Wall clock time and date at job start Mon Mar 8 2021 06:21:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42896 * 109.47197 * 2 1 4 4 C 1.42903 * 114.00003 * 179.97438 * 3 2 1 5 5 H 1.09002 * 112.84956 * 18.81215 * 4 3 2 6 6 C 1.53784 * 113.61192 * 150.00352 * 4 3 2 7 7 C 1.53782 * 87.08139 * 139.98191 * 6 4 3 8 8 H 1.08999 * 113.60722 * 89.19904 * 7 6 4 9 9 N 1.46499 * 113.61410 * 220.01715 * 7 6 4 10 10 C 1.38609 * 119.99887 * 204.99943 * 9 7 6 11 11 N 1.29683 * 124.94801 * 180.02562 * 10 9 7 12 12 C 1.32124 * 116.86353 * 179.97438 * 11 10 9 13 13 C 1.50698 * 122.70945 * 179.97438 * 12 11 10 14 14 O 1.42903 * 109.46970 * 150.02269 * 13 12 11 15 15 Si 1.86307 * 109.46934 * 30.02933 * 13 12 11 16 16 C 1.33323 * 114.58053 * 0.02562 * 12 11 10 17 17 C 1.50705 * 125.95359 * 180.02562 * 16 12 11 18 18 S 1.70968 * 124.94876 * 359.97438 * 10 9 7 19 19 C 1.53773 * 113.61640 * 247.49980 * 4 3 2 20 20 H 1.08999 * 109.47294 * 59.99964 * 1 2 3 21 21 H 1.09005 * 109.47030 * 179.97438 * 1 2 3 22 22 H 1.08996 * 109.47194 * 299.99374 * 1 2 3 23 23 H 1.09005 * 109.47157 * 240.00032 * 2 1 3 24 24 H 1.08998 * 109.47031 * 120.00511 * 2 1 3 25 25 H 1.09002 * 113.61724 * 25.43421 * 6 4 3 26 26 H 1.09005 * 113.61537 * 254.53097 * 6 4 3 27 27 H 0.96995 * 119.99688 * 24.99984 * 9 7 6 28 28 H 1.08997 * 109.48033 * 270.03014 * 13 12 11 29 29 H 0.96690 * 114.00305 * 300.00242 * 14 13 12 30 30 H 1.48501 * 110.00162 * 58.67614 * 15 13 12 31 31 H 1.48498 * 110.00028 * 179.97438 * 15 13 12 32 32 H 1.08994 * 109.47703 * 179.97438 * 17 16 12 33 33 H 1.09000 * 109.46900 * 300.00245 * 17 16 12 34 34 H 1.09009 * 109.46914 * 59.99762 * 17 16 12 35 35 H 1.09000 * 113.61309 * 105.47452 * 19 4 3 36 36 H 1.09002 * 113.61683 * 334.57038 * 19 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 3.4309 1.4600 0.0006 5 1 3.9280 0.5456 -0.3230 6 6 3.9489 2.7251 -0.7039 7 6 4.9896 2.8314 0.4233 8 1 5.9144 2.2932 0.2156 9 7 5.2205 4.2037 0.8813 10 6 6.4265 4.5426 1.4746 11 7 6.7322 5.7237 1.9141 12 6 7.9297 5.8687 2.4532 13 6 8.4209 7.1824 3.0046 14 8 9.3365 6.9375 4.0741 15 14 6.9739 8.1692 3.6397 16 6 8.6688 4.7592 2.4690 17 6 10.0656 4.6343 3.0208 18 16 7.7273 3.4640 1.7347 19 6 4.0019 2.0464 1.3024 20 1 -0.3634 0.5138 -0.8900 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3633 0.5137 0.8900 23 1 1.8933 -0.5139 -0.8900 24 1 1.8933 -0.5139 0.8899 25 1 3.2304 3.5448 -0.7135 26 1 4.3849 2.5316 -1.6840 27 1 4.5295 4.8750 0.7694 28 1 8.9243 7.7420 2.2163 29 1 8.9557 6.4427 4.8124 30 1 6.2600 7.4036 4.6930 31 1 7.4450 9.4668 4.1868 32 1 10.4152 3.6095 2.8965 33 1 10.7298 5.3127 2.4852 34 1 10.0620 4.8906 4.0803 35 1 4.4807 1.3050 1.9421 36 1 3.2979 2.6805 1.8414 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10905470_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:41 Heat of formation + Delta-G solvation = -2.427235 kcal Electronic energy + Delta-G solvation = -18504.593209 eV Core-core repulsion = 15504.248002 eV Total energy + Delta-G solvation = -3000.345208 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.103 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.15804 -40.65775 -38.25057 -37.56009 -35.06570 -32.55201 -31.77131 -29.25002 -26.97504 -25.83956 -25.19086 -24.05793 -23.68448 -21.59266 -20.28542 -19.24059 -18.18070 -17.79279 -17.34703 -16.79074 -16.62623 -16.51784 -15.91595 -15.64518 -15.30596 -14.66823 -14.36704 -14.12241 -13.86392 -13.69471 -13.66532 -13.64134 -13.44531 -13.00159 -12.77122 -12.56572 -12.33727 -12.26115 -12.04600 -11.92627 -11.74432 -10.96298 -10.57431 -10.52598 -10.46827 -9.98189 -8.59497 -4.64336 0.04281 0.19709 0.79665 1.41161 1.82729 1.85731 1.98539 2.14112 2.69455 3.20296 3.31475 3.33547 3.53354 3.59447 3.63872 3.98092 4.06440 4.18318 4.21555 4.35612 4.36076 4.46682 4.56817 4.61306 4.66611 4.74448 4.77263 4.80385 4.89190 4.91756 4.93484 5.10202 5.16299 5.30815 5.61909 6.17151 6.27259 6.40211 6.97630 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.055 3.945 3 O -0.371 6.371 4 C 0.066 3.934 5 H 0.093 0.907 6 C -0.139 4.139 7 C 0.129 3.871 8 H 0.110 0.890 9 N -0.680 5.680 10 C 0.321 3.679 11 N -0.538 5.538 12 C 0.068 3.932 13 C -0.042 4.042 14 O -0.526 6.526 15 Si 0.722 3.278 16 C -0.242 4.242 17 C -0.059 4.059 18 S 0.097 5.903 19 C -0.171 4.171 20 H 0.064 0.936 21 H 0.072 0.928 22 H 0.063 0.937 23 H 0.050 0.950 24 H 0.050 0.950 25 H 0.102 0.898 26 H 0.085 0.915 27 H 0.415 0.585 28 H 0.124 0.876 29 H 0.375 0.625 30 H -0.268 1.268 31 H -0.261 1.261 32 H 0.058 0.942 33 H 0.076 0.924 34 H 0.079 0.921 35 H 0.077 0.923 36 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.517 -4.112 -2.252 4.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.021 4.021 3 O -0.290 6.290 4 C 0.008 3.992 5 H 0.111 0.889 6 C -0.178 4.178 7 C 0.023 3.977 8 H 0.128 0.872 9 N -0.320 5.320 10 C -0.050 4.050 11 N -0.265 5.265 12 C -0.062 4.062 13 C -0.154 4.154 14 O -0.331 6.331 15 Si 0.622 3.378 16 C -0.365 4.365 17 C -0.119 4.119 18 S 0.346 5.654 19 C -0.211 4.211 20 H 0.083 0.917 21 H 0.091 0.909 22 H 0.082 0.918 23 H 0.068 0.932 24 H 0.068 0.932 25 H 0.120 0.880 26 H 0.104 0.896 27 H 0.254 0.746 28 H 0.142 0.858 29 H 0.223 0.777 30 H -0.193 1.193 31 H -0.186 1.186 32 H 0.077 0.923 33 H 0.095 0.905 34 H 0.098 0.902 35 H 0.096 0.904 36 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.852 -4.071 -2.269 5.015 hybrid contribution 0.570 -0.102 0.912 1.080 sum -1.282 -4.173 -1.357 4.571 Atomic orbital electron populations 1.21762 0.93505 1.02539 1.03272 1.22561 0.95869 0.83511 1.00187 1.87966 1.19787 1.26755 1.94512 1.23359 0.82001 0.97696 0.96182 0.88876 1.23612 0.97231 0.98791 0.98136 1.22322 0.97988 0.81489 0.95942 0.87230 1.43888 1.12900 1.11316 1.63861 1.23313 0.92777 0.92054 0.96904 1.65734 1.18877 1.20294 1.21554 1.20076 0.88831 0.96968 1.00371 1.24466 1.02766 0.95591 0.92577 1.86620 1.38557 1.78008 1.29940 0.93608 0.79648 0.78519 0.86016 1.25119 1.03393 0.94642 1.13335 1.20140 0.88867 1.01610 1.01246 1.83924 1.07498 1.14255 1.59734 1.24129 0.98718 1.00242 0.97967 0.91739 0.90913 0.91768 0.93152 0.93212 0.87990 0.89621 0.74579 0.85834 0.77682 1.19257 1.18616 0.92313 0.90545 0.90238 0.90396 0.88213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 10.28 37.16 0.38 0.57 16 2 C 0.06 -0.06 6.50 37.16 0.24 0.18 16 3 O -0.37 -0.20 10.35 -35.23 -0.36 -0.57 16 4 C 0.07 -0.11 4.31 -25.92 -0.11 -0.23 16 5 H 0.09 -0.29 7.87 -51.93 -0.41 -0.70 16 6 C -0.14 0.33 7.66 -25.92 -0.20 0.13 16 7 C 0.13 -0.26 4.23 -67.12 -0.28 -0.54 16 8 H 0.11 -0.27 7.06 -51.93 -0.37 -0.64 16 9 N -0.68 0.34 5.51 -54.99 -0.30 0.04 16 10 C 0.32 0.55 8.24 -87.68 -0.72 -0.18 16 11 N -0.54 -1.59 8.95 -11.36 -0.10 -1.69 16 12 C 0.07 0.18 5.92 -84.18 -0.50 -0.32 16 13 C -0.04 -0.06 2.94 36.00 0.11 0.04 16 14 O -0.53 -0.72 10.18 -35.23 -0.36 -1.08 16 15 Si 0.72 1.14 32.08 -169.99 -5.45 -4.32 16 16 C -0.24 -0.48 6.50 -36.02 -0.23 -0.72 16 17 C -0.06 -0.03 8.91 36.01 0.32 0.30 16 18 S 0.10 0.09 21.69 -107.50 -2.33 -2.24 16 19 C -0.17 0.29 7.71 -25.92 -0.20 0.09 16 20 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 21 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 22 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 23 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 24 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 25 H 0.10 -0.20 8.12 -51.93 -0.42 -0.62 16 26 H 0.09 -0.26 8.14 -51.93 -0.42 -0.69 16 27 H 0.42 -0.50 8.85 -40.82 -0.36 -0.87 16 28 H 0.12 0.09 7.96 -51.93 -0.41 -0.32 16 29 H 0.38 -0.38 8.13 45.56 0.37 -0.01 16 30 H -0.27 -1.17 7.11 56.52 0.40 -0.77 16 31 H -0.26 -0.99 7.11 56.52 0.40 -0.58 16 32 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.08 -0.02 6.40 -51.92 -0.33 -0.35 16 35 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.10 -0.05 8.14 -51.93 -0.42 -0.48 16 LS Contribution 311.97 15.07 4.70 4.70 Total: 0.00 -5.03 311.97 -10.77 -15.80 By element: Atomic # 1 Polarization: -4.62 SS G_CDS: -5.36 Total: -9.98 kcal Atomic # 6 Polarization: 0.53 SS G_CDS: -1.20 Total: -0.67 kcal Atomic # 7 Polarization: -1.25 SS G_CDS: -0.40 Total: -1.65 kcal Atomic # 8 Polarization: -0.92 SS G_CDS: -0.72 Total: -1.65 kcal Atomic # 14 Polarization: 1.14 SS G_CDS: -5.45 Total: -4.32 kcal Atomic # 16 Polarization: 0.09 SS G_CDS: -2.33 Total: -2.24 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -5.03 -10.77 -15.80 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10905470_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.370 kcal (2) G-P(sol) polarization free energy of solvation -5.028 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.797 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.427 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds