Wall clock time and date at job start Mon Mar 8 2021 05:18:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46894 * 1 3 3 H 1.00894 * 109.47482 * 2 1 4 4 C 1.46908 * 109.46829 * 119.99370 * 2 1 3 5 5 C 1.46900 * 109.47199 * 239.99347 * 2 1 3 6 6 H 1.09002 * 112.85077 * 311.19714 * 5 2 1 7 7 C 1.53956 * 113.66524 * 82.44203 * 5 2 1 8 8 C 1.53779 * 87.02051 * 139.93206 * 7 5 2 9 9 H 1.08994 * 113.61479 * 89.22577 * 8 7 5 10 10 C 1.53002 * 113.61646 * 220.04939 * 8 7 5 11 11 N 1.46491 * 109.46925 * 274.13731 * 10 8 7 12 12 C 1.39003 * 120.00072 * 179.97438 * 11 10 8 13 13 N 1.32399 * 119.71135 * 179.72492 * 12 11 10 14 14 C 1.31971 * 121.62708 * 180.28444 * 13 12 11 15 15 C 1.38023 * 120.85419 * 359.97438 * 14 13 12 16 16 C 1.50697 * 120.33303 * 180.02562 * 15 14 13 17 17 O 1.42896 * 109.46922 * 119.98099 * 16 15 14 18 18 Si 1.86300 * 109.47138 * 359.97438 * 16 15 14 19 19 C 1.38882 * 119.33171 * 0.02562 * 15 14 13 20 20 C 1.38298 * 118.50573 * 359.97438 * 19 15 14 21 21 C 1.53776 * 113.61309 * 180.02562 * 5 2 1 22 22 H 1.09006 * 109.47358 * 300.00233 * 1 2 3 23 23 H 1.08999 * 109.47032 * 60.00632 * 1 2 3 24 24 H 1.09004 * 109.47419 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.46843 * 179.97438 * 4 2 1 26 26 H 1.08993 * 109.47517 * 300.00022 * 4 2 1 27 27 H 1.09004 * 109.46818 * 60.00633 * 4 2 1 28 28 H 1.08998 * 113.61253 * 25.41312 * 7 5 2 29 29 H 1.08997 * 113.66765 * 254.46060 * 7 5 2 30 30 H 1.09005 * 109.46871 * 154.13419 * 10 8 7 31 31 H 1.09006 * 109.46689 * 34.13916 * 10 8 7 32 32 H 0.96998 * 120.00358 * 359.97438 * 11 10 8 33 33 H 1.07997 * 119.57222 * 180.02562 * 14 13 12 34 34 H 1.09000 * 109.47466 * 239.98634 * 16 15 14 35 35 H 0.96699 * 114.00253 * 300.00281 * 17 16 15 36 36 H 1.48505 * 110.00161 * 58.67885 * 18 16 15 37 37 H 1.48501 * 110.00052 * 179.97438 * 18 16 15 38 38 H 1.07999 * 120.74907 * 179.97438 * 19 15 14 39 39 H 1.07999 * 120.45548 * 179.97438 * 20 19 15 40 40 H 1.08995 * 113.62070 * 105.47229 * 21 5 2 41 41 H 1.09006 * 113.61895 * 334.56820 * 21 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 1 1.8053 0.9512 0.0000 4 6 1.9586 -0.6924 1.1996 5 6 1.9586 -0.6926 -1.1994 6 1 1.4760 -1.6570 -1.3579 7 6 1.9898 0.1956 -2.4565 8 6 3.3294 -0.4767 -2.8004 9 1 3.2228 -1.3818 -3.3982 10 6 4.3727 0.4892 -3.3655 11 7 4.1856 0.6181 -4.8127 12 6 5.0215 1.4483 -5.5504 13 7 4.8507 1.5563 -6.8589 14 6 5.6256 2.3289 -7.5965 15 6 6.6490 3.0575 -7.0247 16 6 7.5265 3.9365 -7.8781 17 8 7.4219 5.2901 -7.4323 18 14 6.9782 3.8235 -9.6550 19 6 6.8619 2.9722 -5.6549 20 6 6.0338 2.1544 -4.9079 21 6 3.4924 -0.7487 -1.2952 22 1 -0.3634 0.5139 0.8900 23 1 -0.3633 0.5137 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 3.0486 -0.6928 1.1994 26 1 1.5953 -0.1786 2.0895 27 1 1.5953 -1.7201 1.1996 28 1 2.0788 1.2595 -2.2372 29 1 1.1947 -0.0258 -3.1684 30 1 5.3720 0.1049 -3.1611 31 1 4.2558 1.4658 -2.8955 32 1 3.4784 0.1241 -5.2562 33 1 5.4564 2.3926 -8.6612 34 1 8.5619 3.6058 -7.7958 35 1 6.5260 5.6511 -7.4778 36 1 5.5583 4.2413 -9.7759 37 1 7.8354 4.6864 -10.5069 38 1 7.6562 3.5320 -5.1837 39 1 6.1714 2.0644 -3.8405 40 1 3.9083 -1.7310 -1.0714 41 1 3.9933 0.0566 -0.7577 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11760414_13915762.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:18:02 Heat of formation + Delta-G solvation = 168.624251 kcal Electronic energy + Delta-G solvation = -19888.739292 eV Core-core repulsion = 16890.722110 eV Total energy + Delta-G solvation = -2998.017182 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.166 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -44.94239 -42.28580 -40.77508 -38.87862 -37.35611 -34.32277 -32.87284 -32.15097 -30.75676 -28.87103 -28.69655 -26.98267 -26.02245 -25.36400 -23.43213 -23.24007 -20.98097 -20.42119 -19.68094 -19.59430 -19.28449 -18.79098 -18.31824 -17.27505 -17.25427 -16.88896 -16.72471 -16.54270 -16.28750 -16.21266 -15.96039 -15.85759 -15.72455 -15.57515 -15.30606 -15.04108 -14.86593 -14.82402 -14.22859 -13.99503 -13.79004 -13.63525 -13.16548 -12.59401 -12.21854 -11.61364 -11.24578 -11.22841 -9.72219 -5.57342 -1.50466 -0.63336 -0.44467 0.22641 0.43619 0.59158 0.65389 0.82594 0.97638 1.06407 1.13489 1.39446 1.46108 1.54577 1.64383 1.73099 1.83308 1.98860 2.01424 2.16438 2.25100 2.28182 2.33639 2.43622 2.47055 2.65852 2.67795 2.74301 2.79727 2.89604 2.95859 3.13525 3.18408 3.25009 3.32131 3.43490 3.79303 3.94315 4.13161 4.41241 4.57912 4.98237 5.43402 5.74149 6.23730 Molecular weight = 265.17amu Principal moments of inertia in cm(-1) A = 0.046444 B = 0.003331 C = 0.003277 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 602.738099 B = 8404.107041 C = 8542.734055 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 N -0.381 5.381 3 H 0.425 0.575 4 C -0.048 4.048 5 C -0.008 4.008 6 H 0.161 0.839 7 C -0.144 4.144 8 C -0.112 4.112 9 H 0.119 0.881 10 C 0.139 3.861 11 N -0.729 5.729 12 C 0.400 3.600 13 N -0.535 5.535 14 C 0.158 3.842 15 C -0.222 4.222 16 C -0.062 4.062 17 O -0.530 6.530 18 Si 0.678 3.322 19 C -0.005 4.005 20 C -0.238 4.238 21 C -0.138 4.138 22 H 0.124 0.876 23 H 0.122 0.878 24 H 0.122 0.878 25 H 0.122 0.878 26 H 0.124 0.876 27 H 0.122 0.878 28 H 0.106 0.894 29 H 0.104 0.896 30 H 0.074 0.926 31 H 0.066 0.934 32 H 0.407 0.593 33 H 0.159 0.841 34 H 0.120 0.880 35 H 0.375 0.625 36 H -0.258 1.258 37 H -0.252 1.252 38 H 0.138 0.862 39 H 0.130 0.870 40 H 0.107 0.893 41 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.470 -10.289 22.717 28.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 N 0.043 4.957 3 H 0.260 0.740 4 C -0.190 4.190 5 C -0.110 4.110 6 H 0.178 0.822 7 C -0.182 4.182 8 C -0.131 4.131 9 H 0.137 0.863 10 C 0.014 3.986 11 N -0.364 5.364 12 C 0.165 3.835 13 N -0.252 5.252 14 C 0.001 3.999 15 C -0.227 4.227 16 C -0.173 4.173 17 O -0.336 6.336 18 Si 0.579 3.421 19 C -0.031 4.031 20 C -0.263 4.263 21 C -0.176 4.176 22 H 0.142 0.858 23 H 0.141 0.859 24 H 0.140 0.860 25 H 0.141 0.859 26 H 0.143 0.857 27 H 0.141 0.859 28 H 0.125 0.875 29 H 0.123 0.877 30 H 0.092 0.908 31 H 0.085 0.915 32 H 0.243 0.757 33 H 0.176 0.824 34 H 0.137 0.863 35 H 0.223 0.777 36 H -0.182 1.182 37 H -0.177 1.177 38 H 0.156 0.844 39 H 0.148 0.852 40 H 0.126 0.874 41 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -14.859 -10.669 21.936 28.563 hybrid contribution -0.084 1.391 0.950 1.687 sum -14.943 -9.278 22.886 28.864 Atomic orbital electron populations 1.24093 0.75694 1.09607 1.09467 1.45263 1.16389 1.18519 1.15540 0.74019 1.24100 1.05791 1.02562 0.86554 1.25412 0.99994 1.01242 0.84344 0.82197 1.23732 1.00526 0.99537 0.94355 1.22580 0.94350 1.00557 0.95662 0.86315 1.21285 0.98630 0.98108 0.80535 1.44231 1.36493 1.49795 1.05928 1.18300 0.88290 0.88595 0.88274 1.67134 1.30236 1.22926 1.04869 1.22309 0.89006 0.89652 0.98972 1.21048 1.01312 1.04422 0.95935 1.24792 1.03345 0.81908 1.07223 1.86620 1.34325 1.25958 1.86687 0.95164 0.79979 0.91585 0.75405 1.21257 0.96097 0.93008 0.92763 1.21385 0.99766 1.04140 1.01005 1.23539 0.90516 1.06267 0.97309 0.85756 0.85940 0.85972 0.85911 0.85735 0.85939 0.87525 0.87699 0.90774 0.91545 0.75743 0.82419 0.86262 0.77708 1.18243 1.17697 0.84389 0.85232 0.87398 0.87384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.47 9.15 60.06 0.55 2.02 16 2 N -0.38 12.44 0.62 -242.08 -0.15 12.29 16 3 H 0.42 -14.50 8.20 -39.29 -0.32 -14.82 16 4 C -0.05 1.53 8.99 60.07 0.54 2.07 16 5 C -0.01 0.24 2.92 -66.81 -0.19 0.05 16 6 H 0.16 -4.86 8.11 -51.93 -0.42 -5.28 16 7 C -0.14 3.87 7.13 -25.83 -0.18 3.69 16 8 C -0.11 2.72 3.75 -89.78 -0.34 2.38 16 9 H 0.12 -2.74 8.14 -51.93 -0.42 -3.16 16 10 C 0.14 -2.78 4.72 -4.05 -0.02 -2.80 16 11 N -0.73 11.13 5.73 -60.42 -0.35 10.78 16 12 C 0.40 -4.32 7.65 -155.02 -1.19 -5.50 16 13 N -0.54 4.39 10.39 -12.44 -0.13 4.26 16 14 C 0.16 -1.34 9.84 -17.57 -0.17 -1.51 16 15 C -0.22 1.97 5.40 -104.46 -0.56 1.41 16 16 C -0.06 0.53 2.84 36.00 0.10 0.63 16 17 O -0.53 3.65 12.78 -35.23 -0.45 3.20 16 18 Si 0.68 -5.72 29.82 -169.99 -5.07 -10.79 16 19 C -0.01 0.05 9.77 -39.32 -0.38 -0.33 16 20 C -0.24 2.69 9.33 -39.22 -0.37 2.32 16 21 C -0.14 3.81 6.15 -25.90 -0.16 3.65 16 22 H 0.12 -3.91 8.14 -51.93 -0.42 -4.33 16 23 H 0.12 -3.79 8.01 -51.93 -0.42 -4.20 16 24 H 0.12 -3.79 8.13 -51.93 -0.42 -4.22 16 25 H 0.12 -3.85 7.13 -51.93 -0.37 -4.22 16 26 H 0.12 -3.93 8.14 -51.93 -0.42 -4.36 16 27 H 0.12 -3.81 8.14 -51.93 -0.42 -4.23 16 28 H 0.11 -2.92 7.72 -51.93 -0.40 -3.32 16 29 H 0.10 -2.68 8.14 -51.93 -0.42 -3.10 16 30 H 0.07 -1.41 7.93 -51.93 -0.41 -1.82 16 31 H 0.07 -1.38 7.66 -51.93 -0.40 -1.78 16 32 H 0.41 -6.35 8.60 -40.82 -0.35 -6.71 16 33 H 0.16 -1.55 4.88 -52.49 -0.26 -1.80 16 34 H 0.12 -1.08 7.96 -51.93 -0.41 -1.49 16 35 H 0.38 -3.63 8.70 45.56 0.40 -3.23 16 36 H -0.26 1.70 7.11 56.52 0.40 2.10 16 37 H -0.25 1.12 7.11 56.52 0.40 1.52 16 38 H 0.14 -1.43 8.06 -52.49 -0.42 -1.85 16 39 H 0.13 -1.82 6.71 -52.49 -0.35 -2.17 16 40 H 0.11 -2.87 8.14 -51.93 -0.42 -3.29 16 41 H 0.11 -3.08 8.00 -51.93 -0.42 -3.50 16 LS Contribution 325.82 15.07 4.91 4.91 Total: 1.00 -36.20 325.82 -10.32 -46.52 By element: Atomic # 1 Polarization: -72.55 SS G_CDS: -6.71 Total: -79.26 kcal Atomic # 6 Polarization: 10.45 SS G_CDS: -2.37 Total: 8.07 kcal Atomic # 7 Polarization: 27.96 SS G_CDS: -0.63 Total: 27.34 kcal Atomic # 8 Polarization: 3.65 SS G_CDS: -0.45 Total: 3.20 kcal Atomic # 14 Polarization: -5.72 SS G_CDS: -5.07 Total: -10.79 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -36.20 -10.32 -46.52 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11760414_13915762.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 215.148 kcal (2) G-P(sol) polarization free energy of solvation -36.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 178.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.320 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.524 kcal (6) G-S(sol) free energy of system = (1) + (5) 168.624 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds