Wall clock time and date at job start Mon Mar 8 2021 06:44:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45208 * 1 3 3 C 1.34224 * 116.99764 * 2 1 4 4 O 1.20827 * 120.00384 * 0.02562 * 3 2 1 5 5 C 1.50705 * 119.99776 * 180.02562 * 3 2 1 6 6 H 1.09002 * 112.84622 * 311.20109 * 5 3 2 7 7 C 1.53778 * 113.61536 * 82.50353 * 5 3 2 8 8 C 1.53777 * 87.08140 * 139.98260 * 7 5 3 9 9 H 1.09004 * 113.69029 * 89.12824 * 8 7 5 10 10 N 1.46495 * 113.61468 * 220.01872 * 8 7 5 11 11 C 1.39009 * 120.00247 * 252.49775 * 10 8 7 12 12 N 1.32390 * 119.70643 * 179.97438 * 11 10 8 13 13 C 1.31974 * 121.62134 * 179.97438 * 12 11 10 14 14 C 1.38025 * 120.85781 * 0.02562 * 13 12 11 15 15 C 1.50701 * 120.33454 * 180.02562 * 14 13 12 16 16 O 1.42904 * 109.46728 * 244.99353 * 15 14 13 17 17 Si 1.86294 * 109.47190 * 4.99619 * 15 14 13 18 18 C 1.38885 * 119.32533 * 359.97438 * 14 13 12 19 19 C 1.38298 * 118.50933 * 0.02562 * 18 14 13 20 20 C 1.53774 * 87.08056 * 334.56792 * 8 7 5 21 21 H 1.08996 * 109.47123 * 179.97438 * 1 2 3 22 22 H 1.08999 * 109.46724 * 300.00229 * 1 2 3 23 23 H 1.09002 * 109.46865 * 59.99802 * 1 2 3 24 24 H 1.08995 * 113.61463 * 25.43231 * 7 5 3 25 25 H 1.09003 * 113.61600 * 254.53512 * 7 5 3 26 26 H 0.97000 * 120.00156 * 72.49523 * 10 8 7 27 27 H 1.08006 * 119.57174 * 179.72360 * 13 12 11 28 28 H 1.08996 * 109.46780 * 124.99856 * 15 14 13 29 29 H 0.96700 * 113.99745 * 60.00034 * 16 15 14 30 30 H 1.48498 * 109.99931 * 179.97438 * 17 15 14 31 31 H 1.48500 * 110.00264 * 301.31985 * 17 15 14 32 32 H 1.08000 * 120.74166 * 180.02562 * 18 14 13 33 33 H 1.07994 * 120.45391 * 179.97438 * 19 18 14 34 34 H 1.09006 * 113.61494 * 139.98462 * 20 8 7 35 35 H 1.09003 * 113.61933 * 270.88168 * 20 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0239 0.6361 0.7549 7 6 4.1906 1.1238 -1.3978 8 6 5.1807 2.2270 -0.9886 9 1 6.0813 1.8495 -0.5042 10 7 5.4694 3.1834 -2.0600 11 6 6.7047 3.1616 -2.6970 12 7 6.9592 4.0283 -3.6649 13 6 8.1189 4.0415 -4.2946 14 6 9.1145 3.1447 -3.9636 15 6 10.4346 3.1707 -4.6901 16 8 10.5986 1.9553 -5.4236 17 14 10.4680 4.6152 -5.8660 18 6 8.8877 2.2188 -2.9536 19 6 7.6627 2.2290 -2.3117 20 6 4.1078 2.7141 -0.0005 21 1 -0.3633 -1.0276 -0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 3.5227 1.4153 -2.2083 25 1 4.6609 0.1545 -1.5635 26 1 4.7985 3.8319 -2.3250 27 1 8.2894 4.7603 -5.0825 28 1 11.2447 3.2713 -3.9678 29 1 9.9114 1.7999 -6.0859 30 1 11.7650 4.6524 -6.5882 31 1 9.3489 4.5064 -6.8361 32 1 9.6508 1.5069 -2.6757 33 1 7.4526 1.5228 -1.5222 34 1 4.5113 3.0288 0.9620 35 1 3.4172 3.4405 -0.4289 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10970306_13915762.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:44:48 Heat of formation + Delta-G solvation = -39.754829 kcal Electronic energy + Delta-G solvation = -19409.776813 eV Core-core repulsion = 16182.827618 eV Total energy + Delta-G solvation = -3226.949194 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.115 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.01274 -41.32907 -39.83444 -37.99813 -37.38353 -35.41376 -33.39348 -31.38257 -29.37618 -27.27667 -27.02070 -25.85459 -24.84352 -23.05021 -21.97485 -20.80595 -19.16009 -18.66008 -18.48948 -17.94740 -17.45495 -17.15781 -16.62527 -16.41490 -16.20838 -15.65861 -15.38508 -15.24175 -14.53040 -14.36458 -14.22436 -14.03331 -13.80271 -13.64720 -13.34490 -13.08732 -12.59673 -12.55559 -12.26817 -12.06714 -11.91116 -11.82717 -11.42526 -11.14189 -10.76467 -10.53089 -10.36114 -8.75224 -4.94583 0.23022 0.41679 1.10657 1.30814 1.58067 1.60306 1.97848 2.10491 2.80558 3.09480 3.16543 3.40137 3.45005 3.52902 3.61942 3.76879 3.87057 3.97430 4.04564 4.12545 4.19249 4.21977 4.30995 4.40738 4.47922 4.55444 4.55997 4.63785 4.71254 4.73563 4.93727 5.01309 5.30189 5.34095 5.50082 5.95647 6.42279 6.48794 6.68306 7.14532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.471 3.529 4 O -0.504 6.504 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.137 4.137 8 C 0.133 3.867 9 H 0.119 0.881 10 N -0.710 5.710 11 C 0.408 3.592 12 N -0.539 5.539 13 C 0.155 3.845 14 C -0.233 4.233 15 C -0.059 4.059 16 O -0.532 6.532 17 Si 0.679 3.321 18 C -0.005 4.005 19 C -0.239 4.239 20 C -0.126 4.126 21 H 0.104 0.896 22 H 0.064 0.936 23 H 0.064 0.936 24 H 0.093 0.907 25 H 0.089 0.911 26 H 0.408 0.592 27 H 0.155 0.845 28 H 0.116 0.884 29 H 0.375 0.625 30 H -0.256 1.256 31 H -0.258 1.258 32 H 0.136 0.864 33 H 0.134 0.866 34 H 0.090 0.910 35 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.041 -1.527 2.578 2.996 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.391 6.391 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.177 4.177 8 C 0.027 3.973 9 H 0.137 0.863 10 N -0.342 5.342 11 C 0.173 3.827 12 N -0.256 5.256 13 C -0.002 4.002 14 C -0.238 4.238 15 C -0.170 4.170 16 O -0.338 6.338 17 Si 0.581 3.419 18 C -0.031 4.031 19 C -0.264 4.264 20 C -0.164 4.164 21 H 0.122 0.878 22 H 0.083 0.917 23 H 0.082 0.918 24 H 0.112 0.888 25 H 0.108 0.892 26 H 0.245 0.755 27 H 0.172 0.828 28 H 0.134 0.866 29 H 0.223 0.777 30 H -0.181 1.181 31 H -0.183 1.183 32 H 0.154 0.846 33 H 0.152 0.848 34 H 0.108 0.892 35 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -0.265 -0.557 2.037 2.129 hybrid contribution -0.426 -1.416 -0.250 1.500 sum -0.691 -1.973 1.788 2.751 Atomic orbital electron populations 1.23332 0.75860 1.04051 1.02741 1.86514 1.23781 1.33248 1.83782 1.23456 0.91582 0.81459 0.72143 1.90694 1.66972 1.36437 1.44985 1.22305 0.87853 1.01014 1.01722 0.85028 1.23553 0.98349 1.01015 0.94760 1.22457 0.97439 0.89549 0.87856 0.86338 1.44477 1.13471 1.38280 1.37960 1.18435 0.86253 0.89489 0.88567 1.67167 1.22801 1.25294 1.10297 1.22285 0.87138 0.95086 0.95741 1.20931 0.98641 1.01530 1.02703 1.24754 0.96429 0.95694 1.00113 1.86596 1.53702 1.39569 1.53949 0.95088 0.80389 0.84595 0.81838 1.21204 0.95615 0.94886 0.91354 1.21479 0.95088 1.03781 1.06020 1.23385 0.97192 0.94971 1.00853 0.87805 0.91682 0.91762 0.88849 0.89217 0.75499 0.82795 0.86572 0.77729 1.18074 1.18340 0.84622 0.84788 0.89161 0.87742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.33 10.57 -39.24 -0.41 -0.74 16 3 C 0.47 0.53 7.48 36.01 0.27 0.80 16 4 O -0.50 -2.07 15.65 -18.75 -0.29 -2.36 16 5 C -0.11 0.25 4.26 -90.96 -0.39 -0.14 16 6 H 0.13 -0.57 8.14 -51.93 -0.42 -0.99 16 7 C -0.14 0.36 7.43 -25.92 -0.19 0.16 16 8 C 0.13 -0.37 4.03 -67.13 -0.27 -0.64 16 9 H 0.12 -0.49 6.10 -51.93 -0.32 -0.81 16 10 N -0.71 0.48 5.53 -53.15 -0.29 0.19 16 11 C 0.41 0.48 7.65 -155.02 -1.19 -0.71 16 12 N -0.54 -1.37 10.39 -12.43 -0.13 -1.50 16 13 C 0.16 0.16 9.84 -17.57 -0.17 -0.01 16 14 C -0.23 -0.06 5.36 -104.46 -0.56 -0.62 16 15 C -0.06 0.02 2.82 36.01 0.10 0.13 16 16 O -0.53 -0.56 12.84 -35.23 -0.45 -1.01 16 17 Si 0.68 -0.65 29.91 -169.99 -5.08 -5.74 16 18 C 0.00 0.00 9.84 -39.32 -0.39 -0.39 16 19 C -0.24 0.03 9.29 -39.22 -0.36 -0.34 16 20 C -0.13 0.30 7.16 -25.93 -0.19 0.11 16 21 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 22 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 24 H 0.09 -0.12 8.09 -51.93 -0.42 -0.54 16 25 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 26 H 0.41 -0.25 8.85 -40.82 -0.36 -0.61 16 27 H 0.16 -0.10 4.85 -52.48 -0.25 -0.35 16 28 H 0.12 -0.14 7.96 -51.93 -0.41 -0.55 16 29 H 0.38 -0.58 8.70 45.56 0.40 -0.19 16 30 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 31 H -0.26 -0.25 7.01 56.52 0.40 0.14 16 32 H 0.14 -0.16 8.06 -52.49 -0.42 -0.58 16 33 H 0.13 -0.31 6.03 -52.49 -0.32 -0.63 16 34 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 35 H 0.10 -0.09 7.41 -51.93 -0.38 -0.47 16 LS Contribution 299.59 15.07 4.51 4.51 Total: 0.00 -7.52 299.59 -8.65 -16.17 By element: Atomic # 1 Polarization: -4.69 SS G_CDS: -4.23 Total: -8.92 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -2.27 Total: -0.61 kcal Atomic # 7 Polarization: -0.89 SS G_CDS: -0.42 Total: -1.31 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -1.16 Total: -4.11 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.08 Total: -5.74 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -7.52 -8.65 -16.17 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10970306_13915762.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.584 kcal (2) G-P(sol) polarization free energy of solvation -7.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.101 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds