Wall clock time and date at job start Mon Mar 8 2021 07:22:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52999 * 109.47262 * 2 1 4 4 C 1.53001 * 109.47000 * 240.00101 * 2 1 3 5 5 O 1.42900 * 109.46933 * 120.00099 * 2 1 3 6 6 C 1.42896 * 114.00092 * 59.99942 * 5 2 1 7 7 H 1.09001 * 112.91072 * 341.25463 * 6 5 2 8 8 C 1.53956 * 113.66855 * 112.43952 * 6 5 2 9 9 C 1.53784 * 87.02316 * 139.93537 * 8 6 5 10 10 H 1.08992 * 113.61568 * 89.22914 * 9 8 6 11 11 N 1.46500 * 113.61593 * 220.05058 * 9 8 6 12 12 C 1.38398 * 120.00091 * 254.13479 * 11 9 8 13 13 N 1.32501 * 119.21725 * 0.25057 * 12 11 9 14 14 C 1.32272 * 120.74110 * 180.26714 * 13 12 11 15 15 C 1.38605 * 119.19705 * 359.48581 * 14 13 12 16 16 C 1.50698 * 120.72340 * 180.27714 * 15 14 13 17 17 O 1.42901 * 109.47067 * 300.00497 * 16 15 14 18 18 Si 1.86299 * 109.47500 * 180.02562 * 16 15 14 19 19 C 1.38607 * 118.56029 * 0.25336 * 15 14 13 20 20 N 1.32280 * 119.19188 * 0.02562 * 19 15 14 21 21 C 1.53783 * 113.61730 * 209.99861 * 6 5 2 22 22 H 1.08995 * 109.47046 * 300.00153 * 1 2 3 23 23 H 1.09001 * 109.46909 * 59.99759 * 1 2 3 24 24 H 1.08996 * 109.46968 * 179.97438 * 1 2 3 25 25 H 1.09002 * 109.47200 * 179.97438 * 3 2 1 26 26 H 1.08993 * 109.47166 * 299.99725 * 3 2 1 27 27 H 1.09007 * 109.46830 * 60.00565 * 3 2 1 28 28 H 1.09000 * 109.46778 * 299.99950 * 4 2 1 29 29 H 1.08993 * 109.47469 * 60.00250 * 4 2 1 30 30 H 1.09002 * 109.46740 * 180.02562 * 4 2 1 31 31 H 1.08998 * 113.61324 * 25.41421 * 8 6 5 32 32 H 1.09005 * 113.66619 * 254.45822 * 8 6 5 33 33 H 0.97005 * 119.99715 * 74.12761 * 11 9 8 34 34 H 1.08002 * 120.40454 * 179.76837 * 14 13 12 35 35 H 1.09003 * 109.47317 * 59.99676 * 16 15 14 36 36 H 0.96706 * 113.99828 * 299.99721 * 17 16 15 37 37 H 1.48508 * 109.99863 * 58.68035 * 18 16 15 38 38 H 1.48502 * 110.00117 * 179.97438 * 18 16 15 39 39 H 1.08001 * 120.40449 * 180.02562 * 19 15 14 40 40 H 1.08998 * 113.61157 * 105.46981 * 21 6 5 41 41 H 1.08995 * 113.61413 * 334.56586 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0063 -0.6737 1.1668 6 6 1.5846 -2.0355 1.2645 7 1 0.7241 -2.2595 0.6340 8 6 2.7335 -3.0501 1.1198 9 6 2.0561 -3.8558 2.2409 10 1 1.3244 -4.5779 1.8787 11 7 2.9999 -4.4347 3.2002 12 6 3.2652 -5.7928 3.1765 13 7 2.6606 -6.5543 2.2763 14 6 2.8879 -7.8565 2.2300 15 6 3.7782 -8.4199 3.1306 16 6 4.0674 -9.8986 3.1045 17 8 2.8574 -10.6247 3.3297 18 14 5.2981 -10.3145 4.4399 19 6 4.3972 -7.5936 4.0555 20 7 4.1211 -6.3000 4.0514 21 6 1.4331 -2.5312 2.7123 22 1 -0.3633 0.5138 0.8899 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 3.1300 1.4425 0.0005 26 1 1.6768 1.9563 -0.8899 27 1 1.6767 1.9563 0.8901 28 1 1.6766 -1.7489 -1.2492 29 1 1.6767 -0.2074 -2.1392 30 1 3.1300 -0.7216 -1.2490 31 1 3.7080 -2.6489 1.3981 32 1 2.7449 -3.5640 0.1585 33 1 3.4390 -3.8660 3.8520 34 1 2.3893 -8.4726 1.4964 35 1 4.4791 -10.1713 2.1327 36 1 2.4348 -10.4315 4.1778 37 1 4.7611 -9.9185 5.7666 38 1 5.5913 -11.7702 4.4250 39 1 5.0964 -8.0011 4.7707 40 1 0.3964 -2.6266 3.0349 41 1 2.0515 -1.9878 3.4268 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11572882_12175864.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:22:53 Heat of formation + Delta-G solvation = 7.566227 kcal Electronic energy + Delta-G solvation = -21867.731755 eV Core-core repulsion = 18557.704120 eV Total energy + Delta-G solvation = -3310.027635 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.157 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.08752 -40.89956 -38.81043 -38.03543 -35.49687 -34.64926 -33.70502 -31.92891 -28.50358 -28.41688 -26.93419 -26.68750 -25.93132 -24.66937 -23.04194 -21.18115 -20.82896 -19.20303 -18.97035 -18.10472 -17.62581 -16.83807 -16.58859 -16.25432 -16.05315 -15.97895 -15.63927 -15.52267 -14.92168 -14.53837 -14.50560 -14.19464 -14.00441 -13.53859 -13.36403 -13.26984 -13.15441 -12.93215 -12.77161 -12.72448 -12.36146 -12.21015 -12.07901 -11.87008 -11.82665 -11.69407 -11.33468 -11.20459 -10.71526 -10.40316 -10.00234 -9.07147 -5.02247 0.08496 0.18541 1.22636 1.53230 1.79905 1.92050 2.72482 2.82626 3.18475 3.31931 3.44263 3.52402 3.60637 3.72434 3.79321 3.79746 3.82535 3.85991 3.94012 4.05025 4.22285 4.28048 4.52574 4.53562 4.59505 4.65024 4.71522 4.73260 4.76278 4.78770 4.84983 4.87913 4.95134 4.97704 5.03060 5.11325 5.27144 5.29643 5.35305 5.79810 6.06609 6.33728 6.36208 6.43351 7.32036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.359 6.359 6 C 0.066 3.934 7 H 0.095 0.905 8 C -0.167 4.167 9 C 0.141 3.859 10 H 0.121 0.879 11 N -0.681 5.681 12 C 0.568 3.432 13 N -0.566 5.566 14 C 0.222 3.778 15 C -0.294 4.294 16 C -0.052 4.052 17 O -0.530 6.530 18 Si 0.677 3.323 19 C 0.201 3.799 20 N -0.566 5.566 21 C -0.145 4.145 22 H 0.065 0.935 23 H 0.068 0.932 24 H 0.059 0.941 25 H 0.063 0.937 26 H 0.071 0.929 27 H 0.063 0.937 28 H 0.059 0.941 29 H 0.066 0.934 30 H 0.064 0.936 31 H 0.092 0.908 32 H 0.074 0.926 33 H 0.416 0.584 34 H 0.170 0.830 35 H 0.120 0.880 36 H 0.376 0.624 37 H -0.258 1.258 38 H -0.253 1.253 39 H 0.167 0.833 40 H 0.081 0.919 41 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.193 1.282 -1.413 1.917 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.278 6.278 6 C 0.007 3.993 7 H 0.112 0.888 8 C -0.207 4.207 9 C 0.035 3.965 10 H 0.139 0.861 11 N -0.316 5.316 12 C 0.212 3.788 13 N -0.288 5.288 14 C 0.054 3.946 15 C -0.302 4.302 16 C -0.164 4.164 17 O -0.336 6.336 18 Si 0.578 3.422 19 C 0.033 3.967 20 N -0.287 5.287 21 C -0.183 4.183 22 H 0.084 0.916 23 H 0.087 0.913 24 H 0.078 0.922 25 H 0.082 0.918 26 H 0.090 0.910 27 H 0.082 0.918 28 H 0.078 0.922 29 H 0.085 0.915 30 H 0.083 0.917 31 H 0.111 0.889 32 H 0.093 0.907 33 H 0.254 0.746 34 H 0.187 0.813 35 H 0.138 0.862 36 H 0.223 0.777 37 H -0.182 1.182 38 H -0.178 1.178 39 H 0.183 0.817 40 H 0.099 0.901 41 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.278 1.786 -1.245 2.194 hybrid contribution -0.928 -0.889 0.365 1.336 sum -0.650 0.897 -0.880 1.415 Atomic orbital electron populations 1.22474 0.95594 1.02500 1.03116 1.21549 0.93136 0.93246 0.85473 1.21770 1.02037 0.93186 1.02633 1.22471 1.02322 1.00800 0.97805 1.88033 1.73739 1.23118 1.42943 1.23356 0.97002 0.82037 0.96899 0.88757 1.24104 0.99964 0.96922 0.99670 1.22236 0.91569 0.93406 0.89324 0.86127 1.44143 1.47130 1.02566 1.37796 1.19431 0.86308 0.87297 0.85781 1.67992 1.29014 1.06620 1.25184 1.22849 0.89466 0.89063 0.93226 1.21646 1.06503 0.98881 1.03200 1.24663 0.93477 0.87489 1.10727 1.86607 1.37899 1.67021 1.42093 0.95230 0.85971 0.83685 0.77294 1.22770 0.92925 0.87660 0.93352 1.67913 1.19520 1.14873 1.26437 1.23648 1.02302 0.94982 0.97408 0.91582 0.91320 0.92173 0.91753 0.91026 0.91751 0.92232 0.91499 0.91680 0.88910 0.90699 0.74604 0.81290 0.86212 0.77650 1.18229 1.17769 0.81673 0.90064 0.88519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.16 8.38 37.16 0.31 0.47 16 2 C 0.10 0.00 1.11 -90.62 -0.10 -0.10 16 3 C -0.14 0.06 8.84 37.16 0.33 0.39 16 4 C -0.18 0.11 8.38 37.16 0.31 0.42 16 5 O -0.36 -0.50 10.00 -35.23 -0.35 -0.85 16 6 C 0.07 -0.02 2.82 -25.83 -0.07 -0.10 16 7 H 0.09 -0.12 5.55 -51.93 -0.29 -0.40 16 8 C -0.17 0.02 7.73 -25.83 -0.20 -0.18 16 9 C 0.14 -0.03 4.22 -67.11 -0.28 -0.31 16 10 H 0.12 0.05 7.41 -51.93 -0.38 -0.34 16 11 N -0.68 -0.59 5.51 -55.00 -0.30 -0.90 16 12 C 0.57 1.54 8.43 -322.82 -2.72 -1.18 16 13 N -0.57 -1.43 9.15 -13.93 -0.13 -1.56 16 14 C 0.22 0.20 10.92 -17.23 -0.19 0.01 16 15 C -0.29 0.02 5.40 -104.35 -0.56 -0.55 16 16 C -0.05 0.06 2.85 36.00 0.10 0.17 16 17 O -0.53 -0.11 12.79 -35.23 -0.45 -0.56 16 18 Si 0.68 -1.18 29.87 -169.99 -5.08 -6.25 16 19 C 0.20 0.12 9.92 -17.22 -0.17 -0.05 16 20 N -0.57 -1.52 10.46 -13.93 -0.15 -1.67 16 21 C -0.15 0.13 7.66 -25.92 -0.20 -0.07 16 22 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 23 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 24 H 0.06 -0.08 6.25 -51.93 -0.32 -0.40 16 25 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 27 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.06 -0.05 7.02 -51.93 -0.36 -0.41 16 29 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.09 0.08 8.14 -51.93 -0.42 -0.34 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.42 -0.04 8.83 -40.82 -0.36 -0.40 16 34 H 0.17 -0.15 8.06 -52.49 -0.42 -0.58 16 35 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 36 H 0.38 -0.87 8.70 45.56 0.40 -0.47 16 37 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 38 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 39 H 0.17 -0.31 5.04 -52.49 -0.26 -0.57 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.10 -0.06 8.11 -51.93 -0.42 -0.48 16 LS Contribution 332.99 15.07 5.02 5.02 Total: 0.00 -5.71 332.99 -11.15 -16.87 By element: Atomic # 1 Polarization: -2.74 SS G_CDS: -6.27 Total: -9.01 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -3.44 Total: -1.09 kcal Atomic # 7 Polarization: -3.55 SS G_CDS: -0.58 Total: -4.13 kcal Atomic # 8 Polarization: -0.61 SS G_CDS: -0.80 Total: -1.41 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.08 Total: -6.25 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -5.71 -11.15 -16.87 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11572882_12175864.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.432 kcal (2) G-P(sol) polarization free energy of solvation -5.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.721 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.866 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds