Wall clock time and date at job start Mon Mar 8 2021 06:44:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45208 * 1 3 3 C 1.34228 * 116.99458 * 2 1 4 4 O 1.20829 * 120.00469 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00120 * 179.97438 * 3 2 1 6 6 H 1.09003 * 112.84193 * 311.19981 * 5 3 2 7 7 C 1.53955 * 113.66694 * 82.43663 * 5 3 2 8 8 C 1.53779 * 87.01756 * 139.93620 * 7 5 3 9 9 H 1.09000 * 113.60922 * 89.23471 * 8 7 5 10 10 N 1.46499 * 113.61334 * 220.04779 * 8 7 5 11 11 C 1.38615 * 120.00055 * 254.13964 * 10 8 7 12 12 N 1.29681 * 124.94756 * 0.02562 * 11 10 8 13 13 C 1.32123 * 116.86476 * 179.97438 * 12 11 10 14 14 C 1.33330 * 114.58096 * 0.02562 * 13 12 11 15 15 C 1.50697 * 125.95409 * 179.97438 * 14 13 12 16 16 O 1.42904 * 109.46844 * 64.99365 * 15 14 13 17 17 Si 1.86296 * 109.47044 * 184.99590 * 15 14 13 18 18 S 1.70962 * 124.94647 * 179.72208 * 11 10 8 19 19 C 1.53773 * 113.61883 * 179.97438 * 5 3 2 20 20 H 1.09001 * 109.46435 * 179.97438 * 1 2 3 21 21 H 1.08997 * 109.47359 * 299.99607 * 1 2 3 22 22 H 1.08997 * 109.47138 * 60.00570 * 1 2 3 23 23 H 1.09001 * 113.61031 * 25.41220 * 7 5 3 24 24 H 1.09000 * 113.66629 * 254.47019 * 7 5 3 25 25 H 0.97004 * 120.00244 * 74.41355 * 10 8 7 26 26 H 1.08000 * 122.71073 * 180.02562 * 13 12 11 27 27 H 1.08996 * 109.47153 * 304.99984 * 15 14 13 28 28 H 0.96704 * 114.00031 * 60.00577 * 16 15 14 29 29 H 1.48505 * 109.99897 * 180.02562 * 17 15 14 30 30 H 1.48505 * 109.99965 * 301.31527 * 17 15 14 31 31 H 1.08995 * 113.61437 * 105.46974 * 19 5 3 32 32 H 1.09009 * 113.61268 * 334.56648 * 19 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2751 0.0006 6 1 4.0233 0.6367 0.7567 7 6 4.1938 1.1219 -1.3969 8 6 5.1814 2.2269 -0.9865 9 1 6.0816 1.8496 -0.5013 10 7 5.4708 3.1829 -2.0582 11 6 6.6913 3.1403 -2.7140 12 7 7.6430 2.2974 -2.4582 13 6 8.7426 2.4003 -3.1835 14 6 8.7180 3.3750 -4.0929 15 6 9.8285 3.7187 -5.0518 16 8 10.0298 2.6313 -5.9569 17 14 9.3695 5.2483 -6.0111 18 16 7.1583 4.1867 -3.9828 19 6 4.1077 2.7144 -0.0001 20 1 -0.3632 -1.0277 -0.0005 21 1 -0.3634 0.5137 0.8900 22 1 -0.3633 0.5137 -0.8900 23 1 3.5270 1.4117 -2.2090 24 1 4.6658 0.1531 -1.5608 25 1 4.8099 3.8482 -2.3062 26 1 9.5926 1.7475 -3.0506 27 1 10.7468 3.9016 -4.4938 28 1 9.2518 2.4124 -6.4880 29 1 10.4564 5.5974 -6.9609 30 1 8.1020 5.0224 -6.7513 31 1 4.5103 3.0299 0.9623 32 1 3.4173 3.4403 -0.4298 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10970306_15704118.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:44:50 Heat of formation + Delta-G solvation = -34.041450 kcal Electronic energy + Delta-G solvation = -18042.666736 eV Core-core repulsion = 14905.117539 eV Total energy + Delta-G solvation = -3137.549197 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.071 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.92223 -40.75999 -39.69943 -37.97207 -37.37443 -35.32940 -31.31440 -29.44094 -27.37736 -26.97665 -26.22792 -24.52084 -22.71628 -21.01628 -20.77891 -19.54173 -18.91473 -18.21442 -17.68862 -17.41939 -17.08435 -16.51393 -16.18972 -16.07076 -15.71273 -15.49344 -14.94706 -14.51797 -14.32362 -13.87171 -13.75916 -13.64511 -13.11703 -12.95172 -12.55108 -12.41765 -12.36741 -12.02968 -11.99045 -11.81673 -11.40311 -11.15174 -10.89436 -10.25911 -10.20512 -8.77717 -5.04563 -0.04322 0.02253 0.68806 1.11931 1.25037 1.54917 1.63177 1.90722 2.01551 2.15030 3.12627 3.20106 3.34758 3.52925 3.58697 3.71251 3.92998 3.93546 4.13273 4.20774 4.33478 4.44393 4.50572 4.53788 4.56399 4.68580 4.74450 4.76528 4.90484 5.19063 5.35234 5.79870 6.00254 6.35803 6.69518 6.98498 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.135 4.135 8 C 0.143 3.857 9 H 0.126 0.874 10 N -0.682 5.682 11 C 0.325 3.675 12 N -0.550 5.550 13 C 0.120 3.880 14 C -0.305 4.305 15 C -0.017 4.017 16 O -0.526 6.526 17 Si 0.653 3.347 18 S 0.089 5.911 19 C -0.128 4.128 20 H 0.103 0.897 21 H 0.064 0.936 22 H 0.063 0.937 23 H 0.090 0.910 24 H 0.090 0.910 25 H 0.416 0.584 26 H 0.176 0.824 27 H 0.126 0.874 28 H 0.376 0.624 29 H -0.238 1.238 30 H -0.243 1.243 31 H 0.090 0.910 32 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.257 0.629 1.242 1.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.393 6.393 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.174 4.174 8 C 0.036 3.964 9 H 0.144 0.856 10 N -0.320 5.320 11 C -0.045 4.045 12 N -0.275 5.275 13 C -0.031 4.031 14 C -0.427 4.427 15 C -0.131 4.131 16 O -0.333 6.333 17 Si 0.552 3.448 18 S 0.339 5.661 19 C -0.166 4.166 20 H 0.122 0.878 21 H 0.083 0.917 22 H 0.082 0.918 23 H 0.109 0.891 24 H 0.109 0.891 25 H 0.254 0.746 26 H 0.193 0.807 27 H 0.143 0.857 28 H 0.224 0.776 29 H -0.161 1.161 30 H -0.167 1.167 31 H 0.109 0.891 32 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -1.629 1.609 0.716 2.399 hybrid contribution -0.279 -1.358 -0.336 1.426 sum -1.908 0.251 0.380 1.961 Atomic orbital electron populations 1.23329 0.75898 1.04050 1.02706 1.86523 1.23746 1.33246 1.83747 1.23473 0.91580 0.81435 0.72045 1.90685 1.66996 1.36440 1.45144 1.22322 0.87701 1.00931 1.01876 0.84991 1.23539 0.98041 1.01384 0.94481 1.22482 0.97746 0.88998 0.87209 0.85645 1.44039 1.12597 1.37512 1.37892 1.23754 0.91357 0.94614 0.94793 1.66473 1.01769 1.27468 1.31772 1.21340 0.95265 0.96200 0.90317 1.25527 1.00103 1.06605 1.10481 1.24072 0.98148 0.98173 0.92663 1.86620 1.40883 1.51110 1.54659 0.95164 0.81707 0.82421 0.85475 1.84083 1.11931 1.36350 1.33759 1.23399 0.97174 0.94996 1.01024 0.87817 0.91687 0.91787 0.89137 0.89127 0.74596 0.80666 0.85665 0.77579 1.16109 1.16747 0.89117 0.87889 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.41 10.57 -39.25 -0.41 -0.82 16 3 C 0.47 0.61 7.49 36.01 0.27 0.88 16 4 O -0.51 -2.01 15.65 -18.75 -0.29 -2.30 16 5 C -0.11 0.18 4.26 -90.87 -0.39 -0.21 16 6 H 0.13 -0.44 8.14 -51.93 -0.42 -0.87 16 7 C -0.13 0.24 7.44 -25.83 -0.19 0.05 16 8 C 0.14 -0.25 4.33 -67.14 -0.29 -0.54 16 9 H 0.13 -0.13 7.70 -51.93 -0.40 -0.53 16 10 N -0.68 0.85 5.52 -55.02 -0.30 0.54 16 11 C 0.33 0.25 8.09 -87.68 -0.71 -0.46 16 12 N -0.55 -1.24 9.85 -15.21 -0.15 -1.39 16 13 C 0.12 0.17 11.24 -19.14 -0.22 -0.05 16 14 C -0.30 -0.13 5.73 -36.02 -0.21 -0.34 16 15 C -0.02 0.00 2.99 36.00 0.11 0.11 16 16 O -0.53 -0.54 12.88 -35.23 -0.45 -0.99 16 17 Si 0.65 -0.45 31.07 -169.99 -5.28 -5.73 16 18 S 0.09 -0.02 20.59 -107.50 -2.21 -2.23 16 19 C -0.13 0.28 7.15 -25.95 -0.19 0.09 16 20 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 21 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 22 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 23 H 0.09 -0.11 8.10 -51.93 -0.42 -0.53 16 24 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 25 H 0.42 -1.23 8.83 -40.82 -0.36 -1.59 16 26 H 0.18 0.04 8.06 -52.49 -0.42 -0.38 16 27 H 0.13 -0.16 7.96 -51.93 -0.41 -0.57 16 28 H 0.38 -0.58 8.70 45.56 0.40 -0.18 16 29 H -0.24 -0.48 7.11 56.52 0.40 -0.08 16 30 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 31 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 32 H 0.10 -0.14 7.40 -51.92 -0.38 -0.52 16 LS Contribution 295.19 15.07 4.45 4.45 Total: 0.00 -6.86 295.19 -9.14 -16.00 By element: Atomic # 1 Polarization: -4.35 SS G_CDS: -3.74 Total: -8.08 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -0.74 Total: 0.57 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.45 Total: -0.85 kcal Atomic # 8 Polarization: -2.96 SS G_CDS: -1.16 Total: -4.12 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.28 Total: -5.73 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.21 Total: -2.23 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -6.86 -9.14 -16.00 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10970306_15704118.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.041 kcal (2) G-P(sol) polarization free energy of solvation -6.858 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.000 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds