Wall clock time and date at job start Mon Mar 8 2021 05:17:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00904 * 109.46967 * 2 1 4 4 C 1.46904 * 109.47296 * 119.99712 * 2 1 3 5 5 C 1.46897 * 109.47339 * 240.00069 * 2 1 3 6 6 H 1.09003 * 112.84604 * 288.80251 * 5 2 1 7 7 C 1.53781 * 113.61501 * 59.99636 * 5 2 1 8 8 C 1.53781 * 87.08070 * 140.06662 * 7 5 2 9 9 H 1.09002 * 113.61445 * 89.11830 * 8 7 5 10 10 C 1.53003 * 113.61337 * 219.93686 * 8 7 5 11 11 N 1.46504 * 109.46983 * 183.46996 * 10 8 7 12 12 C 1.38403 * 120.00101 * 179.97438 * 11 10 8 13 13 N 1.32498 * 119.21690 * 359.73933 * 12 11 10 14 14 C 1.32275 * 120.73933 * 179.71618 * 13 12 11 15 15 C 1.38599 * 119.19823 * 0.54091 * 14 13 12 16 16 C 1.50702 * 120.72024 * 179.75316 * 15 14 13 17 17 O 1.42902 * 109.46679 * 119.97914 * 16 15 14 18 18 Si 1.86297 * 109.47170 * 359.97438 * 16 15 14 19 19 C 1.38603 * 118.55654 * 359.72934 * 15 14 13 20 20 N 1.32275 * 119.20262 * 0.02562 * 19 15 14 21 21 C 1.53786 * 87.17350 * 334.52830 * 8 7 5 22 22 H 1.09001 * 109.47055 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.47017 * 300.00051 * 1 2 3 24 24 H 1.08998 * 109.46926 * 60.00406 * 1 2 3 25 25 H 1.08992 * 109.47044 * 180.02562 * 4 2 1 26 26 H 1.08997 * 109.46884 * 300.00441 * 4 2 1 27 27 H 1.09001 * 109.47112 * 59.99982 * 4 2 1 28 28 H 1.08999 * 113.61181 * 25.51718 * 7 5 2 29 29 H 1.09000 * 113.69133 * 254.62545 * 7 5 2 30 30 H 1.09000 * 109.47107 * 303.47037 * 10 8 7 31 31 H 1.08997 * 109.47112 * 63.47187 * 10 8 7 32 32 H 0.96999 * 119.99647 * 0.02562 * 11 10 8 33 33 H 1.08003 * 120.39749 * 180.29468 * 14 13 12 34 34 H 1.08998 * 109.46695 * 239.97489 * 16 15 14 35 35 H 0.96703 * 114.00103 * 299.99485 * 17 16 15 36 36 H 1.48501 * 109.99791 * 58.68137 * 18 16 15 37 37 H 1.48494 * 109.99904 * 179.97438 * 18 16 15 38 38 H 1.08004 * 120.40228 * 180.02562 * 19 15 14 39 39 H 1.08992 * 113.61675 * 140.02412 * 21 8 7 40 40 H 1.09000 * 113.60973 * 270.92699 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9588 -0.6924 1.1995 5 6 1.9587 -0.6925 -1.1994 6 1 1.7946 -1.7694 -1.1630 7 6 1.4998 -0.0435 -2.5159 8 6 2.9102 -0.3305 -3.0575 9 1 3.0062 -1.3085 -3.5291 10 6 3.4792 0.8013 -3.9155 11 7 4.7834 0.4009 -4.4495 12 6 5.4948 1.2678 -5.2607 13 7 4.9794 2.4540 -5.5486 14 6 5.6358 3.3081 -6.3162 15 6 6.8708 2.9447 -6.8295 16 6 7.6457 3.8889 -7.7123 17 8 8.9062 4.1814 -7.1061 18 14 6.6806 5.4673 -7.9314 19 6 7.3780 1.6943 -6.5129 20 7 6.6725 0.8896 -5.7355 21 6 3.3941 -0.3002 -1.5981 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 3.0487 -0.6920 1.1997 26 1 1.5954 -0.1786 2.0894 27 1 1.5954 -1.7201 1.1995 28 1 1.2753 1.0191 -2.4238 29 1 0.7142 -0.5994 -3.0276 30 1 2.7976 1.0102 -4.7400 31 1 3.5960 1.6966 -3.3049 32 1 5.1479 -0.4720 -4.2352 33 1 5.2126 4.2755 -6.5434 34 1 7.8092 3.4250 -8.6850 35 1 8.8371 4.5967 -6.2355 36 1 6.4235 6.0930 -6.6094 37 1 7.4343 6.4071 -8.7996 38 1 8.3378 1.3806 -6.8964 39 1 4.1368 -1.0641 -1.3684 40 1 3.6865 0.6924 -1.2556 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_11760414_12175864.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:17:58 Heat of formation + Delta-G solvation = 161.827400 kcal Electronic energy + Delta-G solvation = -20038.930169 eV Core-core repulsion = 16975.192342 eV Total energy + Delta-G solvation = -3063.737827 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.161 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.58831 -42.09483 -38.87535 -38.13525 -36.28655 -34.77521 -32.68088 -29.64257 -29.35616 -26.94106 -26.53983 -26.14023 -25.65426 -23.71283 -23.02318 -21.38789 -19.45986 -18.83989 -18.48324 -18.27011 -17.74072 -17.14167 -16.78277 -16.58368 -16.15442 -15.93839 -15.81476 -15.53229 -14.75036 -14.59241 -14.07660 -13.88521 -13.81977 -13.66997 -13.55123 -13.29777 -13.20461 -13.13934 -12.87661 -12.35645 -12.20376 -11.93663 -11.84130 -11.77364 -11.66611 -11.25750 -10.74569 -10.12282 -9.14118 -4.95858 0.00910 0.06507 0.98566 1.27715 1.54590 1.79796 1.98192 2.57573 2.74860 2.88102 2.96728 3.11413 3.37725 3.40202 3.45661 3.57648 3.64073 3.68932 3.71174 3.82357 4.08376 4.18779 4.19685 4.27206 4.34548 4.37388 4.43146 4.54205 4.59693 4.71009 4.73476 4.76314 4.77836 4.82205 4.85027 4.89528 5.00085 5.15264 5.28151 5.73268 6.00272 6.33490 6.46031 7.22263 Molecular weight = 266.16amu Principal moments of inertia in cm(-1) A = 0.037799 B = 0.003513 C = 0.003398 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 740.584155 B = 7968.672572 C = 8238.489350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.366 5.366 3 H 0.435 0.565 4 C -0.047 4.047 5 C 0.022 3.978 6 H 0.170 0.830 7 C -0.131 4.131 8 C -0.125 4.125 9 H 0.108 0.892 10 C 0.144 3.856 11 N -0.692 5.692 12 C 0.547 3.453 13 N -0.571 5.571 14 C 0.196 3.804 15 C -0.284 4.284 16 C -0.060 4.060 17 O -0.548 6.548 18 Si 0.761 3.239 19 C 0.212 3.788 20 N -0.592 5.592 21 C -0.142 4.142 22 H 0.120 0.880 23 H 0.128 0.872 24 H 0.122 0.878 25 H 0.119 0.881 26 H 0.127 0.873 27 H 0.121 0.879 28 H 0.120 0.880 29 H 0.103 0.897 30 H 0.060 0.940 31 H 0.074 0.926 32 H 0.419 0.581 33 H 0.188 0.812 34 H 0.127 0.873 35 H 0.386 0.614 36 H -0.273 1.273 37 H -0.309 1.309 38 H 0.175 0.825 39 H 0.096 0.904 40 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.039 -8.813 21.094 29.750 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 N 0.057 4.943 3 H 0.273 0.727 4 C -0.189 4.189 5 C -0.081 4.081 6 H 0.187 0.813 7 C -0.170 4.170 8 C -0.144 4.144 9 H 0.126 0.874 10 C 0.021 3.979 11 N -0.329 5.329 12 C 0.190 3.810 13 N -0.294 5.294 14 C 0.029 3.971 15 C -0.292 4.292 16 C -0.170 4.170 17 O -0.356 6.356 18 Si 0.666 3.334 19 C 0.044 3.956 20 N -0.314 5.314 21 C -0.180 4.180 22 H 0.139 0.861 23 H 0.146 0.854 24 H 0.141 0.859 25 H 0.137 0.863 26 H 0.146 0.854 27 H 0.139 0.861 28 H 0.138 0.862 29 H 0.122 0.878 30 H 0.078 0.922 31 H 0.092 0.908 32 H 0.257 0.743 33 H 0.204 0.796 34 H 0.145 0.855 35 H 0.235 0.765 36 H -0.199 1.199 37 H -0.238 1.238 38 H 0.192 0.808 39 H 0.114 0.886 40 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -19.682 -9.089 21.383 30.450 hybrid contribution 1.990 0.585 0.002 2.074 sum -17.692 -8.503 21.385 29.028 Atomic orbital electron populations 1.24114 0.75704 1.09636 1.09613 1.45025 1.16088 1.18960 1.14237 0.72737 1.24089 1.05519 1.02529 0.86724 1.24964 0.97479 1.02154 0.83494 0.81266 1.23471 0.96819 1.03939 0.92721 1.22607 0.97305 0.99493 0.95030 0.87392 1.21458 0.81606 0.97555 0.97325 1.44218 1.20550 1.17385 1.50788 1.19778 0.86153 0.86970 0.88127 1.67962 1.36895 1.03907 1.20655 1.23155 0.89327 0.97697 0.86936 1.21662 0.99963 0.99555 1.07989 1.24867 0.88571 1.05786 0.97769 1.86614 1.28568 1.82292 1.38119 0.94414 0.85212 0.74092 0.79701 1.23058 0.97398 0.88010 0.87125 1.67999 1.08513 1.37753 1.17165 1.23680 0.94766 1.04981 0.94589 0.86129 0.85391 0.85943 0.86293 0.85437 0.86087 0.86209 0.87838 0.92187 0.90802 0.74295 0.79592 0.85527 0.76513 1.19930 1.23778 0.80769 0.88583 0.86936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.06 8.99 127.69 1.15 4.21 16 2 N -0.37 23.63 0.62 -919.62 -0.57 23.06 16 3 H 0.44 -29.48 8.20 -89.69 -0.74 -30.22 16 4 C -0.05 2.91 9.15 127.69 1.17 4.07 16 5 C 0.02 -1.28 2.92 45.53 0.13 -1.15 16 6 H 0.17 -10.22 8.11 -2.39 -0.02 -10.24 16 7 C -0.13 7.00 6.15 31.12 0.19 7.19 16 8 C -0.12 5.71 3.75 -10.26 -0.04 5.68 16 9 H 0.11 -4.70 8.14 -2.39 -0.02 -4.72 16 10 C 0.14 -5.07 5.47 86.38 0.47 -4.60 16 11 N -0.69 18.47 5.70 -351.03 -2.00 16.47 16 12 C 0.55 -9.62 8.43 261.49 2.20 -7.42 16 13 N -0.57 10.09 9.59 -197.99 -1.90 8.19 16 14 C 0.20 -3.67 9.92 84.71 0.84 -2.83 16 15 C -0.28 4.94 5.40 -19.69 -0.11 4.83 16 16 C -0.06 1.04 2.85 71.24 0.20 1.25 16 17 O -0.55 7.51 12.79 -148.98 -1.91 5.61 16 18 Si 0.76 -13.93 29.87 68.60 2.05 -11.88 16 19 C 0.21 -3.17 10.92 84.71 0.93 -2.25 16 20 N -0.59 8.22 10.46 -197.98 -2.07 6.15 16 21 C -0.14 7.43 7.14 31.21 0.22 7.66 16 22 H 0.12 -7.43 8.14 -2.39 -0.02 -7.45 16 23 H 0.13 -8.01 8.14 -2.39 -0.02 -8.03 16 24 H 0.12 -7.58 7.14 -2.39 -0.02 -7.59 16 25 H 0.12 -7.25 8.01 -2.39 -0.02 -7.27 16 26 H 0.13 -7.94 8.14 -2.39 -0.02 -7.95 16 27 H 0.12 -7.43 8.13 -2.39 -0.02 -7.45 16 28 H 0.12 -6.62 8.00 -2.39 -0.02 -6.64 16 29 H 0.10 -5.32 8.14 -2.39 -0.02 -5.34 16 30 H 0.06 -1.87 8.14 -2.39 -0.02 -1.89 16 31 H 0.07 -2.64 7.88 -2.39 -0.02 -2.66 16 32 H 0.42 -12.03 8.59 -92.71 -0.80 -12.83 16 33 H 0.19 -4.40 5.04 -2.91 -0.01 -4.42 16 34 H 0.13 -2.36 7.96 -2.39 -0.02 -2.38 16 35 H 0.39 -7.46 8.70 -74.06 -0.64 -8.11 16 36 H -0.27 4.35 7.11 99.48 0.71 5.05 16 37 H -0.31 2.54 7.11 99.48 0.71 3.25 16 38 H 0.18 -2.93 8.06 -2.91 -0.02 -2.95 16 39 H 0.10 -4.76 8.14 -2.39 -0.02 -4.78 16 40 H 0.11 -5.98 7.73 -2.39 -0.02 -5.99 16 Total: 1.00 -76.24 322.86 -0.12 -76.36 By element: Atomic # 1 Polarization: -139.51 SS G_CDS: -1.09 Total: -140.60 kcal Atomic # 6 Polarization: 9.28 SS G_CDS: 7.36 Total: 16.65 kcal Atomic # 7 Polarization: 60.41 SS G_CDS: -6.54 Total: 53.87 kcal Atomic # 8 Polarization: 7.51 SS G_CDS: -1.91 Total: 5.61 kcal Atomic # 14 Polarization: -13.93 SS G_CDS: 2.05 Total: -11.88 kcal Total: -76.24 -0.12 -76.36 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11760414_12175864.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 238.187 kcal (2) G-P(sol) polarization free energy of solvation -76.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 161.948 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.121 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -76.360 kcal (6) G-S(sol) free energy of system = (1) + (5) 161.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds