Wall clock time and date at job start Mon Mar 8 2021 07:23:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 C 1.53006 * 109.47127 * 120.00347 * 2 1 3 5 5 O 1.42906 * 109.47321 * 240.00014 * 2 1 3 6 6 C 1.42898 * 113.99821 * 59.99868 * 5 2 1 7 7 H 1.09004 * 112.85036 * 341.19710 * 6 5 2 8 8 C 1.53779 * 113.61251 * 112.50258 * 6 5 2 9 9 C 1.53787 * 87.07995 * 139.98162 * 8 6 5 10 10 H 1.09005 * 113.61390 * 89.11628 * 9 8 6 11 11 N 1.46498 * 113.61669 * 220.02041 * 9 8 6 12 12 C 1.39148 * 119.99916 * 252.49927 * 11 9 8 13 13 N 1.32332 * 119.71599 * 359.97438 * 12 11 9 14 14 C 1.32007 * 121.64473 * 179.97438 * 13 12 11 15 15 C 1.37991 * 120.90100 * 359.97438 * 14 13 12 16 16 C 1.50696 * 120.32717 * 179.97438 * 15 14 13 17 17 O 1.42897 * 109.47275 * 245.00381 * 16 15 14 18 18 Si 1.86307 * 109.47285 * 5.00558 * 16 15 14 19 19 C 1.38901 * 119.34533 * 0.02562 * 15 14 13 20 20 C 1.38448 * 118.48490 * 359.74389 * 19 15 14 21 21 F 1.35103 * 120.47199 * 180.27173 * 20 19 15 22 22 C 1.53777 * 113.61489 * 210.00161 * 6 5 2 23 23 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 24 24 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 25 25 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.47066 * 60.00169 * 3 2 1 27 27 H 1.08996 * 109.47747 * 179.97438 * 3 2 1 28 28 H 1.09002 * 109.47103 * 300.00247 * 3 2 1 29 29 H 1.08993 * 109.46955 * 60.00011 * 4 2 1 30 30 H 1.09000 * 109.47050 * 179.97438 * 4 2 1 31 31 H 1.09001 * 109.47002 * 299.99574 * 4 2 1 32 32 H 1.08998 * 113.61977 * 254.52635 * 8 6 5 33 33 H 1.08998 * 113.61693 * 25.43845 * 8 6 5 34 34 H 0.97002 * 120.00093 * 72.49888 * 11 9 8 35 35 H 1.07998 * 119.55528 * 179.97438 * 14 13 12 36 36 H 1.08999 * 109.46987 * 125.00445 * 16 15 14 37 37 H 0.96702 * 114.00106 * 60.00207 * 17 16 15 38 38 H 1.48497 * 110.00060 * 179.97438 * 18 16 15 39 39 H 1.48503 * 109.99469 * 301.31725 * 18 16 15 40 40 H 1.08001 * 120.75683 * 180.02562 * 19 15 14 41 41 H 1.09004 * 113.61750 * 334.57260 * 22 6 5 42 42 H 1.09006 * 113.61568 * 105.38774 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 1.2492 5 8 2.0064 -0.6737 -1.1668 6 6 1.5847 -0.0773 -2.3951 7 1 0.7236 0.5797 -2.2729 8 6 2.7334 0.5529 -3.2001 9 6 2.0562 -0.0128 -4.4596 10 1 1.3246 0.6628 -4.9028 11 7 3.0001 -0.5542 -5.4405 12 6 3.2427 0.1335 -6.6256 13 7 2.6175 1.2758 -6.8610 14 6 2.8194 1.9597 -7.9719 15 6 3.6969 1.5046 -8.9347 16 6 3.9171 2.2955 -10.1984 17 8 3.4482 1.5430 -11.3191 18 14 2.9824 3.9038 -10.0954 19 6 4.3744 0.3097 -8.7281 20 6 4.1465 -0.3836 -7.5516 21 9 4.7880 -1.5471 -7.3068 22 6 1.4333 -1.0834 -3.5482 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 1.6768 1.9562 0.8900 27 1 3.1300 1.4424 0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.6767 -1.7489 1.2492 30 1 3.1300 -0.7217 1.2490 31 1 1.6767 -0.2075 2.1393 32 1 2.7463 1.6421 -3.1632 33 1 3.7072 0.1097 -2.9916 34 1 3.4558 -1.3921 -5.2639 35 1 2.2906 2.8881 -8.1295 36 1 4.9809 2.5005 -10.3179 37 1 2.5071 1.3241 -11.2799 38 1 3.1919 4.6934 -11.3354 39 1 1.5344 3.6380 -9.9004 40 1 5.0667 -0.0675 -9.4662 41 1 2.0515 -1.9739 -3.4348 42 1 0.3965 -1.3161 -3.7913 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11572882_17656566.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:23:03 Heat of formation + Delta-G solvation = -54.034558 kcal Electronic energy + Delta-G solvation = -24155.205272 eV Core-core repulsion = 20438.478362 eV Total energy + Delta-G solvation = -3716.726910 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.153 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -49.84647 -41.51779 -40.80496 -38.79847 -37.92655 -35.46889 -33.69891 -33.14448 -31.15478 -28.49996 -28.41653 -26.83424 -26.64879 -25.62149 -24.02198 -22.88144 -21.15305 -20.83310 -19.24310 -18.67191 -18.32831 -17.74591 -17.50961 -16.95066 -16.77408 -16.24180 -16.05890 -15.92174 -15.73905 -15.45944 -15.01580 -14.89392 -14.37079 -14.33752 -14.19084 -13.96839 -13.52968 -13.45106 -13.32711 -13.22041 -12.92649 -12.76539 -12.72881 -12.68325 -12.31103 -12.08422 -11.99715 -11.86155 -11.33690 -11.19022 -10.77229 -10.61410 -10.53468 -10.39512 -8.75174 -5.01590 -0.05640 0.12886 1.21259 1.52832 1.91424 1.93495 2.54834 2.73097 3.06289 3.28174 3.35648 3.46392 3.52757 3.56370 3.79916 3.82550 3.84258 3.86179 3.94438 4.00192 4.05423 4.28630 4.43191 4.46930 4.53461 4.59851 4.65919 4.71470 4.72325 4.73274 4.77084 4.85151 4.87837 4.95811 4.97453 4.99834 5.05371 5.15623 5.27208 5.30488 5.44816 5.96712 6.18770 6.35305 6.37594 6.95999 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.176 4.176 4 C -0.139 4.139 5 O -0.360 6.360 6 C 0.065 3.935 7 H 0.095 0.905 8 C -0.167 4.167 9 C 0.137 3.863 10 H 0.122 0.878 11 N -0.703 5.703 12 C 0.392 3.608 13 N -0.513 5.513 14 C 0.147 3.853 15 C -0.209 4.209 16 C -0.062 4.062 17 O -0.530 6.530 18 Si 0.684 3.316 19 C -0.037 4.037 20 C -0.021 4.021 21 F -0.133 7.133 22 C -0.147 4.147 23 H 0.059 0.941 24 H 0.068 0.932 25 H 0.065 0.935 26 H 0.066 0.934 27 H 0.064 0.936 28 H 0.059 0.941 29 H 0.063 0.937 30 H 0.063 0.937 31 H 0.071 0.929 32 H 0.075 0.925 33 H 0.091 0.909 34 H 0.414 0.586 35 H 0.163 0.837 36 H 0.120 0.880 37 H 0.376 0.624 38 H -0.254 1.254 39 H -0.256 1.256 40 H 0.149 0.851 41 H 0.094 0.906 42 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.371 2.509 2.638 3.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.066 3.934 3 C -0.234 4.234 4 C -0.196 4.196 5 O -0.279 6.279 6 C 0.007 3.993 7 H 0.112 0.888 8 C -0.207 4.207 9 C 0.032 3.968 10 H 0.139 0.861 11 N -0.335 5.335 12 C 0.153 3.847 13 N -0.229 5.229 14 C -0.011 4.011 15 C -0.214 4.214 16 C -0.172 4.172 17 O -0.336 6.336 18 Si 0.584 3.416 19 C -0.063 4.063 20 C -0.047 4.047 21 F -0.112 7.112 22 C -0.185 4.185 23 H 0.078 0.922 24 H 0.087 0.913 25 H 0.084 0.916 26 H 0.085 0.915 27 H 0.083 0.917 28 H 0.078 0.922 29 H 0.082 0.918 30 H 0.082 0.918 31 H 0.090 0.910 32 H 0.093 0.907 33 H 0.110 0.890 34 H 0.251 0.749 35 H 0.180 0.820 36 H 0.138 0.862 37 H 0.224 0.776 38 H -0.179 1.179 39 H -0.181 1.181 40 H 0.167 0.833 41 H 0.113 0.887 42 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.950 3.246 2.888 4.762 hybrid contribution 0.184 -1.602 -0.993 1.894 sum -1.767 1.644 1.895 3.068 Atomic orbital electron populations 1.22475 0.95606 1.02981 1.02614 1.21547 0.93126 0.92238 0.86496 1.22468 1.02318 0.96024 1.02569 1.21771 1.02030 1.00899 0.94934 1.88036 1.73739 1.53448 1.12673 1.23340 0.97034 0.95517 0.83439 0.88761 1.24068 0.99884 1.01414 0.95313 1.22208 0.91758 0.96399 0.86459 0.86055 1.44545 1.47276 1.25514 1.16125 1.18468 0.89780 0.89650 0.86764 1.67289 1.26625 1.06359 1.22675 1.22395 0.93550 0.97527 0.87598 1.20848 1.02525 0.98292 0.99727 1.24826 1.06442 1.02379 0.83567 1.86616 1.30024 1.74047 1.42925 0.95068 0.80290 0.78677 0.87526 1.21289 0.97416 0.93129 0.94489 1.18008 1.01410 0.87526 0.97750 1.91496 1.80179 1.45154 1.94400 1.23660 1.02268 0.98535 0.94076 0.92172 0.91317 0.91608 0.91514 0.91684 0.92206 0.91772 0.91763 0.91027 0.90668 0.89011 0.74886 0.82015 0.86249 0.77601 1.17856 1.18107 0.83329 0.88707 0.90165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.17 8.38 37.16 0.31 0.48 16 2 C 0.10 -0.01 1.11 -90.62 -0.10 -0.11 16 3 C -0.18 0.14 8.38 37.15 0.31 0.45 16 4 C -0.14 0.06 8.84 37.16 0.33 0.39 16 5 O -0.36 -0.50 10.00 -35.23 -0.35 -0.85 16 6 C 0.07 -0.03 2.82 -25.92 -0.07 -0.10 16 7 H 0.09 -0.13 5.54 -51.93 -0.29 -0.41 16 8 C -0.17 0.05 7.71 -25.92 -0.20 -0.15 16 9 C 0.14 -0.06 4.27 -67.12 -0.29 -0.35 16 10 H 0.12 0.00 7.41 -51.93 -0.38 -0.39 16 11 N -0.70 -0.28 5.51 -53.06 -0.29 -0.57 16 12 C 0.39 0.67 7.49 -154.86 -1.16 -0.49 16 13 N -0.51 -0.80 9.13 -12.37 -0.11 -0.92 16 14 C 0.15 -0.01 9.84 -17.57 -0.17 -0.18 16 15 C -0.21 0.06 5.36 -104.47 -0.56 -0.50 16 16 C -0.06 0.07 2.82 36.00 0.10 0.17 16 17 O -0.53 -0.26 12.84 -35.23 -0.45 -0.72 16 18 Si 0.68 -1.32 29.91 -169.99 -5.08 -6.40 16 19 C -0.04 -0.03 9.82 -39.26 -0.39 -0.41 16 20 C -0.02 -0.04 7.35 -39.09 -0.29 -0.32 16 21 F -0.13 -0.34 16.65 2.25 0.04 -0.30 16 22 C -0.15 0.12 7.66 -25.92 -0.20 -0.07 16 23 H 0.06 -0.08 6.24 -51.93 -0.32 -0.41 16 24 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 25 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.06 -0.06 7.02 -51.93 -0.36 -0.42 16 29 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 30 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.09 0.07 8.14 -51.93 -0.42 -0.36 16 34 H 0.41 -0.15 8.20 -40.82 -0.33 -0.49 16 35 H 0.16 -0.36 4.84 -52.49 -0.25 -0.61 16 36 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16 37 H 0.38 -0.85 8.70 45.56 0.40 -0.46 16 38 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 39 H -0.26 0.07 7.01 56.52 0.40 0.46 16 40 H 0.15 -0.02 8.06 -52.49 -0.42 -0.45 16 41 H 0.09 -0.04 8.12 -51.93 -0.42 -0.46 16 42 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 343.52 15.07 5.18 5.18 Total: 0.00 -5.00 343.52 -9.69 -14.70 By element: Atomic # 1 Polarization: -2.67 SS G_CDS: -6.24 Total: -8.92 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -2.37 Total: -1.20 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: -0.41 Total: -1.49 kcal Atomic # 8 Polarization: -0.76 SS G_CDS: -0.80 Total: -1.56 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.04 Total: -0.30 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.08 Total: -6.40 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -5.00 -9.69 -14.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11572882_17656566.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.339 kcal (2) G-P(sol) polarization free energy of solvation -5.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.692 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds