Wall clock time and date at job start Mon Mar 8 2021 07:22:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53001 * 109.47187 * 2 1 4 4 C 1.52999 * 109.47579 * 239.99841 * 2 1 3 5 5 O 1.42899 * 109.47139 * 119.99768 * 2 1 3 6 6 C 1.42902 * 113.99903 * 60.00203 * 5 2 1 7 7 H 1.08993 * 112.90736 * 341.24804 * 6 5 2 8 8 C 1.53962 * 113.66723 * 112.55150 * 6 5 2 9 9 C 1.53782 * 87.11063 * 139.88843 * 8 6 5 10 10 H 1.08996 * 113.68722 * 89.19879 * 9 8 6 11 11 N 1.46499 * 113.61191 * 220.09091 * 9 8 6 12 12 C 1.39010 * 119.99709 * 252.49643 * 11 9 8 13 13 N 1.32400 * 119.70511 * 179.97438 * 12 11 9 14 14 C 1.31970 * 121.61872 * 179.97438 * 13 12 11 15 15 C 1.38018 * 120.85991 * 0.02563 * 14 13 12 16 16 C 1.50705 * 120.33555 * 179.97438 * 15 14 13 17 17 O 1.42899 * 109.47203 * 245.00109 * 16 15 14 18 18 Si 1.86295 * 109.46935 * 5.00305 * 16 15 14 19 19 C 1.38885 * 119.33063 * 359.97438 * 15 14 13 20 20 C 1.38301 * 118.50595 * 359.73181 * 19 15 14 21 21 C 1.53781 * 87.08260 * 334.63747 * 9 8 6 22 22 H 1.09001 * 109.46922 * 299.99822 * 1 2 3 23 23 H 1.08991 * 109.47104 * 60.00121 * 1 2 3 24 24 H 1.09003 * 109.46891 * 180.02562 * 1 2 3 25 25 H 1.08997 * 109.47169 * 179.97438 * 3 2 1 26 26 H 1.09005 * 109.46848 * 299.99824 * 3 2 1 27 27 H 1.09002 * 109.47435 * 59.99884 * 3 2 1 28 28 H 1.09001 * 109.47230 * 300.00390 * 4 2 1 29 29 H 1.09005 * 109.46754 * 59.99352 * 4 2 1 30 30 H 1.08997 * 109.47569 * 180.02562 * 4 2 1 31 31 H 1.08997 * 113.53543 * 25.33518 * 8 6 5 32 32 H 1.08998 * 113.73879 * 254.47115 * 8 6 5 33 33 H 0.96997 * 120.00777 * 72.49903 * 11 9 8 34 34 H 1.08001 * 119.56930 * 179.97438 * 14 13 12 35 35 H 1.09000 * 109.47103 * 124.99919 * 16 15 14 36 36 H 0.96695 * 113.99812 * 179.97438 * 17 16 15 37 37 H 1.48507 * 109.99904 * 178.67864 * 18 16 15 38 38 H 1.48505 * 109.99865 * 299.99581 * 18 16 15 39 39 H 1.07998 * 120.74492 * 180.02562 * 19 15 14 40 40 H 1.07999 * 120.45442 * 180.28601 * 20 19 15 41 41 H 1.09002 * 113.61445 * 139.98212 * 21 9 8 42 42 H 1.09002 * 113.61408 * 270.79943 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0063 -0.6736 1.1668 6 6 1.5847 -2.0355 1.2645 7 1 0.7242 -2.2595 0.6341 8 6 2.7340 -3.0500 1.1226 9 6 2.0571 -3.8562 2.2436 10 1 1.3259 -4.5794 1.8826 11 7 3.0012 -4.4326 3.2041 12 6 3.2444 -5.8012 3.2037 13 7 4.0991 -6.3160 4.0741 14 6 4.3579 -7.6096 4.1074 15 6 3.7419 -8.4777 3.2288 16 6 4.0465 -9.9528 3.2769 17 8 4.6910 -10.3459 2.0635 18 14 5.1697 -10.3081 4.7200 19 6 2.8384 -7.9780 2.2998 20 6 2.5827 -6.6188 2.2928 21 6 1.4333 -2.5311 2.7124 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 3.1300 1.4425 0.0005 26 1 1.6767 1.9563 -0.8901 27 1 1.6767 1.9564 0.8900 28 1 1.6768 -1.7489 -1.2492 29 1 1.6767 -0.2075 -2.1392 30 1 3.1301 -0.7217 -1.2489 31 1 3.7075 -2.6467 1.4014 32 1 2.7486 -3.5650 0.1620 33 1 3.4566 -3.8593 3.8404 34 1 5.0614 -7.9940 4.8311 35 1 3.1181 -10.5120 3.3928 36 1 4.9173 -11.2852 2.0249 37 1 5.4521 -11.7640 4.7975 38 1 6.4393 -9.5516 4.5738 39 1 2.3430 -8.6366 1.6019 40 1 1.8823 -6.1972 1.5870 41 1 0.3965 -2.6266 3.0351 42 1 2.0505 -1.9866 3.4271 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11572882_13915762.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:22:55 Heat of formation + Delta-G solvation = -6.849133 kcal Electronic energy + Delta-G solvation = -21709.183912 eV Core-core repulsion = 18463.957092 eV Total energy + Delta-G solvation = -3245.226821 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.162 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.49563 -40.75287 -38.77365 -37.81856 -35.38102 -33.74824 -33.21641 -31.17922 -28.51499 -28.44071 -26.74944 -26.65093 -25.00439 -24.41307 -22.35663 -21.06050 -20.81285 -18.75445 -18.51893 -18.09046 -17.60495 -16.84178 -16.50142 -16.16514 -15.99058 -15.50344 -15.20163 -15.11088 -14.92218 -14.48802 -14.24937 -14.03739 -13.84472 -13.78290 -13.55716 -13.36367 -13.24016 -12.95306 -12.76243 -12.74532 -12.45609 -12.20275 -12.08682 -11.93274 -11.81504 -11.35737 -11.01540 -10.67050 -10.53057 -10.42622 -10.23876 -8.62884 -4.94172 0.31959 0.50489 1.31630 1.60986 1.98002 2.05648 2.75200 2.85488 3.37235 3.43508 3.49324 3.60088 3.73894 3.77458 3.82836 3.88357 3.90764 4.00704 4.04778 4.13088 4.17647 4.37041 4.46507 4.50792 4.55138 4.60440 4.68705 4.71080 4.74584 4.80928 4.83124 4.85164 4.90668 4.94461 5.02054 5.08928 5.13415 5.25117 5.28986 5.38177 5.59325 6.06444 6.34151 6.47239 6.60210 7.23575 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.359 6.359 6 C 0.064 3.936 7 H 0.094 0.906 8 C -0.171 4.171 9 C 0.132 3.868 10 H 0.112 0.888 11 N -0.708 5.708 12 C 0.409 3.591 13 N -0.539 5.539 14 C 0.159 3.841 15 C -0.189 4.189 16 C -0.060 4.060 17 O -0.538 6.538 18 Si 0.677 3.323 19 C -0.005 4.005 20 C -0.240 4.240 21 C -0.142 4.142 22 H 0.065 0.935 23 H 0.068 0.932 24 H 0.059 0.941 25 H 0.063 0.937 26 H 0.071 0.929 27 H 0.064 0.936 28 H 0.058 0.942 29 H 0.066 0.934 30 H 0.064 0.936 31 H 0.095 0.905 32 H 0.073 0.927 33 H 0.408 0.592 34 H 0.155 0.845 35 H 0.074 0.926 36 H 0.378 0.622 37 H -0.260 1.260 38 H -0.253 1.253 39 H 0.134 0.866 40 H 0.133 0.867 41 H 0.081 0.919 42 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.131 -0.077 -0.684 4.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.066 3.934 3 C -0.197 4.197 4 C -0.234 4.234 5 O -0.278 6.278 6 C 0.006 3.994 7 H 0.112 0.888 8 C -0.210 4.210 9 C 0.025 3.975 10 H 0.130 0.870 11 N -0.340 5.340 12 C 0.173 3.827 13 N -0.256 5.256 14 C 0.001 3.999 15 C -0.194 4.194 16 C -0.170 4.170 17 O -0.345 6.345 18 Si 0.578 3.422 19 C -0.030 4.030 20 C -0.265 4.265 21 C -0.181 4.181 22 H 0.084 0.916 23 H 0.087 0.913 24 H 0.078 0.922 25 H 0.083 0.917 26 H 0.090 0.910 27 H 0.083 0.917 28 H 0.077 0.923 29 H 0.085 0.915 30 H 0.083 0.917 31 H 0.113 0.887 32 H 0.092 0.908 33 H 0.244 0.756 34 H 0.172 0.828 35 H 0.092 0.908 36 H 0.226 0.774 37 H -0.185 1.185 38 H -0.178 1.178 39 H 0.152 0.848 40 H 0.151 0.849 41 H 0.100 0.900 42 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -3.042 0.962 0.029 3.191 hybrid contribution -0.199 -1.237 -1.606 2.036 sum -3.241 -0.275 -1.577 3.615 Atomic orbital electron populations 1.22473 0.95574 1.02461 1.03152 1.21553 0.93139 0.93277 0.85449 1.21773 1.02060 0.93166 1.02654 1.22473 1.02351 1.00738 0.97835 1.88043 1.73727 1.23070 1.42927 1.23376 0.96888 0.82151 0.97011 0.88791 1.24161 1.00273 0.97140 0.99417 1.22230 0.91640 0.93654 0.89951 0.87009 1.44439 1.47172 1.03514 1.38827 1.18431 0.89270 0.85569 0.89426 1.67182 1.18874 1.14552 1.24953 1.22199 0.94884 0.87343 0.95451 1.19901 1.03076 0.94841 1.01616 1.24525 1.02400 0.94364 0.95752 1.86601 1.80426 1.30626 1.36885 0.95170 0.81807 0.80827 0.84397 1.21164 0.93144 0.94317 0.94424 1.21446 1.06645 0.94183 1.04185 1.23615 1.02295 0.94826 0.97336 0.91554 0.91305 0.92210 0.91744 0.91015 0.91724 0.92293 0.91482 0.91664 0.88656 0.90809 0.75586 0.82802 0.90818 0.77387 1.18511 1.17780 0.84820 0.84903 0.90043 0.88424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.21 8.38 37.16 0.31 0.53 16 2 C 0.10 -0.02 1.11 -90.62 -0.10 -0.12 16 3 C -0.14 0.07 8.84 37.16 0.33 0.39 16 4 C -0.18 0.15 8.38 37.16 0.31 0.46 16 5 O -0.36 -0.43 10.00 -35.23 -0.35 -0.78 16 6 C 0.06 -0.06 2.83 -25.82 -0.07 -0.13 16 7 H 0.09 -0.19 5.55 -51.93 -0.29 -0.48 16 8 C -0.17 0.12 7.72 -25.82 -0.20 -0.08 16 9 C 0.13 -0.16 4.04 -67.12 -0.27 -0.43 16 10 H 0.11 -0.26 6.09 -51.93 -0.32 -0.57 16 11 N -0.71 -0.44 5.53 -53.14 -0.29 -0.74 16 12 C 0.41 1.07 7.65 -155.01 -1.19 -0.12 16 13 N -0.54 -2.11 10.39 -12.43 -0.13 -2.23 16 14 C 0.16 0.42 9.84 -17.57 -0.17 0.25 16 15 C -0.19 -0.38 5.39 -104.46 -0.56 -0.95 16 16 C -0.06 -0.02 2.81 36.01 0.10 0.08 16 17 O -0.54 -0.80 12.82 -35.23 -0.45 -1.25 16 18 Si 0.68 -0.35 29.88 -169.99 -5.08 -5.43 16 19 C 0.00 -0.01 9.84 -39.32 -0.39 -0.39 16 20 C -0.24 -0.35 9.29 -39.22 -0.36 -0.71 16 21 C -0.14 0.20 7.66 -25.92 -0.20 0.00 16 22 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 24 H 0.06 -0.10 6.25 -51.93 -0.32 -0.43 16 25 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 26 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.06 -0.07 7.02 -51.93 -0.36 -0.44 16 29 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 30 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.09 0.07 8.14 -51.93 -0.42 -0.35 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.41 0.17 8.85 -40.82 -0.36 -0.19 16 34 H 0.16 0.12 4.87 -52.49 -0.26 -0.13 16 35 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 36 H 0.38 -0.96 8.74 45.56 0.40 -0.56 16 37 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 38 H -0.25 -0.67 7.05 56.52 0.40 -0.27 16 39 H 0.13 0.01 8.06 -52.49 -0.42 -0.42 16 40 H 0.13 -0.10 6.03 -52.49 -0.32 -0.41 16 41 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 42 H 0.10 -0.07 8.12 -51.93 -0.42 -0.49 16 LS Contribution 335.49 15.07 5.06 5.06 Total: 0.00 -6.04 335.49 -10.23 -16.27 By element: Atomic # 1 Polarization: -3.16 SS G_CDS: -6.51 Total: -9.67 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -2.46 Total: -1.22 kcal Atomic # 7 Polarization: -2.55 SS G_CDS: -0.42 Total: -2.97 kcal Atomic # 8 Polarization: -1.23 SS G_CDS: -0.80 Total: -2.04 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -5.08 Total: -5.43 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -6.04 -10.23 -16.27 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11572882_13915762.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.421 kcal (2) G-P(sol) polarization free energy of solvation -6.043 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.377 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.227 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.270 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds