Wall clock time and date at job start Mon Mar 8 2021 05:17:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00904 * 109.46967 * 2 1 4 4 C 1.46904 * 109.47296 * 119.99712 * 2 1 3 5 5 C 1.46897 * 109.47339 * 240.00069 * 2 1 3 6 6 H 1.09003 * 112.84604 * 288.80251 * 5 2 1 7 7 C 1.53781 * 113.61501 * 59.99636 * 5 2 1 8 8 C 1.53781 * 87.08070 * 140.06662 * 7 5 2 9 9 H 1.09002 * 113.61445 * 89.11830 * 8 7 5 10 10 C 1.53003 * 113.61337 * 219.93686 * 8 7 5 11 11 N 1.46504 * 109.46983 * 183.46996 * 10 8 7 12 12 C 1.38403 * 120.00101 * 179.97438 * 11 10 8 13 13 N 1.32498 * 119.21690 * 359.73933 * 12 11 10 14 14 C 1.32275 * 120.73933 * 179.71618 * 13 12 11 15 15 C 1.38599 * 119.19823 * 0.54091 * 14 13 12 16 16 C 1.50702 * 120.72024 * 179.75316 * 15 14 13 17 17 O 1.42902 * 109.46679 * 119.97914 * 16 15 14 18 18 Si 1.86297 * 109.47170 * 359.97438 * 16 15 14 19 19 C 1.38603 * 118.55654 * 359.72934 * 15 14 13 20 20 N 1.32275 * 119.20262 * 0.02562 * 19 15 14 21 21 C 1.53786 * 87.17350 * 334.52830 * 8 7 5 22 22 H 1.09001 * 109.47055 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.47017 * 300.00051 * 1 2 3 24 24 H 1.08998 * 109.46926 * 60.00406 * 1 2 3 25 25 H 1.08992 * 109.47044 * 180.02562 * 4 2 1 26 26 H 1.08997 * 109.46884 * 300.00441 * 4 2 1 27 27 H 1.09001 * 109.47112 * 59.99982 * 4 2 1 28 28 H 1.08999 * 113.61181 * 25.51718 * 7 5 2 29 29 H 1.09000 * 113.69133 * 254.62545 * 7 5 2 30 30 H 1.09000 * 109.47107 * 303.47037 * 10 8 7 31 31 H 1.08997 * 109.47112 * 63.47187 * 10 8 7 32 32 H 0.96999 * 119.99647 * 0.02562 * 11 10 8 33 33 H 1.08003 * 120.39749 * 180.29468 * 14 13 12 34 34 H 1.08998 * 109.46695 * 239.97489 * 16 15 14 35 35 H 0.96703 * 114.00103 * 299.99485 * 17 16 15 36 36 H 1.48501 * 109.99791 * 58.68137 * 18 16 15 37 37 H 1.48494 * 109.99904 * 179.97438 * 18 16 15 38 38 H 1.08004 * 120.40228 * 180.02562 * 19 15 14 39 39 H 1.08992 * 113.61675 * 140.02412 * 21 8 7 40 40 H 1.09000 * 113.60973 * 270.92699 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9588 -0.6924 1.1995 5 6 1.9587 -0.6925 -1.1994 6 1 1.7946 -1.7694 -1.1630 7 6 1.4998 -0.0435 -2.5159 8 6 2.9102 -0.3305 -3.0575 9 1 3.0062 -1.3085 -3.5291 10 6 3.4792 0.8013 -3.9155 11 7 4.7834 0.4009 -4.4495 12 6 5.4948 1.2678 -5.2607 13 7 4.9794 2.4540 -5.5486 14 6 5.6358 3.3081 -6.3162 15 6 6.8708 2.9447 -6.8295 16 6 7.6457 3.8889 -7.7123 17 8 8.9062 4.1814 -7.1061 18 14 6.6806 5.4673 -7.9314 19 6 7.3780 1.6943 -6.5129 20 7 6.6725 0.8896 -5.7355 21 6 3.3941 -0.3002 -1.5981 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 3.0487 -0.6920 1.1997 26 1 1.5954 -0.1786 2.0894 27 1 1.5954 -1.7201 1.1995 28 1 1.2753 1.0191 -2.4238 29 1 0.7142 -0.5994 -3.0276 30 1 2.7976 1.0102 -4.7400 31 1 3.5960 1.6966 -3.3049 32 1 5.1479 -0.4720 -4.2352 33 1 5.2126 4.2755 -6.5434 34 1 7.8092 3.4250 -8.6850 35 1 8.8371 4.5967 -6.2355 36 1 6.4235 6.0930 -6.6094 37 1 7.4343 6.4071 -8.7996 38 1 8.3378 1.3806 -6.8964 39 1 4.1368 -1.0641 -1.3684 40 1 3.6865 0.6924 -1.2556 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11760414_12175864.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:17:59 Heat of formation + Delta-G solvation = 185.686628 kcal Electronic energy + Delta-G solvation = -20037.895555 eV Core-core repulsion = 16975.192342 eV Total energy + Delta-G solvation = -3062.703213 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.161 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -44.90026 -42.95724 -40.77917 -39.01779 -37.49287 -35.57826 -33.65214 -32.12009 -30.96431 -28.89055 -28.66957 -27.22962 -26.76765 -25.55497 -23.95422 -23.35443 -20.96866 -20.64546 -19.96277 -19.68327 -19.55298 -18.89246 -18.67787 -17.57909 -17.19217 -16.98201 -16.88939 -16.55429 -16.29911 -16.26114 -15.99370 -15.97778 -15.82037 -15.57375 -15.40227 -15.32182 -14.89917 -14.70408 -14.18450 -13.91602 -13.74057 -13.59971 -12.97985 -12.70864 -12.51627 -12.34030 -11.48674 -10.90123 -10.11995 -5.70426 -1.47185 -0.81203 -0.71698 0.25662 0.46180 0.52454 0.62315 0.68754 0.83654 1.09762 1.15507 1.29128 1.50093 1.54827 1.66901 1.76163 1.86166 1.94885 2.04376 2.14787 2.27627 2.30525 2.33265 2.39314 2.49887 2.51386 2.59732 2.71025 2.78813 2.83117 2.87703 2.93093 3.01522 3.35782 3.38267 3.47865 3.82543 3.88979 4.28984 4.77658 5.00627 5.37821 5.64625 6.34771 Molecular weight = 266.16amu Principal moments of inertia in cm(-1) A = 0.037799 B = 0.003513 C = 0.003398 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 740.584155 B = 7968.672572 C = 8238.489350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.381 5.381 3 H 0.425 0.575 4 C -0.047 4.047 5 C -0.008 4.008 6 H 0.160 0.840 7 C -0.137 4.137 8 C -0.115 4.115 9 H 0.118 0.882 10 C 0.149 3.851 11 N -0.703 5.703 12 C 0.561 3.439 13 N -0.564 5.564 14 C 0.198 3.802 15 C -0.280 4.280 16 C -0.057 4.057 17 O -0.527 6.527 18 Si 0.679 3.321 19 C 0.224 3.776 20 N -0.566 5.566 21 C -0.144 4.144 22 H 0.122 0.878 23 H 0.124 0.876 24 H 0.123 0.877 25 H 0.122 0.878 26 H 0.124 0.876 27 H 0.122 0.878 28 H 0.109 0.891 29 H 0.107 0.893 30 H 0.079 0.921 31 H 0.071 0.929 32 H 0.415 0.585 33 H 0.170 0.830 34 H 0.124 0.876 35 H 0.376 0.624 36 H -0.258 1.258 37 H -0.250 1.250 38 H 0.174 0.826 39 H 0.104 0.896 40 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.453 -8.402 19.412 27.423 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.043 4.957 3 H 0.260 0.740 4 C -0.188 4.188 5 C -0.110 4.110 6 H 0.178 0.822 7 C -0.175 4.175 8 C -0.135 4.135 9 H 0.136 0.864 10 C 0.024 3.976 11 N -0.342 5.342 12 C 0.204 3.796 13 N -0.287 5.287 14 C 0.031 3.969 15 C -0.288 4.288 16 C -0.168 4.168 17 O -0.333 6.333 18 Si 0.579 3.421 19 C 0.056 3.944 20 N -0.287 5.287 21 C -0.182 4.182 22 H 0.140 0.860 23 H 0.142 0.858 24 H 0.141 0.859 25 H 0.140 0.860 26 H 0.142 0.858 27 H 0.140 0.860 28 H 0.127 0.873 29 H 0.126 0.874 30 H 0.097 0.903 31 H 0.089 0.911 32 H 0.253 0.747 33 H 0.186 0.814 34 H 0.141 0.859 35 H 0.223 0.777 36 H -0.183 1.183 37 H -0.174 1.174 38 H 0.191 0.809 39 H 0.122 0.878 40 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -18.060 -8.641 19.658 28.058 hybrid contribution 1.497 0.450 0.518 1.647 sum -16.562 -8.191 20.175 27.358 Atomic orbital electron populations 1.24096 0.75782 1.09659 1.09458 1.45264 1.16326 1.18570 1.15551 0.73985 1.24087 1.05725 1.02416 0.86616 1.25433 1.00267 1.01805 0.83514 0.82222 1.23513 0.99285 1.02959 0.91714 1.22630 0.94596 1.01944 0.94306 0.86413 1.21201 0.83811 0.95233 0.97345 1.43860 1.19857 1.17992 1.52455 1.19314 0.86160 0.86326 0.87775 1.67880 1.36858 1.03705 1.20231 1.22838 0.89509 0.97097 0.87419 1.21774 0.99675 0.99865 1.07463 1.24738 0.89058 1.05368 0.97635 1.86652 1.27367 1.82002 1.37246 0.95317 0.86881 0.76770 0.83104 1.22927 0.97106 0.87478 0.86858 1.67970 1.07481 1.37113 1.16123 1.23758 0.93041 1.04705 0.96685 0.85963 0.85767 0.85869 0.85966 0.85782 0.85990 0.87291 0.87419 0.90305 0.91084 0.74698 0.81353 0.85863 0.77652 1.18275 1.17403 0.80877 0.87760 0.87526 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.51 8.99 60.07 0.54 2.05 16 2 N -0.38 12.31 0.62 -242.02 -0.15 12.16 16 3 H 0.42 -14.34 8.20 -39.29 -0.32 -14.66 16 4 C -0.05 1.46 9.15 60.07 0.55 2.01 16 5 C -0.01 0.25 2.92 -66.76 -0.19 0.05 16 6 H 0.16 -4.81 8.11 -51.93 -0.42 -5.23 16 7 C -0.14 3.69 6.15 -25.92 -0.16 3.53 16 8 C -0.12 2.73 3.75 -89.80 -0.34 2.39 16 9 H 0.12 -2.68 8.14 -51.93 -0.42 -3.11 16 10 C 0.15 -2.78 5.47 -4.04 -0.02 -2.80 16 11 N -0.70 10.20 5.70 -62.30 -0.36 9.84 16 12 C 0.56 -5.59 8.43 -322.81 -2.72 -8.31 16 13 N -0.56 5.52 9.59 -13.93 -0.13 5.39 16 14 C 0.20 -2.01 9.92 -17.23 -0.17 -2.18 16 15 C -0.28 2.72 5.40 -104.35 -0.56 2.15 16 16 C -0.06 0.55 2.85 36.01 0.10 0.65 16 17 O -0.53 4.14 12.79 -35.23 -0.45 3.69 16 18 Si 0.68 -6.78 29.87 -169.99 -5.08 -11.85 16 19 C 0.22 -1.97 10.92 -17.23 -0.19 -2.15 16 20 N -0.57 4.66 10.46 -13.93 -0.15 4.51 16 21 C -0.14 3.83 7.14 -25.77 -0.18 3.64 16 22 H 0.12 -3.77 8.14 -51.93 -0.42 -4.20 16 23 H 0.12 -3.89 8.14 -51.93 -0.42 -4.31 16 24 H 0.12 -3.82 7.14 -51.93 -0.37 -4.19 16 25 H 0.12 -3.75 8.01 -51.93 -0.42 -4.17 16 26 H 0.12 -3.87 8.14 -51.93 -0.42 -4.29 16 27 H 0.12 -3.76 8.13 -51.93 -0.42 -4.18 16 28 H 0.11 -3.03 8.00 -51.93 -0.42 -3.44 16 29 H 0.11 -2.81 8.14 -51.93 -0.42 -3.23 16 30 H 0.08 -1.33 8.14 -51.93 -0.42 -1.76 16 31 H 0.07 -1.33 7.88 -51.93 -0.41 -1.74 16 32 H 0.42 -6.47 8.59 -40.82 -0.35 -6.82 16 33 H 0.17 -2.07 5.04 -52.48 -0.26 -2.33 16 34 H 0.12 -1.26 7.96 -51.93 -0.41 -1.68 16 35 H 0.38 -4.00 8.70 45.56 0.40 -3.61 16 36 H -0.26 2.18 7.11 56.52 0.40 2.58 16 37 H -0.25 1.43 7.11 56.52 0.40 1.83 16 38 H 0.17 -1.71 8.06 -52.48 -0.42 -2.13 16 39 H 0.10 -2.65 8.14 -51.93 -0.42 -3.07 16 40 H 0.11 -2.86 7.73 -51.93 -0.40 -3.26 16 LS Contribution 322.86 15.07 4.87 4.87 Total: 1.00 -36.15 322.86 -11.18 -47.34 By element: Atomic # 1 Polarization: -70.60 SS G_CDS: -6.39 Total: -76.99 kcal Atomic # 6 Polarization: 4.39 SS G_CDS: -3.35 Total: 1.04 kcal Atomic # 7 Polarization: 32.69 SS G_CDS: -0.78 Total: 31.91 kcal Atomic # 8 Polarization: 4.14 SS G_CDS: -0.45 Total: 3.69 kcal Atomic # 14 Polarization: -6.78 SS G_CDS: -5.08 Total: -11.85 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -36.15 -11.18 -47.34 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11760414_12175864.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 233.025 kcal (2) G-P(sol) polarization free energy of solvation -36.155 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 196.871 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.184 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.339 kcal (6) G-S(sol) free energy of system = (1) + (5) 185.687 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds