Wall clock time and date at job start Mon Mar 8 2021 03:27:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86301 * 109.47006 * 2 1 4 4 C 1.50694 * 109.47036 * 239.99861 * 2 1 3 5 5 C 1.38607 * 120.71990 * 119.72180 * 4 2 1 6 6 N 1.32277 * 119.19915 * 179.71364 * 5 4 2 7 7 C 1.32492 * 120.73958 * 0.57025 * 6 5 4 8 8 N 1.38409 * 119.21993 * 179.72409 * 7 6 5 9 9 C 1.46494 * 119.99707 * 359.97438 * 8 7 6 10 10 H 1.09002 * 112.85312 * 23.80203 * 9 8 7 11 11 C 1.53790 * 113.61323 * 154.99869 * 9 8 7 12 12 C 1.53778 * 87.07905 * 139.97953 * 11 9 8 13 13 H 1.09002 * 113.60998 * 220.01654 * 12 11 9 14 14 O 1.42898 * 113.61695 * 89.20035 * 12 11 9 15 15 C 1.35901 * 117.00197 * 156.67975 * 14 12 11 16 16 C 1.38731 * 120.05621 * 5.43530 * 15 14 12 17 17 C 1.38146 * 119.94527 * 179.74102 * 16 15 14 18 18 C 1.38262 * 120.05299 * 0.51038 * 17 16 15 19 19 C 1.38267 * 120.11545 * 359.76673 * 18 17 16 20 20 C 1.38149 * 120.05109 * 359.97438 * 19 18 17 21 21 C 1.53780 * 113.61366 * 252.49348 * 9 8 7 22 22 N 1.32502 * 121.56474 * 359.70355 * 7 6 5 23 23 C 1.32271 * 120.73764 * 0.02562 * 22 7 6 24 24 H 0.96696 * 114.00059 * 60.00255 * 1 2 3 25 25 H 1.08995 * 109.46948 * 119.99902 * 2 1 3 26 26 H 1.48498 * 110.00022 * 59.99738 * 3 2 1 27 27 H 1.48500 * 110.00028 * 181.31918 * 3 2 1 28 28 H 1.08003 * 120.40271 * 359.97438 * 5 4 2 29 29 H 0.97001 * 119.99507 * 179.97438 * 8 7 6 30 30 H 1.09000 * 113.61027 * 254.52666 * 11 9 8 31 31 H 1.08993 * 113.61133 * 25.43158 * 11 9 8 32 32 H 1.08002 * 120.02420 * 359.97438 * 16 15 14 33 33 H 1.07998 * 119.97323 * 180.23253 * 17 16 15 34 34 H 1.08003 * 119.94729 * 179.74373 * 18 17 16 35 35 H 1.07997 * 119.97617 * 179.97438 * 19 18 17 36 36 H 1.08004 * 120.02612 * 179.97438 * 20 19 18 37 37 H 1.09000 * 113.61658 * 334.56840 * 21 9 8 38 38 H 1.09003 * 113.61748 * 105.47033 * 21 9 8 39 39 H 1.08004 * 120.40201 * 180.02562 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7243 -0.0496 -2.1554 6 7 3.1534 -0.7039 -3.2220 7 6 2.8239 -1.9724 -3.4162 8 7 3.2857 -2.6250 -4.5461 9 6 4.1278 -1.9130 -5.5104 10 1 4.6531 -1.0659 -5.0692 11 6 5.0364 -2.8389 -6.3364 12 6 4.7157 -1.9447 -7.5456 13 1 4.5637 -2.5000 -8.4712 14 8 5.6157 -0.8455 -7.6995 15 6 5.7287 -0.3100 -8.9434 16 6 4.9077 -0.7556 -9.9690 17 6 5.0208 -0.2059 -11.2313 18 6 5.9586 0.7803 -11.4755 19 6 6.7821 1.2222 -10.4565 20 6 6.6692 0.6794 -9.1912 21 6 3.4074 -1.5759 -6.8265 22 7 2.0631 -2.6312 -2.5543 23 6 1.6054 -2.0370 -1.4649 24 1 -0.3933 0.4416 -0.7650 25 1 1.7923 -0.5138 0.8900 26 1 1.5615 2.4679 1.2084 27 1 3.5346 1.7703 -0.0321 28 1 2.9922 0.9858 -2.0051 29 1 3.0516 -3.5538 -4.6993 30 1 6.0832 -2.8062 -6.0345 31 1 4.6536 -3.8551 -6.4312 32 1 4.1780 -1.5291 -9.7797 33 1 4.3793 -0.5499 -12.0291 34 1 6.0485 1.2059 -12.4641 35 1 7.5141 1.9923 -10.6499 36 1 7.3129 1.0246 -8.3956 37 1 2.5793 -2.2468 -7.0553 38 1 3.1391 -0.5236 -6.9204 39 1 0.9860 -2.5793 -0.7658 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11987232_12175864.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:27:20 Heat of formation + Delta-G solvation = 58.644221 kcal Electronic energy + Delta-G solvation = -23011.745975 eV Core-core repulsion = 19502.103924 eV Total energy + Delta-G solvation = -3509.642051 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.126 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.13325 -41.51761 -39.77400 -38.16712 -37.50057 -35.21363 -34.65501 -32.13850 -31.85466 -30.61088 -27.17559 -26.93265 -26.00803 -25.32156 -23.56869 -23.32277 -22.88682 -20.85602 -19.45514 -19.33464 -18.58995 -18.03517 -17.12838 -16.92045 -16.68972 -16.54846 -16.16189 -15.98085 -15.83180 -15.55172 -15.28109 -15.23647 -14.59129 -14.37272 -14.05448 -13.93693 -13.79389 -13.59551 -13.35128 -13.01189 -12.67777 -12.50194 -12.19272 -12.13514 -11.84102 -11.75740 -11.60952 -11.38460 -11.19566 -10.58714 -9.99790 -9.94125 -9.16572 -9.08623 -5.10627 0.07067 0.17452 0.40072 0.50753 1.22768 1.56007 1.80957 1.92342 2.03565 2.81459 2.85113 3.14039 3.28890 3.34395 3.40071 3.61475 3.67295 3.71084 3.73261 3.84319 3.89841 3.98389 4.12306 4.22118 4.28573 4.44692 4.46405 4.48780 4.53381 4.62494 4.68041 4.71133 4.81554 4.87702 4.95810 5.07144 5.29759 5.36551 5.48439 5.62136 5.77719 5.84260 6.00960 6.40408 6.45788 6.50990 7.30125 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.046 4.046 3 Si 0.681 3.319 4 C -0.294 4.294 5 C 0.199 3.801 6 N -0.561 5.561 7 C 0.567 3.433 8 N -0.686 5.686 9 C 0.146 3.854 10 H 0.127 0.873 11 C -0.143 4.143 12 C 0.059 3.941 13 H 0.095 0.905 14 O -0.292 6.292 15 C 0.129 3.871 16 C -0.209 4.209 17 C -0.081 4.081 18 C -0.158 4.158 19 C -0.080 4.080 20 C -0.152 4.152 21 C -0.171 4.171 22 N -0.569 5.569 23 C 0.223 3.777 24 H 0.379 0.621 25 H 0.116 0.884 26 H -0.250 1.250 27 H -0.255 1.255 28 H 0.166 0.834 29 H 0.415 0.585 30 H 0.090 0.910 31 H 0.105 0.895 32 H 0.129 0.871 33 H 0.125 0.875 34 H 0.124 0.876 35 H 0.130 0.870 36 H 0.131 0.869 37 H 0.098 0.902 38 H 0.084 0.916 39 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.687 0.606 -2.974 3.111 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.158 4.158 3 Si 0.583 3.417 4 C -0.303 4.303 5 C 0.031 3.969 6 N -0.282 5.282 7 C 0.211 3.789 8 N -0.321 5.321 9 C 0.040 3.960 10 H 0.144 0.856 11 C -0.181 4.181 12 C 0.001 3.999 13 H 0.113 0.887 14 O -0.206 6.206 15 C 0.084 3.916 16 C -0.228 4.228 17 C -0.099 4.099 18 C -0.176 4.176 19 C -0.098 4.098 20 C -0.171 4.171 21 C -0.210 4.210 22 N -0.291 5.291 23 C 0.055 3.945 24 H 0.226 0.774 25 H 0.133 0.867 26 H -0.175 1.175 27 H -0.180 1.180 28 H 0.183 0.817 29 H 0.252 0.748 30 H 0.108 0.892 31 H 0.123 0.877 32 H 0.147 0.853 33 H 0.143 0.857 34 H 0.142 0.858 35 H 0.148 0.852 36 H 0.149 0.851 37 H 0.116 0.884 38 H 0.102 0.898 39 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 0.454 0.550 -2.773 2.864 hybrid contribution -0.485 -0.692 0.694 1.094 sum -0.031 -0.142 -2.079 2.084 Atomic orbital electron populations 1.86506 1.17144 1.81633 1.49300 1.24696 0.85092 1.09607 0.96418 0.94942 0.81073 0.77827 0.87885 1.21718 1.08092 0.98476 1.01966 1.22798 0.88520 0.98835 0.86733 1.67910 1.27994 1.08507 1.23827 1.19430 0.86813 0.85710 0.86946 1.44211 1.53725 1.14426 1.19753 1.22577 0.90861 0.96044 0.86480 0.85551 1.23630 1.02063 0.98469 0.93916 1.23107 0.90288 0.87653 0.98808 0.88702 1.86081 1.60931 1.46546 1.27015 1.19016 0.94878 0.93954 0.83733 1.21282 1.02990 1.04464 0.94019 1.20995 0.97343 0.95441 0.96083 1.21132 0.97607 0.99231 0.99669 1.21028 0.98313 0.98566 0.91938 1.20491 0.99849 0.98553 0.98167 1.24067 0.96985 1.03858 0.96083 1.68001 1.16108 1.39278 1.05700 1.22833 0.90252 0.90585 0.90874 0.77354 0.86689 1.17499 1.17974 0.81709 0.74754 0.89170 0.87706 0.85319 0.85714 0.85779 0.85213 0.85119 0.88396 0.89766 0.81233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.38 12.79 -35.23 -0.45 -0.07 16 2 C -0.05 0.05 2.85 36.00 0.10 0.15 16 3 Si 0.68 -1.21 29.87 -169.99 -5.08 -6.28 16 4 C -0.29 -0.01 5.40 -104.35 -0.56 -0.57 16 5 C 0.20 0.11 9.92 -17.22 -0.17 -0.06 16 6 N -0.56 -1.42 9.13 -13.93 -0.13 -1.55 16 7 C 0.57 1.47 8.43 -322.80 -2.72 -1.25 16 8 N -0.69 -0.23 5.50 -55.00 -0.30 -0.54 16 9 C 0.15 -0.05 4.19 -67.12 -0.28 -0.33 16 10 H 0.13 0.19 7.37 -51.93 -0.38 -0.19 16 11 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 12 C 0.06 -0.05 3.75 -25.92 -0.10 -0.15 16 13 H 0.10 -0.19 5.95 -51.93 -0.31 -0.50 16 14 O -0.29 -0.48 10.07 -19.43 -0.20 -0.68 16 15 C 0.13 0.25 6.68 -39.22 -0.26 -0.02 16 16 C -0.21 -0.18 9.02 -39.43 -0.36 -0.54 16 17 C -0.08 -0.04 10.04 -39.61 -0.40 -0.44 16 18 C -0.16 -0.08 10.04 -39.56 -0.40 -0.48 16 19 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 20 C -0.15 -0.24 9.99 -39.43 -0.39 -0.63 16 21 C -0.17 0.17 7.71 -25.92 -0.20 -0.03 16 22 N -0.57 -1.58 10.46 -13.93 -0.15 -1.73 16 23 C 0.22 0.25 10.92 -17.23 -0.19 0.06 16 24 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 25 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 26 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 27 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 28 H 0.17 -0.31 5.04 -52.48 -0.26 -0.58 16 29 H 0.41 -0.46 8.84 -40.82 -0.36 -0.82 16 30 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.10 -0.38 8.12 -51.93 -0.42 -0.80 16 32 H 0.13 -0.11 5.91 -52.49 -0.31 -0.42 16 33 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 34 H 0.12 -0.15 8.06 -52.48 -0.42 -0.58 16 35 H 0.13 -0.18 8.06 -52.49 -0.42 -0.61 16 36 H 0.13 0.07 8.06 -52.48 -0.42 -0.35 16 37 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.17 -0.11 8.06 -52.48 -0.42 -0.53 16 LS Contribution 331.27 15.07 4.99 4.99 Total: 0.00 -7.02 331.27 -12.47 -19.50 By element: Atomic # 1 Polarization: -4.33 SS G_CDS: -4.65 Total: -8.98 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -6.52 Total: -4.67 kcal Atomic # 7 Polarization: -3.24 SS G_CDS: -0.58 Total: -3.81 kcal Atomic # 8 Polarization: -0.10 SS G_CDS: -0.65 Total: -0.75 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.08 Total: -6.28 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -7.02 -12.47 -19.50 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11987232_12175864.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.141 kcal (2) G-P(sol) polarization free energy of solvation -7.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.473 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.496 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds