Wall clock time and date at job start Mon Mar 8 2021 07:22:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53005 * 109.46972 * 2 1 4 4 C 1.52998 * 109.47365 * 239.99885 * 2 1 3 5 5 O 1.42902 * 109.46752 * 119.99600 * 2 1 3 6 6 C 1.42901 * 113.99678 * 60.00286 * 5 2 1 7 7 H 1.09000 * 112.91049 * 18.74630 * 6 5 2 8 8 C 1.53787 * 113.61020 * 149.99776 * 6 5 2 9 9 C 1.53784 * 87.07923 * 139.98045 * 8 6 5 10 10 H 1.09002 * 113.61478 * 89.11632 * 9 8 6 11 11 N 1.46497 * 113.61569 * 220.01663 * 9 8 6 12 12 C 1.38600 * 120.00322 * 205.00223 * 11 9 8 13 13 N 1.29685 * 124.94959 * 359.68899 * 12 11 9 14 14 C 1.32124 * 116.86955 * 179.81774 * 13 12 11 15 15 C 1.33332 * 114.57389 * 0.47500 * 14 13 12 16 16 C 1.50696 * 125.94698 * 179.75408 * 15 14 13 17 17 O 1.42898 * 109.47408 * 64.97712 * 16 15 14 18 18 Si 1.86307 * 109.47116 * 184.97677 * 16 15 14 19 19 S 1.70968 * 124.95233 * 180.02562 * 12 11 9 20 20 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 21 21 H 1.08996 * 109.47538 * 300.00568 * 1 2 3 22 22 H 1.09000 * 109.46938 * 59.99936 * 1 2 3 23 23 H 1.08994 * 109.47205 * 179.97438 * 1 2 3 24 24 H 1.09003 * 109.46811 * 179.97438 * 3 2 1 25 25 H 1.09003 * 109.46926 * 299.99524 * 3 2 1 26 26 H 1.08999 * 109.46818 * 59.99752 * 3 2 1 27 27 H 1.09000 * 109.46973 * 300.00528 * 4 2 1 28 28 H 1.09000 * 109.46946 * 60.00184 * 4 2 1 29 29 H 1.08997 * 109.47150 * 179.97438 * 4 2 1 30 30 H 1.09004 * 113.61202 * 254.52798 * 8 6 5 31 31 H 1.08994 * 113.61447 * 25.43229 * 8 6 5 32 32 H 0.97009 * 119.99534 * 24.99936 * 11 9 8 33 33 H 1.07997 * 122.71246 * 180.23321 * 14 13 12 34 34 H 1.09007 * 109.47387 * 304.97236 * 16 15 14 35 35 H 0.96697 * 114.00020 * 60.00157 * 17 16 15 36 36 H 1.48500 * 109.99914 * 179.97438 * 18 16 15 37 37 H 1.48497 * 109.99744 * 301.32197 * 18 16 15 38 38 H 1.09006 * 113.61307 * 270.88660 * 20 9 8 39 39 H 1.09007 * 113.61642 * 139.98417 * 20 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0063 -0.6736 1.1669 6 6 1.5846 -2.0355 1.2645 7 1 1.2511 -2.4458 0.3114 8 6 2.5836 -2.9378 2.0080 9 6 1.3666 -3.6119 2.6633 10 1 0.9735 -4.4532 2.0925 11 7 1.5623 -3.9262 4.0807 12 6 0.8360 -4.9487 4.6705 13 7 -0.0431 -5.6825 4.0617 14 6 -0.6404 -6.6175 4.7791 15 6 -0.2546 -6.6691 6.0543 16 6 -0.7702 -7.6277 7.0965 17 8 -0.4011 -8.9616 6.7410 18 14 -0.0325 -7.1999 8.7530 19 16 0.9624 -5.4211 6.3088 20 6 0.6076 -2.2962 2.4231 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0276 -0.0005 24 1 3.1300 1.4425 0.0005 25 1 1.6767 1.9563 -0.8901 26 1 1.6766 1.9563 0.8900 27 1 1.6767 -1.7489 -1.2492 28 1 1.6768 -0.2074 -2.1392 29 1 3.1300 -0.7208 -1.2494 30 1 3.1477 -3.5993 1.3503 31 1 3.2170 -2.3997 2.7132 32 1 2.2003 -3.4186 4.6064 33 1 -1.3839 -7.2835 4.3669 34 1 -1.8563 -7.5538 7.1525 35 1 0.5534 -9.1007 6.6728 36 1 -0.5337 -8.1377 9.7896 37 1 1.4493 -7.2658 8.6813 38 1 0.7008 -1.5826 3.2419 39 1 -0.4238 -2.4397 2.1007 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11572882_15704118.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:22:58 Heat of formation + Delta-G solvation = -2.720231 kcal Electronic energy + Delta-G solvation = -20300.149945 eV Core-core repulsion = 17144.254414 eV Total energy + Delta-G solvation = -3155.895532 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.119 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.18610 -40.44682 -38.73487 -37.85587 -35.28452 -33.57306 -31.16688 -28.52364 -28.42842 -26.88815 -26.66943 -25.51773 -23.98823 -21.62029 -20.94863 -20.54393 -19.48831 -18.31983 -17.70114 -17.12688 -16.76695 -16.37915 -16.03138 -15.96973 -15.85853 -15.37296 -15.03477 -14.86492 -14.47790 -14.22081 -13.82896 -13.56379 -13.37817 -13.26086 -12.95777 -12.87949 -12.76772 -12.73780 -12.36151 -12.34623 -12.11942 -11.95549 -11.87173 -11.35436 -11.08196 -10.86900 -10.42087 -10.22129 -10.17077 -8.71420 -5.03090 -0.00470 0.05931 0.71938 1.26887 1.56917 1.91924 2.05116 2.10229 2.72829 3.36768 3.40460 3.48803 3.70181 3.77048 3.80277 3.84406 3.92276 3.96106 4.03665 4.24923 4.52553 4.55157 4.57689 4.62744 4.67781 4.71974 4.74118 4.76807 4.83226 4.86327 4.92313 4.95028 4.99746 5.08885 5.25146 5.26534 5.30302 5.87000 6.06478 6.34959 6.37609 7.03128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.359 6.359 6 C 0.065 3.935 7 H 0.095 0.905 8 C -0.145 4.145 9 C 0.141 3.859 10 H 0.120 0.880 11 N -0.679 5.679 12 C 0.327 3.673 13 N -0.552 5.552 14 C 0.120 3.880 15 C -0.306 4.306 16 C -0.017 4.017 17 O -0.527 6.527 18 Si 0.653 3.347 19 S 0.087 5.913 20 C -0.167 4.167 21 H 0.064 0.936 22 H 0.066 0.934 23 H 0.059 0.941 24 H 0.063 0.937 25 H 0.071 0.929 26 H 0.063 0.937 27 H 0.059 0.941 28 H 0.068 0.932 29 H 0.065 0.935 30 H 0.081 0.919 31 H 0.096 0.904 32 H 0.415 0.585 33 H 0.176 0.824 34 H 0.125 0.875 35 H 0.376 0.624 36 H -0.238 1.238 37 H -0.243 1.243 38 H 0.093 0.907 39 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.754 3.156 -0.752 3.331 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.279 6.279 6 C 0.007 3.993 7 H 0.113 0.887 8 C -0.184 4.184 9 C 0.033 3.967 10 H 0.137 0.863 11 N -0.317 5.317 12 C -0.043 4.043 13 N -0.277 5.277 14 C -0.031 4.031 15 C -0.429 4.429 16 C -0.130 4.130 17 O -0.333 6.333 18 Si 0.552 3.448 19 S 0.336 5.664 20 C -0.207 4.207 21 H 0.083 0.917 22 H 0.085 0.915 23 H 0.078 0.922 24 H 0.082 0.918 25 H 0.090 0.910 26 H 0.082 0.918 27 H 0.078 0.922 28 H 0.087 0.913 29 H 0.084 0.916 30 H 0.099 0.901 31 H 0.114 0.886 32 H 0.253 0.747 33 H 0.193 0.807 34 H 0.143 0.857 35 H 0.224 0.776 36 H -0.161 1.161 37 H -0.167 1.167 38 H 0.111 0.889 39 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 1.186 3.357 0.184 3.565 hybrid contribution 0.044 -1.176 -1.065 1.587 sum 1.229 2.180 -0.881 2.654 Atomic orbital electron populations 1.22471 0.95399 1.02591 1.02948 1.21551 0.93284 0.93255 0.85298 1.21772 1.02003 0.93189 1.02656 1.22475 1.02332 1.00896 0.97993 1.88029 1.73769 1.23040 1.43014 1.23329 0.95453 0.83034 0.97513 0.88746 1.23663 0.97168 0.97675 0.99895 1.22274 0.96854 0.96992 0.80554 0.86258 1.44022 1.43338 1.33879 1.10494 1.23764 0.94017 0.93237 0.93304 1.66474 1.13256 1.10716 1.37273 1.21334 0.98213 0.94541 0.88987 1.25501 1.08703 1.07856 1.00829 1.24067 1.04475 0.81308 1.03174 1.86614 1.28708 1.27019 1.90950 0.95155 0.81493 0.91025 0.77105 1.84044 1.41482 1.31941 1.08912 1.24081 0.99597 0.97487 0.99526 0.91665 0.91496 0.92229 0.91756 0.91018 0.91753 0.92172 0.91309 0.91587 0.90055 0.88573 0.74683 0.80742 0.85723 0.77587 1.16122 1.16721 0.88861 0.90673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.14 8.38 37.16 0.31 0.45 16 2 C 0.11 -0.02 1.11 -90.62 -0.10 -0.12 16 3 C -0.14 0.09 8.84 37.16 0.33 0.42 16 4 C -0.18 0.18 8.38 37.16 0.31 0.49 16 5 O -0.36 -0.38 10.00 -35.23 -0.35 -0.73 16 6 C 0.07 -0.04 2.82 -25.92 -0.07 -0.11 16 7 H 0.09 -0.12 5.55 -51.93 -0.29 -0.41 16 8 C -0.15 0.20 7.66 -25.91 -0.20 0.00 16 9 C 0.14 -0.09 4.36 -67.12 -0.29 -0.38 16 10 H 0.12 0.06 7.67 -51.93 -0.40 -0.34 16 11 N -0.68 0.31 5.51 -55.00 -0.30 0.01 16 12 C 0.33 0.48 8.09 -87.69 -0.71 -0.23 16 13 N -0.55 -1.67 9.84 -15.21 -0.15 -1.82 16 14 C 0.12 0.24 11.24 -19.14 -0.22 0.03 16 15 C -0.31 -0.28 5.73 -36.02 -0.21 -0.49 16 16 C -0.02 0.00 2.99 36.00 0.11 0.11 16 17 O -0.53 -0.71 12.88 -35.23 -0.45 -1.16 16 18 Si 0.65 -0.27 31.07 -169.99 -5.28 -5.55 16 19 S 0.09 0.02 20.59 -107.50 -2.21 -2.19 16 20 C -0.17 0.08 7.71 -25.92 -0.20 -0.12 16 21 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 22 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 23 H 0.06 -0.05 7.02 -51.93 -0.36 -0.42 16 24 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 25 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 26 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.06 -0.08 6.25 -51.93 -0.32 -0.40 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.10 -0.13 8.12 -51.93 -0.42 -0.56 16 32 H 0.42 -0.98 8.85 -40.82 -0.36 -1.34 16 33 H 0.18 0.14 8.06 -52.49 -0.42 -0.28 16 34 H 0.13 -0.11 7.96 -51.93 -0.41 -0.53 16 35 H 0.38 -0.47 8.70 45.56 0.40 -0.07 16 36 H -0.24 -0.53 7.11 56.52 0.40 -0.13 16 37 H -0.24 -0.35 7.11 56.52 0.40 0.05 16 38 H 0.09 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 330.98 15.07 4.99 4.99 Total: 0.00 -4.90 330.98 -10.72 -15.63 By element: Atomic # 1 Polarization: -3.18 SS G_CDS: -6.02 Total: -9.21 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -0.94 Total: 0.04 kcal Atomic # 7 Polarization: -1.36 SS G_CDS: -0.45 Total: -1.82 kcal Atomic # 8 Polarization: -1.08 SS G_CDS: -0.81 Total: -1.89 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.28 Total: -5.55 kcal Atomic # 16 Polarization: 0.02 SS G_CDS: -2.21 Total: -2.19 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -4.90 -10.72 -15.63 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11572882_15704118.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.905 kcal (2) G-P(sol) polarization free energy of solvation -4.901 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.724 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds