Wall clock time and date at job start Mon Mar 8 2021 06:44:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34230 * 117.00122 * 2 1 4 4 O 1.20820 * 119.99842 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99521 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.85197 * 48.80566 * 5 3 2 7 7 C 1.53787 * 113.60869 * 179.97438 * 5 3 2 8 8 C 1.53784 * 87.07923 * 139.98154 * 7 5 3 9 9 H 1.09002 * 113.61478 * 89.11632 * 8 7 5 10 10 N 1.46497 * 113.61569 * 220.01663 * 8 7 5 11 11 C 1.39138 * 120.00539 * 205.00168 * 10 8 7 12 12 N 1.32340 * 119.71280 * 359.71997 * 11 10 8 13 13 C 1.32009 * 121.64425 * 179.75322 * 12 11 10 14 14 C 1.37985 * 120.90081 * 0.52809 * 13 12 11 15 15 C 1.50697 * 120.32789 * 179.75992 * 14 13 12 16 16 O 1.42900 * 109.47602 * 244.98289 * 15 14 13 17 17 Si 1.86299 * 109.47329 * 4.98458 * 15 14 13 18 18 C 1.38904 * 119.34900 * 359.74709 * 14 13 12 19 19 C 1.38450 * 118.48224 * 359.97438 * 18 14 13 20 20 F 1.35098 * 120.47037 * 179.97438 * 19 18 14 21 21 C 1.53779 * 87.08045 * 334.56667 * 8 7 5 22 22 H 1.08998 * 109.46821 * 300.00305 * 1 2 3 23 23 H 1.08999 * 109.46775 * 59.99544 * 1 2 3 24 24 H 1.08994 * 109.47474 * 180.02562 * 1 2 3 25 25 H 1.09004 * 113.61202 * 254.52907 * 7 5 3 26 26 H 1.08994 * 113.61447 * 25.43338 * 7 5 3 27 27 H 0.97009 * 119.99534 * 24.99936 * 10 8 7 28 28 H 1.07999 * 119.55058 * 180.27042 * 13 12 11 29 29 H 1.09009 * 109.47091 * 124.97879 * 15 14 13 30 30 H 0.96697 * 114.00100 * 59.99847 * 16 15 14 31 31 H 1.48502 * 110.00176 * 58.67521 * 17 15 14 32 32 H 1.48500 * 110.00453 * 179.97438 * 17 15 14 33 33 H 1.07998 * 120.76267 * 179.97438 * 18 14 13 34 34 H 1.09006 * 113.61307 * 270.88660 * 21 8 7 35 35 H 1.09007 * 113.61642 * 139.98417 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 1 4.0234 0.6363 -0.7567 7 6 4.1079 2.7141 -0.0011 8 6 5.1816 2.2269 0.9862 9 1 6.0812 1.8481 0.5011 10 7 5.4711 3.1833 2.0574 11 6 6.7081 3.1615 2.6941 12 7 7.6170 2.2706 2.3312 13 6 8.8042 2.2190 2.9060 14 6 9.1387 3.0919 3.9210 15 6 10.4959 3.0179 4.5718 16 8 10.3474 2.6396 5.9417 17 14 11.5404 1.7534 3.6881 18 6 8.2123 4.0396 4.3368 19 6 6.9773 4.0742 3.7120 20 9 6.0460 4.9791 4.0848 21 6 4.1917 1.1237 1.3962 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 4.5106 3.0287 -0.9640 26 1 3.4176 3.4404 0.4278 27 1 4.8003 3.8319 2.3228 28 1 9.5220 1.4808 2.5802 29 1 10.9800 3.9929 4.5145 30 1 9.9230 1.7800 6.0686 31 1 11.6760 2.1185 2.2550 32 1 12.8817 1.6713 4.3199 33 1 8.4499 4.7337 5.1293 34 1 3.5243 1.4153 2.2072 35 1 4.6621 0.1544 1.5616 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_10970306_17656566.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:44:54 Heat of formation + Delta-G solvation = -86.024841 kcal Electronic energy + Delta-G solvation = -21762.028392 eV Core-core repulsion = 18063.618803 eV Total energy + Delta-G solvation = -3698.409588 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.105 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -49.87941 -41.93843 -41.36110 -39.78612 -37.99553 -37.34531 -35.52514 -33.23024 -31.42587 -29.34714 -27.29331 -26.93675 -26.15872 -24.84294 -23.04848 -22.20494 -20.83956 -19.25269 -19.13671 -18.45377 -18.25139 -17.73255 -17.47458 -17.33715 -16.96939 -16.44565 -16.12665 -15.85441 -15.77381 -15.38347 -14.98543 -14.42818 -14.33718 -14.27660 -14.06141 -13.71769 -13.63287 -13.52676 -13.08728 -12.65776 -12.47260 -12.36503 -12.11161 -12.02407 -11.79658 -11.37838 -11.24243 -10.71444 -10.68765 -10.48221 -8.81178 -5.10877 -0.09355 0.09060 1.14668 1.20644 1.56782 1.60814 1.92300 2.01287 2.51397 3.02599 3.15951 3.21888 3.27203 3.39446 3.56426 3.59583 3.68153 3.81235 3.92014 3.99627 4.15134 4.22541 4.36665 4.37844 4.45076 4.49133 4.55313 4.58293 4.66790 4.73356 4.79071 4.95448 5.02871 5.36714 5.39515 5.89721 6.12955 6.50855 6.72083 6.90411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.471 3.529 4 O -0.505 6.505 5 C -0.108 4.108 6 H 0.132 0.868 7 C -0.130 4.130 8 C 0.139 3.861 9 H 0.128 0.872 10 N -0.706 5.706 11 C 0.390 3.610 12 N -0.511 5.511 13 C 0.149 3.851 14 C -0.209 4.209 15 C -0.055 4.055 16 O -0.540 6.540 17 Si 0.685 3.315 18 C -0.037 4.037 19 C -0.019 4.019 20 F -0.133 7.133 21 C -0.135 4.135 22 H 0.063 0.937 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.088 0.912 26 H 0.101 0.899 27 H 0.414 0.586 28 H 0.164 0.836 29 H 0.115 0.885 30 H 0.380 0.620 31 H -0.254 1.254 32 H -0.252 1.252 33 H 0.149 0.851 34 H 0.089 0.911 35 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.397 -4.350 -0.803 4.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.392 6.392 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.168 4.168 8 C 0.034 3.966 9 H 0.146 0.854 10 N -0.338 5.338 11 C 0.152 3.848 12 N -0.228 5.228 13 C -0.008 4.008 14 C -0.214 4.214 15 C -0.167 4.167 16 O -0.345 6.345 17 Si 0.586 3.414 18 C -0.064 4.064 19 C -0.045 4.045 20 F -0.112 7.112 21 C -0.174 4.174 22 H 0.082 0.918 23 H 0.083 0.917 24 H 0.122 0.878 25 H 0.107 0.893 26 H 0.120 0.880 27 H 0.252 0.748 28 H 0.180 0.820 29 H 0.133 0.867 30 H 0.227 0.773 31 H -0.178 1.178 32 H -0.176 1.176 33 H 0.167 0.833 34 H 0.108 0.892 35 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 0.913 -4.305 -1.966 4.820 hybrid contribution -0.825 1.685 0.856 2.062 sum 0.088 -2.620 -1.110 2.847 Atomic orbital electron populations 1.23324 0.75938 1.04025 1.02700 1.86519 1.23715 1.33269 1.83781 1.23497 0.91622 0.81425 0.72055 1.90686 1.67000 1.36466 1.45098 1.22298 0.87643 1.00952 1.01904 0.85005 1.23425 0.97382 0.94970 1.01054 1.22427 0.97691 0.89043 0.87457 0.85398 1.44553 1.12429 1.38432 1.38350 1.18440 0.87783 0.89695 0.88846 1.67261 1.02448 1.22720 1.30377 1.22314 0.91899 0.95638 0.90960 1.20937 0.98846 1.00019 1.01627 1.24868 0.96949 1.07405 0.87462 1.86518 1.83459 1.41856 1.22714 0.94900 0.80837 0.86919 0.78739 1.21297 0.90266 0.97239 0.97564 1.18011 0.89869 0.94930 1.01728 1.91499 1.63900 1.65044 1.90752 1.23501 0.98110 1.01365 0.94434 0.91796 0.91724 0.87814 0.89293 0.88026 0.74802 0.81962 0.86740 0.77289 1.17823 1.17620 0.83318 0.89226 0.89088 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.43 10.57 -39.26 -0.41 -0.85 16 3 C 0.47 0.72 7.48 36.01 0.27 0.99 16 4 O -0.51 -2.24 15.65 -18.75 -0.29 -2.54 16 5 C -0.11 0.17 4.26 -90.96 -0.39 -0.22 16 6 H 0.13 -0.45 8.14 -51.93 -0.42 -0.88 16 7 C -0.13 0.21 7.16 -25.91 -0.19 0.02 16 8 C 0.14 -0.22 4.27 -67.12 -0.29 -0.51 16 9 H 0.13 -0.20 7.41 -51.93 -0.38 -0.59 16 10 N -0.71 0.28 5.51 -53.06 -0.29 -0.01 16 11 C 0.39 0.39 7.49 -154.86 -1.16 -0.77 16 12 N -0.51 -0.36 9.13 -12.37 -0.11 -0.47 16 13 C 0.15 -0.12 9.84 -17.57 -0.17 -0.30 16 14 C -0.21 0.15 5.36 -104.47 -0.56 -0.41 16 15 C -0.06 0.08 2.82 36.00 0.10 0.18 16 16 O -0.54 0.42 12.84 -35.23 -0.45 -0.04 16 17 Si 0.68 -1.59 29.83 -169.99 -5.07 -6.66 16 18 C -0.04 -0.01 9.82 -39.26 -0.39 -0.40 16 19 C -0.02 -0.03 7.35 -39.09 -0.29 -0.31 16 20 F -0.13 -0.29 16.65 2.25 0.04 -0.25 16 21 C -0.13 0.24 7.43 -25.92 -0.19 0.05 16 22 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 24 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 25 H 0.09 -0.20 8.14 -51.93 -0.42 -0.63 16 26 H 0.10 -0.03 7.41 -51.93 -0.38 -0.42 16 27 H 0.41 -0.39 8.20 -40.82 -0.33 -0.73 16 28 H 0.16 -0.54 4.91 -52.49 -0.26 -0.80 16 29 H 0.12 -0.12 7.96 -51.92 -0.41 -0.53 16 30 H 0.38 -1.75 8.70 45.56 0.40 -1.35 16 31 H -0.25 0.02 7.11 56.52 0.40 0.42 16 32 H -0.25 -0.29 7.11 56.52 0.40 0.12 16 33 H 0.15 -0.05 8.06 -52.49 -0.42 -0.48 16 34 H 0.09 -0.08 8.09 -51.93 -0.42 -0.50 16 35 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 LS Contribution 307.79 15.07 4.64 4.64 Total: 0.00 -7.36 307.79 -8.10 -15.46 By element: Atomic # 1 Polarization: -4.69 SS G_CDS: -3.96 Total: -8.65 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: -2.18 Total: -0.63 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.41 Total: -0.48 kcal Atomic # 8 Polarization: -2.26 SS G_CDS: -1.16 Total: -3.42 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.07 Total: -6.66 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -7.36 -8.10 -15.46 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10970306_17656566.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.567 kcal (2) G-P(sol) polarization free energy of solvation -7.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.096 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.458 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds