Wall clock time and date at job start Mon Mar 8 2021 06:44:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34230 * 117.00122 * 2 1 4 4 O 1.20820 * 119.99842 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99521 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.85197 * 48.80566 * 5 3 2 7 7 C 1.53787 * 113.60869 * 179.97438 * 5 3 2 8 8 C 1.53784 * 87.07923 * 139.98154 * 7 5 3 9 9 H 1.09002 * 113.61478 * 89.11632 * 8 7 5 10 10 N 1.46497 * 113.61569 * 220.01663 * 8 7 5 11 11 C 1.39138 * 120.00539 * 205.00168 * 10 8 7 12 12 N 1.32340 * 119.71280 * 359.71997 * 11 10 8 13 13 C 1.32009 * 121.64425 * 179.75322 * 12 11 10 14 14 C 1.37985 * 120.90081 * 0.52809 * 13 12 11 15 15 C 1.50697 * 120.32789 * 179.75992 * 14 13 12 16 16 O 1.42900 * 109.47602 * 244.98289 * 15 14 13 17 17 Si 1.86299 * 109.47329 * 4.98458 * 15 14 13 18 18 C 1.38904 * 119.34900 * 359.74709 * 14 13 12 19 19 C 1.38450 * 118.48224 * 359.97438 * 18 14 13 20 20 F 1.35098 * 120.47037 * 179.97438 * 19 18 14 21 21 C 1.53779 * 87.08045 * 334.56667 * 8 7 5 22 22 H 1.08998 * 109.46821 * 300.00305 * 1 2 3 23 23 H 1.08999 * 109.46775 * 59.99544 * 1 2 3 24 24 H 1.08994 * 109.47474 * 180.02562 * 1 2 3 25 25 H 1.09004 * 113.61202 * 254.52907 * 7 5 3 26 26 H 1.08994 * 113.61447 * 25.43338 * 7 5 3 27 27 H 0.97009 * 119.99534 * 24.99936 * 10 8 7 28 28 H 1.07999 * 119.55058 * 180.27042 * 13 12 11 29 29 H 1.09009 * 109.47091 * 124.97879 * 15 14 13 30 30 H 0.96697 * 114.00100 * 59.99847 * 16 15 14 31 31 H 1.48502 * 110.00176 * 58.67521 * 17 15 14 32 32 H 1.48500 * 110.00453 * 179.97438 * 17 15 14 33 33 H 1.07998 * 120.76267 * 179.97438 * 18 14 13 34 34 H 1.09006 * 113.61307 * 270.88660 * 21 8 7 35 35 H 1.09007 * 113.61642 * 139.98417 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 1 4.0234 0.6363 -0.7567 7 6 4.1079 2.7141 -0.0011 8 6 5.1816 2.2269 0.9862 9 1 6.0812 1.8481 0.5011 10 7 5.4711 3.1833 2.0574 11 6 6.7081 3.1615 2.6941 12 7 7.6170 2.2706 2.3312 13 6 8.8042 2.2190 2.9060 14 6 9.1387 3.0919 3.9210 15 6 10.4959 3.0179 4.5718 16 8 10.3474 2.6396 5.9417 17 14 11.5404 1.7534 3.6881 18 6 8.2123 4.0396 4.3368 19 6 6.9773 4.0742 3.7120 20 9 6.0460 4.9791 4.0848 21 6 4.1917 1.1237 1.3962 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 4.5106 3.0287 -0.9640 26 1 3.4176 3.4404 0.4278 27 1 4.8003 3.8319 2.3228 28 1 9.5220 1.4808 2.5802 29 1 10.9800 3.9929 4.5145 30 1 9.9230 1.7800 6.0686 31 1 11.6760 2.1185 2.2550 32 1 12.8817 1.6713 4.3199 33 1 8.4499 4.7337 5.1293 34 1 3.5243 1.4153 2.2072 35 1 4.6621 0.1544 1.5616 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_10970306_17656566.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:44:54 Heat of formation + Delta-G solvation = -84.133090 kcal Electronic energy + Delta-G solvation = -21761.946359 eV Core-core repulsion = 18063.618803 eV Total energy + Delta-G solvation = -3698.327556 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.105 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -49.96873 -41.96757 -41.35852 -39.74081 -37.92449 -37.45933 -35.47996 -33.21484 -31.39090 -29.32671 -27.23401 -26.81398 -26.09327 -24.83922 -23.02814 -22.20508 -20.78007 -19.21619 -19.14366 -18.45246 -18.28033 -17.74513 -17.49137 -17.36092 -17.01492 -16.34464 -16.05477 -15.78140 -15.74501 -15.38056 -14.97032 -14.43263 -14.32944 -14.29925 -14.07272 -13.64269 -13.56915 -13.49674 -13.04910 -12.57378 -12.37475 -12.29767 -12.12080 -11.96804 -11.86508 -11.40594 -11.18620 -10.70609 -10.68050 -10.39724 -8.78320 -4.94752 -0.08131 0.09502 1.05415 1.34262 1.63540 1.69810 2.03700 2.05749 2.53228 3.02670 3.24761 3.29729 3.37027 3.51208 3.68600 3.71871 3.77897 3.86767 3.97993 4.05915 4.24772 4.26678 4.43530 4.47451 4.55297 4.60108 4.65230 4.67236 4.73435 4.86896 4.94298 4.99525 5.11841 5.32473 5.44215 5.96195 6.15908 6.63759 6.81331 6.92322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.469 3.531 4 O -0.541 6.541 5 C -0.103 4.103 6 H 0.158 0.842 7 C -0.128 4.128 8 C 0.144 3.856 9 H 0.134 0.866 10 N -0.706 5.706 11 C 0.383 3.617 12 N -0.519 5.519 13 C 0.151 3.849 14 C -0.206 4.206 15 C -0.061 4.061 16 O -0.557 6.557 17 Si 0.778 3.222 18 C -0.042 4.042 19 C -0.040 4.040 20 F -0.143 7.143 21 C -0.129 4.129 22 H 0.059 0.941 23 H 0.061 0.939 24 H 0.129 0.871 25 H 0.098 0.902 26 H 0.086 0.914 27 H 0.414 0.586 28 H 0.189 0.811 29 H 0.109 0.891 30 H 0.396 0.604 31 H -0.278 1.278 32 H -0.300 1.300 33 H 0.151 0.849 34 H 0.078 0.922 35 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.001 -5.585 -1.215 5.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.314 3.686 4 O -0.431 6.431 5 C -0.122 4.122 6 H 0.175 0.825 7 C -0.167 4.167 8 C 0.039 3.961 9 H 0.152 0.848 10 N -0.337 5.337 11 C 0.145 3.855 12 N -0.236 5.236 13 C -0.006 4.006 14 C -0.212 4.212 15 C -0.171 4.171 16 O -0.365 6.365 17 Si 0.683 3.317 18 C -0.068 4.068 19 C -0.067 4.067 20 F -0.122 7.122 21 C -0.168 4.168 22 H 0.077 0.923 23 H 0.079 0.921 24 H 0.147 0.853 25 H 0.117 0.883 26 H 0.104 0.896 27 H 0.252 0.748 28 H 0.205 0.795 29 H 0.127 0.873 30 H 0.246 0.754 31 H -0.205 1.205 32 H -0.227 1.227 33 H 0.169 0.831 34 H 0.096 0.904 35 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 1.477 -5.558 -2.372 6.221 hybrid contribution -0.990 2.064 1.016 2.504 sum 0.487 -3.494 -1.356 3.779 Atomic orbital electron populations 1.23519 0.75155 1.05614 1.02337 1.86521 1.24657 1.33121 1.83459 1.24111 0.92725 0.80962 0.70834 1.90669 1.68011 1.37544 1.46906 1.22447 0.85618 1.01369 1.02771 0.82479 1.23389 0.97055 0.94766 1.01456 1.22452 0.97790 0.88802 0.87083 0.84838 1.44642 1.12099 1.38569 1.38417 1.18565 0.88257 0.89752 0.88900 1.67329 1.02871 1.22729 1.30705 1.22731 0.91813 0.95698 0.90323 1.21001 0.98841 0.99689 1.01623 1.25032 0.96731 1.07862 0.87514 1.86483 1.83762 1.43315 1.22933 0.93836 0.77398 0.84980 0.75458 1.21439 0.90221 0.97564 0.97569 1.18186 0.90230 0.95525 1.02716 1.91465 1.64336 1.65486 1.90951 1.23451 0.97690 1.01800 0.93867 0.92255 0.92056 0.85282 0.88304 0.89589 0.74805 0.79499 0.87334 0.75389 1.20503 1.22748 0.83111 0.90382 0.87931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.90 10.57 -51.41 -0.54 -1.44 16 3 C 0.47 1.66 7.48 71.24 0.53 2.20 16 4 O -0.54 -5.52 15.65 21.98 0.34 -5.18 16 5 C -0.10 0.36 4.26 -11.01 -0.05 0.31 16 6 H 0.16 -1.34 8.14 -2.39 -0.02 -1.36 16 7 C -0.13 0.39 7.16 31.12 0.22 0.61 16 8 C 0.14 -0.50 4.27 45.52 0.19 -0.30 16 9 H 0.13 -0.56 7.41 -2.39 -0.02 -0.58 16 10 N -0.71 0.21 5.51 -321.79 -1.77 -1.56 16 11 C 0.38 0.86 7.49 133.09 1.00 1.86 16 12 N -0.52 -0.39 9.13 -193.04 -1.76 -2.15 16 13 C 0.15 -0.40 9.84 84.61 0.83 0.43 16 14 C -0.21 0.38 5.36 -19.77 -0.11 0.27 16 15 C -0.06 0.20 2.82 71.24 0.20 0.40 16 16 O -0.56 1.13 12.84 -148.98 -1.91 -0.78 16 17 Si 0.78 -4.21 29.83 68.60 2.05 -2.16 16 18 C -0.04 -0.05 9.82 22.48 0.22 0.17 16 19 C -0.04 -0.14 7.35 22.59 0.17 0.02 16 20 F -0.14 -0.83 16.65 44.97 0.75 -0.08 16 21 C -0.13 0.51 7.43 31.12 0.23 0.74 16 22 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 23 H 0.06 -0.03 8.13 -2.39 -0.02 -0.04 16 24 H 0.13 -0.86 8.14 -2.39 -0.02 -0.88 16 25 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 26 H 0.09 0.05 7.41 -2.39 -0.02 0.03 16 27 H 0.41 -0.28 8.20 -92.70 -0.76 -1.04 16 28 H 0.19 -1.61 4.91 -2.91 -0.01 -1.62 16 29 H 0.11 -0.23 7.96 -2.38 -0.02 -0.25 16 30 H 0.40 -4.01 8.70 -74.06 -0.64 -4.65 16 31 H -0.28 0.31 7.11 99.48 0.71 1.02 16 32 H -0.30 -0.83 7.11 99.48 0.71 -0.12 16 33 H 0.15 0.01 8.06 -2.91 -0.02 -0.01 16 34 H 0.08 -0.10 8.09 -2.38 -0.02 -0.12 16 35 H 0.10 -0.61 8.14 -2.38 -0.02 -0.63 16 Total: 0.00 -17.86 307.79 1.57 -16.29 By element: Atomic # 1 Polarization: -10.59 SS G_CDS: -0.22 Total: -10.81 kcal Atomic # 6 Polarization: 3.23 SS G_CDS: 4.64 Total: 7.87 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -3.53 Total: -3.71 kcal Atomic # 8 Polarization: -5.28 SS G_CDS: -2.11 Total: -7.40 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.75 Total: -0.08 kcal Atomic # 14 Polarization: -4.21 SS G_CDS: 2.05 Total: -2.16 kcal Total: -17.86 1.57 -16.29 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_10970306_17656566.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.847 kcal (2) G-P(sol) polarization free energy of solvation -17.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.704 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.286 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds