Wall clock time and date at job start Mon Mar 8 2021 05:18:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33330 * 125.94995 * 2 1 4 4 C 1.50698 * 122.70970 * 359.96842 * 3 2 1 5 5 O 1.42899 * 109.47211 * 329.99295 * 4 3 2 6 6 Si 1.86298 * 109.46823 * 209.99520 * 4 3 2 7 7 N 1.32119 * 114.57801 * 179.78988 * 3 2 1 8 8 C 1.29689 * 116.86437 * 0.51639 * 7 3 2 9 9 N 1.38618 * 124.94915 * 179.71194 * 8 7 3 10 10 C 1.46502 * 119.99978 * 180.02562 * 9 8 7 11 11 C 1.53002 * 109.46820 * 180.02562 * 10 9 8 12 12 H 1.08994 * 112.84732 * 316.19496 * 11 10 9 13 13 C 1.53787 * 113.61148 * 185.00077 * 11 10 9 14 14 C 1.53784 * 87.07681 * 220.01680 * 13 11 10 15 15 H 1.08994 * 113.61079 * 270.88087 * 14 13 11 16 16 N 1.46902 * 113.60775 * 140.06441 * 14 13 11 17 17 H 1.00890 * 109.47667 * 299.99564 * 16 14 13 18 18 C 1.46900 * 109.47205 * 60.00119 * 16 14 13 19 19 C 1.46906 * 109.46695 * 179.97438 * 16 14 13 20 20 C 1.53775 * 113.61394 * 87.50116 * 11 10 9 21 21 S 1.70968 * 110.10458 * 359.72434 * 8 7 3 22 22 H 1.09002 * 109.47152 * 179.71292 * 1 2 3 23 23 H 1.09001 * 109.46980 * 59.71392 * 1 2 3 24 24 H 1.09004 * 109.47113 * 299.71373 * 1 2 3 25 25 H 1.09000 * 109.47546 * 89.99738 * 4 3 2 26 26 H 0.96701 * 114.00118 * 300.00202 * 5 4 3 27 27 H 1.48500 * 110.00352 * 179.97438 * 6 4 3 28 28 H 1.48497 * 110.00422 * 301.31670 * 6 4 3 29 29 H 0.96993 * 119.99650 * 0.03733 * 9 8 7 30 30 H 1.09003 * 109.46826 * 300.00580 * 10 9 8 31 31 H 1.09002 * 109.47007 * 60.00497 * 10 9 8 32 32 H 1.08998 * 113.61010 * 334.56604 * 13 11 10 33 33 H 1.08998 * 113.61208 * 105.38401 * 13 11 10 34 34 H 1.08997 * 109.46984 * 179.97438 * 18 16 14 35 35 H 1.09004 * 109.47063 * 299.99631 * 18 16 14 36 36 H 1.09003 * 109.46988 * 59.99699 * 18 16 14 37 37 H 1.09002 * 109.46970 * 60.00260 * 19 16 14 38 38 H 1.08997 * 109.47205 * 180.02562 * 19 16 14 39 39 H 1.09003 * 109.47133 * 300.00576 * 19 16 14 40 40 H 1.08997 * 113.61711 * 254.52675 * 20 11 10 41 41 H 1.08997 * 113.61770 * 25.43703 * 20 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4830 -0.0007 5 8 0.4817 2.5019 -0.6750 6 14 2.9327 3.6146 -0.8786 7 7 3.5850 0.8188 0.0044 8 6 3.9315 -0.4309 -0.0023 9 7 5.2385 -0.8926 -0.0049 10 6 5.5066 -2.3328 -0.0132 11 6 7.0181 -2.5702 -0.0138 12 1 7.5490 -1.9156 -0.7050 13 6 7.4089 -4.0517 -0.1451 14 6 8.5127 -3.7708 0.8882 15 1 9.4532 -3.4443 0.4445 16 7 8.6888 -4.8500 1.8691 17 1 7.8281 -4.9863 2.3775 18 6 9.0473 -6.0921 1.1715 19 6 9.7602 -4.4891 2.8071 20 6 7.6355 -2.6133 1.3939 21 16 2.5413 -1.4261 -0.0078 22 1 -0.3633 -1.0277 -0.0051 23 1 -0.3633 0.5183 -0.8874 24 1 -0.3633 0.5094 0.8926 25 1 1.6086 2.8218 1.0268 26 1 0.5244 2.2118 -1.5965 27 1 2.4033 5.0020 -0.8868 28 1 4.2561 3.5796 -0.2059 29 1 5.9755 -0.2620 -0.0011 30 1 5.0678 -2.7892 0.8742 31 1 5.0681 -2.7789 -0.9058 32 1 6.6416 -4.7389 0.2114 33 1 7.7896 -4.3171 -1.1314 34 1 9.1784 -6.8928 1.8993 35 1 8.2526 -6.3601 0.4752 36 1 9.9773 -5.9449 0.6222 37 1 9.4946 -3.5673 3.3248 38 1 9.8913 -5.2900 3.5347 39 1 10.6900 -4.3421 2.2576 40 1 8.2005 -1.7172 1.6505 41 1 6.9302 -2.9073 2.1712 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11760414_15704122.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:18:08 Heat of formation + Delta-G solvation = 174.569141 kcal Electronic energy + Delta-G solvation = -20474.824495 eV Core-core repulsion = 17410.679730 eV Total energy + Delta-G solvation = -3064.144765 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.138 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -44.98002 -41.89108 -40.88674 -38.73306 -37.36915 -33.71929 -32.16897 -31.42168 -29.86265 -28.83215 -28.54239 -26.44366 -25.89498 -25.02737 -23.55515 -21.58496 -20.99180 -20.35068 -19.92448 -19.64520 -18.87320 -18.56352 -18.17952 -17.57329 -17.29656 -16.88921 -16.36062 -16.30310 -16.26078 -16.09962 -15.88685 -15.88472 -15.63222 -15.47350 -15.07299 -14.88451 -14.59594 -14.47391 -14.26702 -14.16867 -13.89973 -13.68242 -13.47860 -12.98380 -12.52443 -12.00915 -11.43262 -11.12337 -10.78146 -9.57421 -5.50791 -1.52747 -0.84121 -0.72964 -0.10990 0.19599 0.40588 0.56439 0.67232 0.71720 1.02286 1.09893 1.12655 1.27593 1.41966 1.47294 1.55557 1.62925 1.70707 1.81644 1.98955 2.09369 2.23573 2.26517 2.29992 2.36445 2.40927 2.60195 2.62831 2.75375 2.78328 2.83960 3.05599 3.23332 3.39294 3.56858 3.84222 4.08632 4.11826 4.23130 4.48578 4.59783 5.17984 5.80668 6.10036 Molecular weight = 285.14amu Principal moments of inertia in cm(-1) A = 0.030853 B = 0.003555 C = 0.003318 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 907.311140 B = 7874.328671 C = 8437.022601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 C -0.224 4.224 3 C 0.064 3.936 4 C -0.034 4.034 5 O -0.533 6.533 6 Si 0.717 3.283 7 N -0.534 5.534 8 C 0.306 3.694 9 N -0.701 5.701 10 C 0.134 3.866 11 C -0.110 4.110 12 H 0.121 0.879 13 C -0.138 4.138 14 C -0.007 4.007 15 H 0.161 0.839 16 N -0.381 5.381 17 H 0.425 0.575 18 C -0.048 4.048 19 C -0.047 4.047 20 C -0.145 4.145 21 S 0.098 5.902 22 H 0.059 0.941 23 H 0.087 0.913 24 H 0.078 0.922 25 H 0.121 0.879 26 H 0.380 0.620 27 H -0.259 1.259 28 H -0.254 1.254 29 H 0.413 0.587 30 H 0.070 0.930 31 H 0.078 0.922 32 H 0.109 0.891 33 H 0.109 0.891 34 H 0.124 0.876 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.124 0.876 39 H 0.122 0.878 40 H 0.105 0.895 41 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 20.249 -21.157 4.512 29.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.346 4.346 3 C -0.066 4.066 4 C -0.148 4.148 5 O -0.338 6.338 6 Si 0.617 3.383 7 N -0.259 5.259 8 C -0.065 4.065 9 N -0.344 5.344 10 C 0.009 3.991 11 C -0.129 4.129 12 H 0.139 0.861 13 C -0.176 4.176 14 C -0.109 4.109 15 H 0.179 0.821 16 N 0.043 4.957 17 H 0.260 0.740 18 C -0.190 4.190 19 C -0.189 4.189 20 C -0.183 4.183 21 S 0.346 5.654 22 H 0.078 0.922 23 H 0.106 0.894 24 H 0.097 0.903 25 H 0.139 0.861 26 H 0.227 0.773 27 H -0.184 1.184 28 H -0.178 1.178 29 H 0.251 0.749 30 H 0.088 0.912 31 H 0.096 0.904 32 H 0.127 0.873 33 H 0.127 0.873 34 H 0.143 0.857 35 H 0.141 0.859 36 H 0.141 0.859 37 H 0.141 0.859 38 H 0.143 0.857 39 H 0.140 0.860 40 H 0.124 0.876 41 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 21.081 -21.087 5.020 30.237 hybrid contribution -0.256 0.589 0.822 1.043 sum 20.825 -20.498 5.842 29.799 Atomic orbital electron populations 1.20231 0.85969 1.01947 1.04238 1.25211 1.01547 0.92193 1.15681 1.20186 0.86502 0.97464 1.02449 1.24553 0.92621 0.95160 1.02425 1.86559 1.28652 1.89526 1.29064 0.94119 0.77280 0.77160 0.89741 1.65943 1.17534 1.16630 1.25830 1.23172 0.91449 0.91745 1.00093 1.43616 1.02190 1.06258 1.82350 1.21417 0.93936 0.80862 1.02888 1.22529 0.96230 0.96985 0.97193 0.86062 1.23542 0.95829 0.98112 1.00140 1.25354 1.04474 0.88864 0.92227 0.82138 1.45259 1.18458 1.15632 1.16361 0.73991 1.24105 1.07741 0.84906 1.02267 1.24100 0.91842 1.07565 0.95369 1.23721 0.98043 0.97657 0.98850 1.83879 0.96662 1.10928 1.73908 0.92158 0.89438 0.90330 0.86149 0.77256 1.18411 1.17782 0.74909 0.91167 0.90364 0.87279 0.87252 0.85710 0.85882 0.85925 0.85938 0.85722 0.85957 0.87622 0.87434 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.57 8.92 36.01 0.32 0.89 16 2 C -0.22 1.85 6.50 -36.02 -0.23 1.61 16 3 C 0.06 -0.47 5.91 -84.18 -0.50 -0.97 16 4 C -0.03 0.25 2.94 36.00 0.11 0.36 16 5 O -0.53 4.14 10.17 -35.23 -0.36 3.78 16 6 Si 0.72 -5.12 32.09 -169.99 -5.45 -10.57 16 7 N -0.53 4.05 8.95 -11.36 -0.10 3.95 16 8 C 0.31 -3.27 8.24 -87.67 -0.72 -3.99 16 9 N -0.70 10.77 5.71 -62.29 -0.36 10.42 16 10 C 0.13 -2.69 5.37 -4.04 -0.02 -2.71 16 11 C -0.11 2.70 3.75 -89.81 -0.34 2.37 16 12 H 0.12 -2.86 8.14 -51.93 -0.42 -3.29 16 13 C -0.14 3.85 6.15 -25.91 -0.16 3.69 16 14 C -0.01 0.22 2.91 -66.90 -0.19 0.03 16 15 H 0.16 -4.92 8.11 -51.93 -0.42 -5.34 16 16 N -0.38 12.52 0.62 -242.18 -0.15 12.37 16 17 H 0.42 -14.60 8.20 -39.30 -0.32 -14.92 16 18 C -0.05 1.54 8.99 60.06 0.54 2.08 16 19 C -0.05 1.48 9.15 60.07 0.55 2.03 16 20 C -0.15 3.94 7.12 -25.92 -0.18 3.76 16 21 S 0.10 -1.06 22.32 -107.50 -2.40 -3.46 16 22 H 0.06 -0.57 8.14 -51.93 -0.42 -0.99 16 23 H 0.09 -0.83 6.37 -51.93 -0.33 -1.16 16 24 H 0.08 -0.62 8.14 -51.93 -0.42 -1.04 16 25 H 0.12 -0.81 7.96 -51.93 -0.41 -1.23 16 26 H 0.38 -4.28 8.13 45.56 0.37 -3.91 16 27 H -0.26 1.00 7.11 56.52 0.40 1.41 16 28 H -0.25 1.09 7.11 56.52 0.40 1.49 16 29 H 0.41 -6.55 8.60 -40.82 -0.35 -6.90 16 30 H 0.07 -1.46 7.84 -51.93 -0.41 -1.87 16 31 H 0.08 -1.50 8.14 -51.93 -0.42 -1.93 16 32 H 0.11 -3.14 8.00 -51.93 -0.42 -3.56 16 33 H 0.11 -2.95 8.14 -51.93 -0.42 -3.37 16 34 H 0.12 -3.96 8.14 -51.93 -0.42 -4.39 16 35 H 0.12 -3.88 7.14 -51.93 -0.37 -4.25 16 36 H 0.12 -3.84 8.14 -51.93 -0.42 -4.26 16 37 H 0.12 -3.80 8.01 -51.93 -0.42 -4.22 16 38 H 0.12 -3.93 8.14 -51.93 -0.42 -4.36 16 39 H 0.12 -3.82 8.13 -51.93 -0.42 -4.24 16 40 H 0.11 -2.73 8.14 -51.93 -0.42 -3.15 16 41 H 0.11 -2.97 7.70 -51.93 -0.40 -3.37 16 LS Contribution 337.50 15.07 5.09 5.09 Total: 1.00 -36.64 337.50 -11.47 -48.11 By element: Atomic # 1 Polarization: -71.94 SS G_CDS: -6.90 Total: -78.85 kcal Atomic # 6 Polarization: 9.99 SS G_CDS: -0.84 Total: 9.16 kcal Atomic # 7 Polarization: 27.35 SS G_CDS: -0.61 Total: 26.74 kcal Atomic # 8 Polarization: 4.14 SS G_CDS: -0.36 Total: 3.78 kcal Atomic # 14 Polarization: -5.12 SS G_CDS: -5.45 Total: -10.57 kcal Atomic # 16 Polarization: -1.06 SS G_CDS: -2.40 Total: -3.46 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -36.64 -11.47 -48.11 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11760414_15704122.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 222.683 kcal (2) G-P(sol) polarization free energy of solvation -36.642 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 186.041 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.471 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.114 kcal (6) G-S(sol) free energy of system = (1) + (5) 174.569 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds