Wall clock time and date at job start Mon Mar 8 2021 06:21:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.42899 * 109.47173 * 2 1 4 4 C 1.42897 * 114.00053 * 180.02562 * 3 2 1 5 5 H 1.08992 * 112.90603 * 341.24677 * 4 3 2 6 6 C 1.53782 * 113.61360 * 112.50048 * 4 3 2 7 7 C 1.53780 * 87.08141 * 139.97631 * 6 4 3 8 8 H 1.09008 * 113.68948 * 89.12574 * 7 6 4 9 9 N 1.46492 * 113.61867 * 220.01567 * 7 6 4 10 10 C 1.39143 * 120.00234 * 252.50248 * 9 7 6 11 11 N 1.32339 * 119.71975 * 0.02562 * 10 9 7 12 12 C 1.32004 * 121.64689 * 179.97438 * 11 10 9 13 13 C 1.37985 * 120.90338 * 0.02562 * 12 11 10 14 14 C 1.50699 * 120.32490 * 179.97438 * 13 12 11 15 15 O 1.42907 * 109.47339 * 244.99991 * 14 13 12 16 16 Si 1.86298 * 109.47461 * 4.99962 * 14 13 12 17 17 C 1.38899 * 119.34704 * 0.02562 * 13 12 11 18 18 C 1.38450 * 118.48384 * 359.97438 * 17 13 12 19 19 F 1.35099 * 120.47056 * 180.02562 * 18 17 13 20 20 C 1.53782 * 87.08389 * 334.56734 * 7 6 4 21 21 H 1.09005 * 109.46942 * 180.02562 * 1 2 3 22 22 H 1.09004 * 109.47309 * 299.99971 * 1 2 3 23 23 H 1.08997 * 109.47474 * 60.00203 * 1 2 3 24 24 H 1.08997 * 109.46799 * 239.99564 * 2 1 3 25 25 H 1.08995 * 109.47011 * 119.99558 * 2 1 3 26 26 H 1.09005 * 113.61487 * 25.43331 * 6 4 3 27 27 H 1.08996 * 113.61609 * 254.52485 * 6 4 3 28 28 H 0.96998 * 120.00236 * 72.49700 * 9 7 6 29 29 H 1.08004 * 119.54865 * 180.28235 * 12 11 10 30 30 H 1.09001 * 109.47060 * 125.00258 * 14 13 12 31 31 H 0.96697 * 113.99409 * 59.99736 * 15 14 13 32 32 H 1.48505 * 109.99699 * 58.67820 * 16 14 13 33 33 H 1.48492 * 110.00220 * 179.97438 * 16 14 13 34 34 H 1.08001 * 120.75704 * 180.02562 * 17 13 12 35 35 H 1.09000 * 113.61486 * 139.97457 * 20 7 6 36 36 H 1.08995 * 113.61176 * 270.79707 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.4309 1.4601 -0.0006 5 1 3.9290 0.5458 0.3218 6 6 4.0018 2.0465 -1.3025 7 6 4.9895 2.8315 -0.4233 8 1 5.9145 2.2933 -0.2158 9 7 5.2204 4.2037 -0.8814 10 6 6.4310 4.5439 -1.4770 11 7 7.3698 3.6234 -1.6274 12 6 8.5317 3.9042 -2.1876 13 6 8.8113 5.1776 -2.6394 14 6 10.1423 5.4838 -3.2764 15 8 10.8603 6.4096 -2.4582 16 14 11.1266 3.9111 -3.4450 17 6 7.8544 6.1747 -2.5004 18 6 6.6449 5.8513 -1.9091 19 9 5.6855 6.7897 -1.7542 20 6 3.9489 2.7252 0.7039 21 1 -0.3633 -1.0277 0.0005 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8900 24 1 1.8933 -0.5139 -0.8899 25 1 1.8933 -0.5137 0.8900 26 1 3.2978 2.6806 -1.8414 27 1 4.4807 1.3051 -1.9422 28 1 4.5294 4.8751 -0.7695 29 1 9.2720 3.1255 -2.2975 30 1 9.9815 5.9193 -4.2626 31 1 11.0391 6.0877 -1.5641 32 1 10.3764 2.9282 -4.2675 33 1 12.4412 4.1995 -4.0725 34 1 8.0490 7.1791 -2.8463 35 1 4.3849 2.5317 1.6839 36 1 3.2313 3.5456 0.7143 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_10905470_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:44 Heat of formation + Delta-G solvation = -48.062544 kcal Electronic energy + Delta-G solvation = -20219.486288 eV Core-core repulsion = 16814.093582 eV Total energy + Delta-G solvation = -3405.392706 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -49.98059 -41.51333 -40.48664 -38.21965 -37.53253 -35.18683 -33.22585 -31.93785 -31.05022 -26.87932 -26.68992 -25.62643 -24.09135 -23.61853 -22.85240 -20.99236 -19.24651 -18.83475 -18.34710 -17.81038 -17.44686 -17.03996 -16.66851 -16.45718 -16.09389 -15.93858 -15.63123 -15.39616 -14.88683 -14.61532 -14.32990 -14.09064 -13.93996 -13.53421 -13.51348 -13.42451 -12.92300 -12.59741 -12.44458 -12.15562 -12.09472 -11.90045 -11.80478 -11.20571 -10.72757 -10.69609 -10.41500 -10.40974 -8.78485 -4.96860 -0.10042 0.07952 1.32366 1.67677 1.92003 2.01315 2.51330 2.78466 3.01782 3.29183 3.47576 3.49697 3.55312 3.67298 3.83255 3.85011 3.88598 3.99033 4.17249 4.25834 4.41476 4.42008 4.46623 4.48272 4.68872 4.71318 4.73033 4.82473 4.93576 4.96332 4.98559 5.02200 5.08025 5.24840 5.42404 5.95697 6.15356 6.31652 6.79985 6.91839 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.050 3.950 3 O -0.396 6.396 4 C 0.065 3.935 5 H 0.109 0.891 6 C -0.169 4.169 7 C 0.142 3.858 8 H 0.125 0.875 9 N -0.703 5.703 10 C 0.382 3.618 11 N -0.524 5.524 12 C 0.150 3.850 13 C -0.207 4.207 14 C -0.060 4.060 15 O -0.556 6.556 16 Si 0.777 3.223 17 C -0.041 4.041 18 C -0.040 4.040 19 F -0.142 7.142 20 C -0.141 4.141 21 H 0.086 0.914 22 H 0.058 0.942 23 H 0.054 0.946 24 H 0.054 0.946 25 H 0.061 0.939 26 H 0.078 0.922 27 H 0.075 0.925 28 H 0.415 0.585 29 H 0.187 0.813 30 H 0.110 0.890 31 H 0.396 0.604 32 H -0.281 1.281 33 H -0.298 1.298 34 H 0.153 0.847 35 H 0.093 0.907 36 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.361 -4.116 2.795 5.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.026 4.026 3 O -0.316 6.316 4 C 0.007 3.993 5 H 0.127 0.873 6 C -0.208 4.208 7 C 0.037 3.963 8 H 0.143 0.857 9 N -0.335 5.335 10 C 0.144 3.856 11 N -0.241 5.241 12 C -0.007 4.007 13 C -0.212 4.212 14 C -0.170 4.170 15 O -0.364 6.364 16 Si 0.682 3.318 17 C -0.067 4.067 18 C -0.066 4.066 19 F -0.121 7.121 20 C -0.179 4.179 21 H 0.105 0.895 22 H 0.077 0.923 23 H 0.073 0.927 24 H 0.072 0.928 25 H 0.079 0.921 26 H 0.096 0.904 27 H 0.094 0.906 28 H 0.253 0.747 29 H 0.204 0.796 30 H 0.127 0.873 31 H 0.246 0.754 32 H -0.207 1.207 33 H -0.225 1.225 34 H 0.171 0.829 35 H 0.111 0.889 36 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 1.338 -5.147 2.097 5.717 hybrid contribution -0.786 1.748 -0.733 2.053 sum 0.552 -3.399 1.364 3.703 Atomic orbital electron populations 1.21783 0.93564 1.03210 1.02500 1.22675 0.95921 0.83112 1.00907 1.87931 1.21197 1.27768 1.94671 1.23512 0.80994 0.98570 0.96255 0.87340 1.24011 0.98601 1.00228 0.98001 1.22200 0.98029 0.81721 0.94355 0.85696 1.44605 1.13258 1.12305 1.63317 1.18592 0.88455 0.87550 0.91001 1.67321 1.02401 1.33447 1.20927 1.22720 0.92460 0.95043 0.90447 1.21000 0.98800 0.94310 1.07092 1.25016 0.91351 1.04814 0.95854 1.86484 1.75860 1.44604 1.29462 0.93835 0.75721 0.74117 0.88098 1.21445 0.89894 1.01490 0.93868 1.18162 0.89987 0.86510 1.11934 1.91464 1.62278 1.63869 1.94506 1.23610 0.97294 0.98100 0.98888 0.89516 0.92328 0.92660 0.92755 0.92111 0.90387 0.90583 0.74716 0.79636 0.87267 0.75382 1.20731 1.22539 0.82930 0.88865 0.89272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.15 10.28 71.98 0.74 0.89 16 2 C 0.05 -0.02 6.50 71.98 0.47 0.45 16 3 O -0.40 -1.42 10.35 -148.98 -1.54 -2.97 16 4 C 0.06 -0.06 4.31 31.12 0.13 0.08 16 5 H 0.11 -0.48 7.87 -2.39 -0.02 -0.50 16 6 C -0.17 -0.03 7.71 31.12 0.24 0.21 16 7 C 0.14 -0.13 4.27 45.52 0.19 0.07 16 8 H 0.13 -0.13 7.41 -2.38 -0.02 -0.15 16 9 N -0.70 -0.96 5.51 -321.79 -1.77 -2.74 16 10 C 0.38 1.46 7.49 133.08 1.00 2.46 16 11 N -0.52 -1.39 9.13 -193.03 -1.76 -3.15 16 12 C 0.15 -0.19 9.84 84.61 0.83 0.64 16 13 C -0.21 0.18 5.36 -19.77 -0.11 0.08 16 14 C -0.06 0.16 2.82 71.24 0.20 0.36 16 15 O -0.56 0.90 12.84 -148.98 -1.91 -1.01 16 16 Si 0.78 -3.63 29.83 68.60 2.05 -1.58 16 17 C -0.04 -0.08 9.82 22.48 0.22 0.14 16 18 C -0.04 -0.18 7.35 22.59 0.17 -0.01 16 19 F -0.14 -0.89 16.65 44.97 0.75 -0.15 16 20 C -0.14 0.28 7.66 31.12 0.24 0.52 16 21 H 0.09 -0.36 8.14 -2.38 -0.02 -0.38 16 22 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 23 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 24 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 25 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 26 H 0.08 0.24 8.14 -2.38 -0.02 0.23 16 27 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 28 H 0.41 0.11 8.20 -92.71 -0.76 -0.65 16 29 H 0.19 -1.32 4.90 -2.91 -0.01 -1.34 16 30 H 0.11 -0.17 7.96 -2.39 -0.02 -0.19 16 31 H 0.40 -3.84 8.70 -74.06 -0.64 -4.48 16 32 H -0.28 0.03 7.11 99.48 0.71 0.73 16 33 H -0.30 -0.95 7.11 99.48 0.71 -0.25 16 34 H 0.15 0.07 8.06 -2.91 -0.02 0.05 16 35 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.09 -0.05 8.12 -2.39 -0.02 -0.07 16 Total: 0.00 -13.30 308.28 -0.13 -13.43 By element: Atomic # 1 Polarization: -7.46 SS G_CDS: -0.26 Total: -7.72 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: 4.33 Total: 5.88 kcal Atomic # 7 Polarization: -2.35 SS G_CDS: -3.53 Total: -5.88 kcal Atomic # 8 Polarization: -0.53 SS G_CDS: -3.46 Total: -3.98 kcal Atomic # 9 Polarization: -0.89 SS G_CDS: 0.75 Total: -0.15 kcal Atomic # 14 Polarization: -3.63 SS G_CDS: 2.05 Total: -1.58 kcal Total: -13.30 -0.13 -13.43 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10905470_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.632 kcal (2) G-P(sol) polarization free energy of solvation -13.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.128 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.430 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds