Wall clock time and date at job start Mon Mar 8 2021 06:44:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34227 * 117.00001 * 2 1 4 4 O 1.20823 * 120.00133 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00086 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.84830 * 50.33340 * 5 3 2 7 7 C 1.53777 * 113.61594 * 181.53307 * 5 3 2 8 8 C 1.53782 * 87.08374 * 140.06436 * 7 5 3 9 9 H 1.09000 * 113.61477 * 89.19841 * 8 7 5 10 10 N 1.46491 * 113.61715 * 220.01949 * 8 7 5 11 11 C 1.38615 * 120.00223 * 204.99811 * 10 8 7 12 12 N 1.29685 * 124.95030 * 179.97438 * 11 10 8 13 13 C 1.32123 * 116.86602 * 179.97438 * 12 11 10 14 14 C 1.50700 * 122.71058 * 179.97438 * 13 12 11 15 15 O 1.42908 * 109.46940 * 224.30931 * 14 13 12 16 16 Si 1.86292 * 109.47175 * 344.31250 * 14 13 12 17 17 C 1.33334 * 114.57777 * 0.02562 * 13 12 11 18 18 C 1.50701 * 125.95078 * 180.02562 * 17 13 12 19 19 S 1.70966 * 124.94460 * 359.69841 * 11 10 8 20 20 C 1.53786 * 113.61570 * 279.14299 * 5 3 2 21 21 H 1.08995 * 109.47447 * 179.97438 * 1 2 3 22 22 H 1.09005 * 109.47235 * 299.99933 * 1 2 3 23 23 H 1.09006 * 109.47548 * 59.99747 * 1 2 3 24 24 H 1.08994 * 113.61587 * 254.61263 * 7 5 3 25 25 H 1.08998 * 113.61661 * 25.52176 * 7 5 3 26 26 H 0.96998 * 120.00210 * 24.99718 * 10 8 7 27 27 H 1.09000 * 109.46739 * 104.31522 * 14 13 12 28 28 H 0.96693 * 113.99627 * 60.00095 * 15 14 13 29 29 H 1.48494 * 110.00198 * 58.68055 * 16 14 13 30 30 H 1.48504 * 110.00230 * 180.02562 * 16 14 13 31 31 H 1.09007 * 109.47020 * 84.36676 * 18 17 13 32 32 H 1.08991 * 109.47476 * 204.36313 * 18 17 13 33 33 H 1.08996 * 109.46863 * 324.36729 * 18 17 13 34 34 H 1.09002 * 113.61421 * 334.47949 * 20 5 3 35 35 H 1.08996 * 113.61539 * 105.38336 * 20 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0228 0.6566 -0.7723 7 6 4.1077 2.7137 0.0382 8 6 5.1834 2.1999 1.0097 9 1 6.0826 1.8358 0.5128 10 7 5.4750 3.1267 2.1060 11 6 6.7085 3.0877 2.7370 12 7 7.0680 3.8610 3.7141 13 6 8.2847 3.6851 4.1983 14 6 8.8373 4.5101 5.3318 15 8 10.1765 4.9038 5.0257 16 14 7.7823 6.0274 5.5673 17 6 8.9844 2.7193 3.6021 18 6 10.3911 2.3035 3.9480 19 16 7.9754 2.0087 2.3450 20 6 4.1927 1.0838 1.3920 21 1 -0.3634 -1.0276 -0.0005 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5139 -0.8900 24 1 4.5085 3.0545 -0.9164 25 1 3.4184 3.4280 0.4883 26 1 4.8049 3.7678 2.3904 27 1 8.8327 3.9187 6.2474 28 1 10.2563 5.4344 4.2213 29 1 6.3803 5.6317 5.8548 30 1 8.3172 6.8499 6.6821 31 1 10.3672 1.5940 4.7752 32 1 10.8551 1.8346 3.0804 33 1 10.9682 3.1813 4.2387 34 1 3.5264 1.3534 2.2115 35 1 4.6619 0.1097 1.5296 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10970306_15704122.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:44:52 Heat of formation + Delta-G solvation = -37.858999 kcal Electronic energy + Delta-G solvation = -19987.465720 eV Core-core repulsion = 16694.213362 eV Total energy + Delta-G solvation = -3293.252358 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.087 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.98843 -41.00933 -39.97275 -37.76741 -37.39580 -35.43152 -32.61131 -29.68933 -29.01143 -27.09742 -26.88312 -25.56461 -24.30609 -22.72266 -21.26122 -20.19640 -19.44866 -18.64985 -18.01391 -17.68083 -17.46789 -17.35927 -16.62916 -16.37399 -15.99737 -15.56192 -15.39259 -14.67892 -14.44280 -14.16583 -14.10594 -13.85805 -13.72306 -13.58013 -13.32668 -13.14864 -12.78048 -12.76875 -12.45382 -12.17607 -12.07494 -11.85162 -11.83064 -11.46361 -11.00613 -10.55975 -10.30725 -10.00534 -8.65763 -4.77347 0.01722 0.16664 0.77154 1.06979 1.46431 1.51787 1.86335 1.93453 1.99502 2.25520 2.99134 3.05471 3.33090 3.41742 3.48299 3.54437 3.83958 4.04030 4.10607 4.18208 4.19032 4.31203 4.37963 4.40484 4.52103 4.54739 4.57477 4.64379 4.78222 4.82480 4.92814 5.14029 5.30822 5.33953 5.55902 6.22724 6.51463 6.64693 6.95349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.503 6.503 5 C -0.109 4.109 6 H 0.134 0.866 7 C -0.122 4.122 8 C 0.130 3.870 9 H 0.116 0.884 10 N -0.683 5.683 11 C 0.318 3.682 12 N -0.541 5.541 13 C 0.062 3.938 14 C -0.035 4.035 15 O -0.535 6.535 16 Si 0.722 3.278 17 C -0.229 4.229 18 C -0.078 4.078 19 S 0.099 5.901 20 C -0.137 4.137 21 H 0.104 0.896 22 H 0.064 0.936 23 H 0.065 0.935 24 H 0.093 0.907 25 H 0.107 0.893 26 H 0.415 0.585 27 H 0.119 0.881 28 H 0.380 0.620 29 H -0.257 1.257 30 H -0.264 1.264 31 H 0.068 0.932 32 H 0.062 0.938 33 H 0.101 0.899 34 H 0.096 0.904 35 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.548 -2.412 -4.127 4.812 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.390 6.390 5 C -0.128 4.128 6 H 0.152 0.848 7 C -0.160 4.160 8 C 0.024 3.976 9 H 0.134 0.866 10 N -0.323 5.323 11 C -0.054 4.054 12 N -0.268 5.268 13 C -0.068 4.068 14 C -0.148 4.148 15 O -0.340 6.340 16 Si 0.623 3.377 17 C -0.351 4.351 18 C -0.138 4.138 19 S 0.348 5.652 20 C -0.177 4.177 21 H 0.122 0.878 22 H 0.083 0.917 23 H 0.083 0.917 24 H 0.111 0.889 25 H 0.125 0.875 26 H 0.254 0.746 27 H 0.136 0.864 28 H 0.227 0.773 29 H -0.182 1.182 30 H -0.190 1.190 31 H 0.086 0.914 32 H 0.081 0.919 33 H 0.119 0.881 34 H 0.114 0.886 35 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.363 -2.529 -3.718 4.511 hybrid contribution -0.358 -0.055 0.728 0.813 sum -0.721 -2.583 -2.990 4.016 Atomic orbital electron populations 1.23337 0.75791 1.04089 1.02761 1.86511 1.23822 1.33176 1.83752 1.23401 0.91498 0.81504 0.72202 1.90698 1.66943 1.36423 1.44937 1.22290 0.88017 1.00838 1.01673 0.84841 1.23361 0.96774 0.95116 1.00776 1.22605 0.97779 0.89994 0.87216 0.86617 1.43907 1.11614 1.40481 1.36249 1.23292 0.92666 0.95331 0.94068 1.65897 1.17345 1.29451 1.14075 1.20092 0.88883 0.97861 0.99960 1.24564 0.89345 1.05565 0.95305 1.86453 1.25082 1.73801 1.48655 0.93737 0.77955 0.80025 0.85939 1.25178 1.03253 1.03640 1.03078 1.20357 0.89029 1.03193 1.01188 1.83926 1.06409 1.37293 1.37590 1.23616 0.98128 1.00838 0.95100 0.87777 0.91741 0.91659 0.88850 0.87484 0.74629 0.86421 0.77252 1.18168 1.19022 0.91361 0.91907 0.88091 0.88578 0.88902 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.22 10.57 -39.25 -0.41 -0.63 16 3 C 0.47 0.35 7.48 36.00 0.27 0.62 16 4 O -0.50 -1.85 15.66 -18.75 -0.29 -2.15 16 5 C -0.11 0.28 4.25 -90.96 -0.39 -0.10 16 6 H 0.13 -0.62 8.14 -51.93 -0.42 -1.05 16 7 C -0.12 0.35 7.15 -25.92 -0.19 0.16 16 8 C 0.13 -0.38 4.23 -66.98 -0.28 -0.66 16 9 H 0.12 -0.44 7.06 -51.93 -0.37 -0.80 16 10 N -0.68 0.62 5.51 -54.86 -0.30 0.31 16 11 C 0.32 0.40 8.24 -87.68 -0.72 -0.33 16 12 N -0.54 -1.54 8.61 -11.36 -0.10 -1.64 16 13 C 0.06 0.13 6.00 -84.18 -0.50 -0.37 16 14 C -0.03 -0.04 2.74 36.01 0.10 0.06 16 15 O -0.54 -0.06 10.22 -35.23 -0.36 -0.42 16 16 Si 0.72 0.94 31.88 -169.99 -5.42 -4.48 16 17 C -0.23 -0.32 6.49 -36.02 -0.23 -0.55 16 18 C -0.08 0.00 9.97 36.01 0.36 0.36 16 19 S 0.10 0.02 21.69 -107.50 -2.33 -2.31 16 20 C -0.14 0.39 7.45 -25.77 -0.19 0.20 16 21 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 22 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 23 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 24 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 25 H 0.11 -0.16 7.43 -51.93 -0.39 -0.55 16 26 H 0.41 -0.47 8.85 -40.82 -0.36 -0.84 16 27 H 0.12 0.17 7.96 -51.93 -0.41 -0.24 16 28 H 0.38 -1.25 8.70 45.56 0.40 -0.85 16 29 H -0.26 -1.24 7.11 56.52 0.40 -0.84 16 30 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 31 H 0.07 0.01 8.14 -51.92 -0.42 -0.42 16 32 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.10 -0.01 5.67 -51.93 -0.29 -0.30 16 34 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 35 H 0.09 -0.33 8.14 -51.93 -0.42 -0.76 16 LS Contribution 311.79 15.07 4.70 4.70 Total: 0.00 -7.35 311.79 -9.66 -17.01 By element: Atomic # 1 Polarization: -6.38 SS G_CDS: -4.42 Total: -10.80 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -0.71 Total: 0.41 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -0.40 Total: -1.33 kcal Atomic # 8 Polarization: -2.13 SS G_CDS: -1.07 Total: -3.20 kcal Atomic # 14 Polarization: 0.94 SS G_CDS: -5.42 Total: -4.48 kcal Atomic # 16 Polarization: 0.02 SS G_CDS: -2.33 Total: -2.31 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -7.35 -9.66 -17.01 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10970306_15704122.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.846 kcal (2) G-P(sol) polarization free energy of solvation -7.353 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.660 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.859 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds