Wall clock time and date at job start Mon Mar 8 2021 06:44:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34225 * 116.99814 * 2 1 4 4 O 1.20826 * 120.00428 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00010 * 179.97438 * 3 2 1 6 6 H 1.09003 * 112.85214 * 48.80465 * 5 3 2 7 7 C 1.53787 * 113.61790 * 179.97438 * 5 3 2 8 8 C 1.53781 * 87.07987 * 140.06564 * 7 5 3 9 9 H 1.09002 * 113.61228 * 89.11929 * 8 7 5 10 10 N 1.46500 * 113.61339 * 219.93875 * 8 7 5 11 11 C 1.38411 * 119.99932 * 203.47668 * 10 8 7 12 12 N 1.32488 * 119.21541 * 359.72504 * 11 10 8 13 13 C 1.32283 * 120.73756 * 179.72280 * 12 11 10 14 14 C 1.38599 * 119.19800 * 0.54052 * 13 12 11 15 15 C 1.50694 * 120.72402 * 179.75424 * 14 13 12 16 16 O 1.42905 * 109.47476 * 244.98431 * 15 14 13 17 17 Si 1.86304 * 109.46982 * 4.97752 * 15 14 13 18 18 C 1.38603 * 118.55832 * 359.73444 * 14 13 12 19 19 N 1.32276 * 119.19573 * 0.02562 * 18 14 13 20 20 C 1.53779 * 113.69072 * 277.53760 * 5 3 2 21 21 H 1.08999 * 109.46669 * 60.00348 * 1 2 3 22 22 H 1.08999 * 109.46772 * 179.97438 * 1 2 3 23 23 H 1.08997 * 109.47495 * 300.00417 * 1 2 3 24 24 H 1.09005 * 113.61051 * 25.51968 * 7 5 3 25 25 H 1.08993 * 113.61359 * 254.62005 * 7 5 3 26 26 H 0.96998 * 120.00149 * 23.46564 * 10 8 7 27 27 H 1.08003 * 120.39885 * 180.25481 * 13 12 11 28 28 H 1.08994 * 109.47349 * 124.97856 * 15 14 13 29 29 H 0.96695 * 114.00560 * 179.97438 * 16 15 14 30 30 H 1.48507 * 110.00163 * 178.67889 * 17 15 14 31 31 H 1.48501 * 110.00295 * 300.00441 * 17 15 14 32 32 H 1.08003 * 120.40482 * 179.97438 * 18 14 13 33 33 H 1.09003 * 113.61775 * 105.46356 * 20 5 3 34 34 H 1.08996 * 113.61960 * 334.55082 * 20 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0240 0.6362 -0.7549 7 6 4.1078 2.7143 -0.0001 8 6 5.1820 2.2270 0.9865 9 1 6.0813 1.8482 0.5008 10 7 5.4734 3.1841 2.0566 11 6 6.6928 3.1414 2.7102 12 7 7.5828 2.2249 2.3592 13 6 8.7596 2.1603 2.9599 14 6 9.0511 3.0586 3.9743 15 6 10.3788 3.0124 4.6856 16 8 10.1733 2.6629 6.0559 17 14 11.4723 1.7388 3.8774 18 6 8.0951 4.0007 4.3201 19 7 6.9398 4.0140 3.6760 20 6 4.1924 1.1231 1.3969 21 1 -0.3632 0.5138 -0.8900 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3634 0.5139 0.8899 24 1 3.4177 3.4406 0.4294 25 1 4.5098 3.0290 -0.9631 26 1 4.8120 3.8479 2.3070 27 1 9.4827 1.4136 2.6666 28 1 10.8563 3.9905 4.6278 29 1 10.9871 2.6139 6.5758 30 1 12.7962 1.7059 4.5495 31 1 10.8325 0.4007 3.9495 32 1 8.2907 4.7147 5.1065 33 1 4.6631 0.1537 1.5614 34 1 3.5257 1.4142 2.2085 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10970306_12175864.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:44:46 Heat of formation + Delta-G solvation = -21.847003 kcal Electronic energy + Delta-G solvation = -19537.836646 eV Core-core repulsion = 16246.238082 eV Total energy + Delta-G solvation = -3291.598564 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.110 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -42.13409 -41.71444 -39.79471 -38.08782 -37.34607 -35.60387 -34.63830 -32.30281 -29.37055 -27.35843 -26.91911 -26.11518 -25.61730 -23.18679 -22.21490 -20.80985 -19.32820 -19.12126 -18.61503 -18.29806 -17.62831 -17.35410 -16.70186 -16.42766 -15.99150 -15.92253 -15.60782 -15.30880 -14.56464 -14.53182 -14.27594 -13.97351 -13.74064 -13.61738 -13.31305 -13.07596 -12.54051 -12.38509 -12.18944 -12.01859 -11.78225 -11.77653 -11.68367 -11.35418 -11.17486 -10.70525 -9.96896 -9.09076 -5.05143 0.10227 0.21115 1.16741 1.19642 1.51067 1.59473 1.87746 1.95571 2.77987 3.14426 3.21369 3.26376 3.32324 3.61254 3.65470 3.67402 3.78964 3.86593 3.98391 4.12563 4.16892 4.24392 4.41090 4.46783 4.50682 4.57297 4.60072 4.74189 4.80043 4.81871 5.02563 5.31686 5.39678 5.80525 6.02667 6.35839 6.44848 6.74244 7.32481 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.108 4.108 6 H 0.132 0.868 7 C -0.128 4.128 8 C 0.143 3.857 9 H 0.129 0.871 10 N -0.684 5.684 11 C 0.567 3.433 12 N -0.561 5.561 13 C 0.201 3.799 14 C -0.246 4.246 15 C -0.055 4.055 16 O -0.538 6.538 17 Si 0.677 3.323 18 C 0.224 3.776 19 N -0.569 5.569 20 C -0.136 4.136 21 H 0.064 0.936 22 H 0.103 0.897 23 H 0.063 0.937 24 H 0.103 0.897 25 H 0.090 0.910 26 H 0.417 0.583 27 H 0.167 0.833 28 H 0.078 0.922 29 H 0.381 0.619 30 H -0.257 1.257 31 H -0.252 1.252 32 H 0.169 0.831 33 H 0.090 0.910 34 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.226 -0.878 -1.918 3.855 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.392 6.392 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.166 4.166 8 C 0.037 3.963 9 H 0.146 0.854 10 N -0.320 5.320 11 C 0.211 3.789 12 N -0.283 5.283 13 C 0.033 3.967 14 C -0.254 4.254 15 C -0.166 4.166 16 O -0.345 6.345 17 Si 0.578 3.422 18 C 0.056 3.944 19 N -0.290 5.290 20 C -0.175 4.175 21 H 0.083 0.917 22 H 0.122 0.878 23 H 0.082 0.918 24 H 0.121 0.879 25 H 0.109 0.891 26 H 0.255 0.745 27 H 0.184 0.816 28 H 0.096 0.904 29 H 0.229 0.771 30 H -0.182 1.182 31 H -0.177 1.177 32 H 0.186 0.814 33 H 0.109 0.891 34 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 1.871 -1.433 -2.639 3.539 hybrid contribution 0.414 0.355 1.812 1.892 sum 2.286 -1.079 -0.827 2.659 Atomic orbital electron populations 1.23323 0.75946 1.04010 1.02705 1.86518 1.23713 1.33284 1.83785 1.23483 0.91605 0.81421 0.72057 1.90687 1.66997 1.36439 1.45088 1.22289 0.87664 1.00974 1.01854 0.84975 1.23412 0.97237 0.94966 1.00974 1.22463 0.97763 0.88882 0.87219 0.85358 1.44134 1.13244 1.37202 1.37382 1.19405 0.87071 0.85847 0.86566 1.67912 1.03392 1.24647 1.32338 1.22775 0.91654 0.93390 0.88836 1.20611 0.99271 1.02527 1.02947 1.24410 0.99091 1.07157 0.85900 1.86593 1.35941 1.92190 1.19808 0.95257 0.77633 0.79185 0.90165 1.22811 0.85576 0.93226 0.92791 1.67983 1.23088 1.27073 1.10870 1.23518 0.98114 1.01351 0.94523 0.91712 0.87843 0.91788 0.87888 0.89146 0.74524 0.81594 0.90386 0.77058 1.18203 1.17670 0.81381 0.89148 0.89165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.55 10.57 -39.25 -0.41 -0.97 16 3 C 0.47 0.86 7.49 36.01 0.27 1.13 16 4 O -0.50 -2.34 15.65 -18.75 -0.29 -2.63 16 5 C -0.11 0.13 4.25 -90.96 -0.39 -0.26 16 6 H 0.13 -0.42 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.19 7.15 -25.92 -0.19 0.00 16 8 C 0.14 -0.15 4.22 -67.10 -0.28 -0.43 16 9 H 0.13 -0.14 7.41 -51.93 -0.38 -0.53 16 10 N -0.68 -0.41 5.51 -54.98 -0.30 -0.71 16 11 C 0.57 1.54 8.43 -322.81 -2.72 -1.18 16 12 N -0.56 -1.30 9.15 -13.93 -0.13 -1.43 16 13 C 0.20 0.18 9.92 -17.22 -0.17 0.01 16 14 C -0.25 -0.18 5.40 -104.36 -0.56 -0.74 16 15 C -0.05 0.07 2.82 36.00 0.10 0.17 16 16 O -0.54 -0.05 12.82 -35.23 -0.45 -0.50 16 17 Si 0.68 -1.40 29.92 -169.99 -5.09 -6.48 16 18 C 0.22 0.37 10.99 -17.23 -0.19 0.18 16 19 N -0.57 -1.84 10.46 -13.93 -0.15 -1.98 16 20 C -0.14 0.15 7.44 -25.90 -0.19 -0.05 16 21 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 22 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 23 H 0.06 -0.01 8.13 -51.93 -0.42 -0.44 16 24 H 0.10 -0.03 7.41 -51.93 -0.38 -0.41 16 25 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 26 H 0.42 -0.06 8.83 -40.82 -0.36 -0.42 16 27 H 0.17 -0.26 5.04 -52.48 -0.26 -0.52 16 28 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 29 H 0.38 -1.46 8.74 45.56 0.40 -1.07 16 30 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 31 H -0.25 -0.24 7.06 56.52 0.40 0.16 16 32 H 0.17 -0.07 8.06 -52.48 -0.42 -0.49 16 33 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.09 -0.01 8.10 -51.93 -0.42 -0.43 16 LS Contribution 297.29 15.07 4.48 4.48 Total: 0.00 -8.34 297.29 -9.58 -17.93 By element: Atomic # 1 Polarization: -3.60 SS G_CDS: -3.99 Total: -7.59 kcal Atomic # 6 Polarization: 3.14 SS G_CDS: -3.25 Total: -0.12 kcal Atomic # 7 Polarization: -3.54 SS G_CDS: -0.58 Total: -4.12 kcal Atomic # 8 Polarization: -2.94 SS G_CDS: -1.16 Total: -4.10 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.09 Total: -6.48 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -8.34 -9.58 -17.93 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10970306_12175864.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.922 kcal (2) G-P(sol) polarization free energy of solvation -8.342 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.925 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds