Polarization: -0.67 SS G_CDS: -0.82 Total: -1.49 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.28 Total: -5.61 kcal Atomic # 16 Polarization: 0.02 SS G_CDS: -2.21 Total: -2.19 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -5.32 -10.12 -15.44 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10905470_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.339 kcal (2) G-P(sol) polarization free energy of solvation -5.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.020 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.436 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.903 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds