Wall clock time and date at job start Mon Mar 8 2021 07:23:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.33333 * 125.94865 * 2 1 4 4 C 1.50699 * 122.70957 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.47352 * 41.95412 * 4 3 2 6 6 Si 1.86305 * 109.46591 * 161.95371 * 4 3 2 7 7 N 1.32117 * 114.57680 * 180.02562 * 3 2 1 8 8 C 1.29696 * 116.86706 * 359.97438 * 7 3 2 9 9 N 1.38613 * 124.94946 * 180.02562 * 8 7 3 10 10 C 1.46495 * 119.99933 * 180.02562 * 9 8 7 11 11 H 1.08998 * 112.85360 * 23.80195 * 10 9 8 12 12 C 1.53789 * 113.61349 * 154.99483 * 10 9 8 13 13 C 1.53783 * 87.07769 * 139.97799 * 12 10 9 14 14 H 1.09004 * 113.61313 * 89.11612 * 13 12 10 15 15 O 1.42898 * 113.61744 * 220.01695 * 13 12 10 16 16 C 1.42892 * 114.00424 * 210.00411 * 15 13 12 17 17 C 1.53000 * 109.47312 * 59.99858 * 16 15 13 18 18 C 1.53001 * 109.47537 * 179.97438 * 16 15 13 19 19 C 1.53005 * 109.47040 * 300.00268 * 16 15 13 20 20 C 1.53776 * 113.61287 * 252.49317 * 10 9 8 21 21 S 1.70963 * 110.10033 * 359.72711 * 8 7 3 22 22 H 1.09002 * 109.47171 * 84.06369 * 1 2 3 23 23 H 1.09000 * 109.47071 * 324.06319 * 1 2 3 24 24 H 1.09001 * 109.46913 * 204.06400 * 1 2 3 25 25 H 1.08998 * 109.47171 * 281.94857 * 4 3 2 26 26 H 0.96700 * 113.99765 * 59.99880 * 5 4 3 27 27 H 1.48501 * 109.99987 * 58.68296 * 6 4 3 28 28 H 1.48507 * 109.99669 * 179.97438 * 6 4 3 29 29 H 0.97004 * 119.99874 * 359.97438 * 9 8 7 30 30 H 1.08994 * 113.61306 * 254.52746 * 12 10 9 31 31 H 1.09005 * 113.61059 * 25.35004 * 12 10 9 32 32 H 1.09002 * 109.46909 * 59.99973 * 17 16 15 33 33 H 1.08994 * 109.47691 * 180.02562 * 17 16 15 34 34 H 1.09000 * 109.47504 * 300.00642 * 17 16 15 35 35 H 1.09000 * 109.46874 * 59.99761 * 18 16 15 36 36 H 1.08999 * 109.47405 * 179.97438 * 18 16 15 37 37 H 1.09002 * 109.46981 * 300.00208 * 18 16 15 38 38 H 1.08992 * 109.47131 * 59.99888 * 19 16 15 39 39 H 1.09003 * 109.46544 * 180.02562 * 19 16 15 40 40 H 1.08999 * 109.46867 * 299.99093 * 19 16 15 41 41 H 1.08998 * 113.61452 * 334.56754 * 20 10 9 42 42 H 1.09000 * 113.61394 * 105.47340 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0794 0.0000 4 6 1.7413 2.4830 0.0006 5 8 0.6350 2.5619 0.9017 6 14 3.0711 3.6690 0.5446 7 7 3.5850 0.8189 -0.0005 8 6 3.9314 -0.4309 -0.0005 9 7 5.2384 -0.8926 -0.0005 10 6 5.5065 -2.3328 -0.0010 11 1 4.6806 -2.9170 -0.4066 12 6 6.8748 -2.7045 -0.5966 13 6 6.9928 -3.7471 0.5277 14 1 6.5733 -4.7190 0.2676 15 8 8.3043 -3.8393 1.0876 16 6 8.6345 -5.1379 1.5839 17 6 8.5584 -6.1545 0.4430 18 6 10.0534 -5.1197 2.1562 19 6 7.6455 -5.5304 2.6834 20 6 6.0358 -2.8613 1.3427 21 16 2.5413 -1.4260 0.0080 22 1 -0.3633 0.1063 -1.0222 23 1 -0.3633 0.8321 0.6031 24 1 -0.3633 -0.9384 0.4190 25 1 1.4105 2.7443 -1.0046 26 1 0.8567 2.3418 1.8168 27 1 4.2402 3.5737 -0.3662 28 1 2.5431 5.0570 0.5488 29 1 5.9756 -0.2620 -0.0009 30 1 6.8130 -3.1418 -1.5930 31 1 7.6117 -1.9040 -0.5305 32 1 9.2629 -5.8749 -0.3403 33 1 8.8098 -7.1452 0.8216 34 1 7.5478 -6.1676 0.0348 35 1 10.1080 -4.3954 2.9689 36 1 10.3051 -6.1102 2.5351 37 1 10.7576 -4.8403 1.3725 38 1 6.6350 -5.5435 2.2753 39 1 7.8978 -6.5209 3.0622 40 1 7.6999 -4.8063 3.4963 41 1 6.5438 -2.1042 1.9401 42 1 5.2967 -3.4253 1.9117 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11572882_15704122.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:23:00 Heat of formation + Delta-G solvation = -6.090717 kcal Electronic energy + Delta-G solvation = -22336.642231 eV Core-core repulsion = 19025.062924 eV Total energy + Delta-G solvation = -3311.579306 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.134 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.26521 -40.81441 -38.91355 -37.62927 -35.37062 -33.72230 -32.37272 -29.21412 -28.51854 -28.47743 -26.85037 -25.84286 -25.16615 -23.97278 -21.65927 -21.02267 -20.19929 -19.09616 -18.02113 -17.70883 -17.30543 -16.92554 -16.59396 -16.07209 -16.00360 -15.57293 -15.31455 -15.08628 -14.62993 -14.35039 -14.10999 -14.02279 -13.69266 -13.63724 -13.45977 -13.28942 -13.25782 -12.98688 -12.83602 -12.78208 -12.71070 -12.44702 -12.25169 -12.15222 -11.90596 -11.80693 -11.41522 -10.91382 -10.52415 -10.49615 -10.28081 -9.96697 -8.59453 -4.76880 0.06131 0.20953 0.81630 1.47439 1.83732 1.91005 1.98539 2.27671 2.67987 3.23155 3.34099 3.44045 3.54894 3.61099 3.65478 3.78314 3.85394 3.97274 4.03081 4.21069 4.40277 4.44202 4.47328 4.54303 4.57113 4.58990 4.66701 4.68150 4.75417 4.77696 4.81156 4.83872 4.85792 4.94054 4.96539 5.05747 5.18257 5.21517 5.25473 5.37171 5.63825 6.26034 6.30877 6.52768 6.99573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C -0.231 4.231 3 C 0.063 3.937 4 C -0.034 4.034 5 O -0.535 6.535 6 Si 0.721 3.279 7 N -0.544 5.544 8 C 0.320 3.680 9 N -0.680 5.680 10 C 0.128 3.872 11 H 0.109 0.891 12 C -0.140 4.140 13 C 0.065 3.935 14 H 0.096 0.904 15 O -0.357 6.357 16 C 0.105 3.895 17 C -0.180 4.180 18 C -0.139 4.139 19 C -0.177 4.177 20 C -0.169 4.169 21 S 0.095 5.905 22 H 0.067 0.933 23 H 0.102 0.898 24 H 0.061 0.939 25 H 0.119 0.881 26 H 0.380 0.620 27 H -0.256 1.256 28 H -0.264 1.264 29 H 0.414 0.586 30 H 0.083 0.917 31 H 0.100 0.900 32 H 0.065 0.935 33 H 0.068 0.932 34 H 0.059 0.941 35 H 0.064 0.936 36 H 0.071 0.929 37 H 0.064 0.936 38 H 0.058 0.942 39 H 0.067 0.933 40 H 0.065 0.935 41 H 0.099 0.901 42 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.003 -4.986 2.184 5.535 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.354 4.354 3 C -0.067 4.067 4 C -0.148 4.148 5 O -0.340 6.340 6 Si 0.623 3.377 7 N -0.270 5.270 8 C -0.051 4.051 9 N -0.320 5.320 10 C 0.022 3.978 11 H 0.127 0.873 12 C -0.179 4.179 13 C 0.007 3.993 14 H 0.114 0.886 15 O -0.276 6.276 16 C 0.066 3.934 17 C -0.237 4.237 18 C -0.197 4.197 19 C -0.234 4.234 20 C -0.208 4.208 21 S 0.344 5.656 22 H 0.086 0.914 23 H 0.120 0.880 24 H 0.080 0.920 25 H 0.136 0.864 26 H 0.227 0.773 27 H -0.180 1.180 28 H -0.190 1.190 29 H 0.253 0.747 30 H 0.102 0.898 31 H 0.119 0.881 32 H 0.085 0.915 33 H 0.087 0.913 34 H 0.078 0.922 35 H 0.083 0.917 36 H 0.090 0.910 37 H 0.083 0.917 38 H 0.077 0.923 39 H 0.086 0.914 40 H 0.084 0.916 41 H 0.117 0.883 42 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.595 -4.846 1.434 5.299 hybrid contribution -0.355 0.305 -0.597 0.759 sum 1.239 -4.540 0.837 4.780 Atomic orbital electron populations 1.20371 0.86562 1.03651 1.03174 1.25158 1.01247 0.92619 1.16401 1.20084 0.86698 0.97214 1.02713 1.24559 0.97144 0.95815 0.97239 1.86451 1.34369 1.91481 1.21677 0.93792 0.77050 0.75430 0.91452 1.65918 1.17210 1.16644 1.27243 1.23300 0.91843 0.91471 0.98516 1.43904 1.01804 1.06446 1.79835 1.22333 0.97783 0.79746 0.97927 0.87334 1.23612 0.95760 0.99614 0.98876 1.23322 0.84392 0.97671 0.93957 0.88628 1.88042 1.31040 1.30521 1.78043 1.21564 0.95754 0.83150 0.92945 1.22479 1.02488 0.99687 0.99061 1.21773 0.93816 1.02597 1.01472 1.22476 0.99235 1.02424 0.99288 1.24140 0.99029 1.00311 0.97336 1.83929 0.96660 1.10863 1.74145 0.91431 0.88005 0.92022 0.86414 0.77258 1.18049 1.19006 0.74708 0.89822 0.88125 0.91547 0.91255 0.92213 0.91712 0.90981 0.91719 0.92270 0.91436 0.91612 0.88261 0.90454 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.03 9.95 36.00 0.36 0.33 16 2 C -0.23 -0.44 6.49 -36.02 -0.23 -0.68 16 3 C 0.06 0.16 5.99 -84.18 -0.50 -0.34 16 4 C -0.03 -0.05 2.78 36.01 0.10 0.05 16 5 O -0.54 -0.19 10.06 -35.23 -0.35 -0.55 16 6 Si 0.72 1.09 31.90 -169.99 -5.42 -4.33 16 7 N -0.54 -1.85 8.65 -11.36 -0.10 -1.95 16 8 C 0.32 0.63 8.24 -87.67 -0.72 -0.09 16 9 N -0.68 0.06 5.51 -54.99 -0.30 -0.24 16 10 C 0.13 -0.22 4.23 -67.12 -0.28 -0.51 16 11 H 0.11 -0.24 7.06 -51.93 -0.37 -0.60 16 12 C -0.14 0.28 7.66 -25.91 -0.20 0.08 16 13 C 0.07 -0.10 2.82 -25.92 -0.07 -0.18 16 14 H 0.10 -0.25 5.55 -51.93 -0.29 -0.54 16 15 O -0.36 -0.15 10.00 -35.23 -0.35 -0.50 16 16 C 0.10 -0.09 1.11 -90.62 -0.10 -0.19 16 17 C -0.18 0.30 8.38 37.16 0.31 0.61 16 18 C -0.14 0.14 8.84 37.16 0.33 0.47 16 19 C -0.18 0.27 8.39 37.16 0.31 0.58 16 20 C -0.17 0.29 7.71 -25.92 -0.20 0.09 16 21 S 0.10 0.09 21.69 -107.50 -2.33 -2.24 16 22 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 23 H 0.10 0.02 5.58 -51.93 -0.29 -0.27 16 24 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 25 H 0.12 0.21 7.96 -51.93 -0.41 -0.20 16 26 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 27 H -0.26 -1.29 7.11 56.52 0.40 -0.88 16 28 H -0.26 -1.01 7.11 56.52 0.40 -0.61 16 29 H 0.41 -0.21 8.85 -40.82 -0.36 -0.57 16 30 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 31 H 0.10 -0.15 8.12 -51.93 -0.42 -0.57 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 34 H 0.06 -0.13 6.25 -51.93 -0.32 -0.45 16 35 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.06 -0.11 7.02 -51.93 -0.36 -0.48 16 39 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 40 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 42 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 LS Contribution 347.40 15.07 5.24 5.24 Total: 0.00 -5.22 347.40 -11.24 -16.46 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -6.70 Total: -12.10 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -0.91 Total: 0.22 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -0.40 Total: -2.20 kcal Atomic # 8 Polarization: -0.34 SS G_CDS: -0.71 Total: -1.05 kcal Atomic # 14 Polarization: 1.09 SS G_CDS: -5.42 Total: -4.33 kcal Atomic # 16 Polarization: 0.09 SS G_CDS: -2.33 Total: -2.24 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -5.22 -11.24 -16.46 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11572882_15704122.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.368 kcal (2) G-P(sol) polarization free energy of solvation -5.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.459 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.091 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds