Wall clock time and date at job start Mon Mar 8 2021 03:27:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86304 * 109.47014 * 2 1 4 4 C 1.50701 * 109.46874 * 240.00083 * 2 1 3 5 5 C 1.38024 * 120.33022 * 119.72412 * 4 2 1 6 6 N 1.31979 * 120.84960 * 179.73083 * 5 4 2 7 7 C 1.32394 * 121.62517 * 0.57632 * 6 5 4 8 8 N 1.38995 * 119.70630 * 179.71005 * 7 6 5 9 9 C 1.46504 * 119.99948 * 179.97438 * 8 7 6 10 10 H 1.08997 * 112.85018 * 336.19972 * 9 8 7 11 11 C 1.53789 * 113.61345 * 107.50180 * 9 8 7 12 12 C 1.53778 * 87.08031 * 89.11739 * 11 9 8 13 13 H 1.09001 * 113.61337 * 270.88577 * 12 11 9 14 14 O 1.42896 * 113.69024 * 139.99418 * 12 11 9 15 15 C 1.35902 * 117.00287 * 104.59323 * 14 12 11 16 16 C 1.38732 * 120.05689 * 173.77600 * 15 14 12 17 17 C 1.38149 * 119.94076 * 179.74228 * 16 15 14 18 18 C 1.38267 * 120.05524 * 0.50590 * 17 16 15 19 19 C 1.38267 * 120.11307 * 359.77205 * 18 17 16 20 20 C 1.38140 * 120.05378 * 359.97041 * 19 18 17 21 21 C 1.53779 * 113.61726 * 204.99734 * 9 8 7 22 22 C 1.39146 * 120.58601 * 359.68673 * 7 6 5 23 23 C 1.38298 * 119.09779 * 0.02562 * 22 7 6 24 24 H 0.96698 * 113.99757 * 299.99544 * 1 2 3 25 25 H 1.08999 * 109.47352 * 120.00200 * 2 1 3 26 26 H 1.48495 * 110.00086 * 300.00191 * 3 2 1 27 27 H 1.48498 * 109.99761 * 61.32051 * 3 2 1 28 28 H 1.07997 * 119.57618 * 0.02562 * 5 4 2 29 29 H 0.96998 * 120.00411 * 359.97438 * 8 7 6 30 30 H 1.08992 * 113.61365 * 203.66484 * 11 9 8 31 31 H 1.09001 * 113.61115 * 334.56991 * 11 9 8 32 32 H 1.07996 * 120.02849 * 359.97438 * 16 15 14 33 33 H 1.07994 * 119.96985 * 180.23340 * 17 16 15 34 34 H 1.07999 * 119.94159 * 179.74834 * 18 17 16 35 35 H 1.08000 * 119.97072 * 179.97438 * 19 18 17 36 36 H 1.07998 * 120.02558 * 180.02562 * 20 19 18 37 37 H 1.09007 * 113.61394 * 25.43333 * 21 9 8 38 38 H 1.08997 * 113.61814 * 156.25156 * 21 9 8 39 39 H 1.08000 * 120.44904 * 180.02562 * 22 7 6 40 40 H 1.07993 * 120.74323 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7205 -0.0446 -2.1464 6 7 3.1703 -0.6582 -3.2248 7 6 2.8763 -1.9243 -3.4766 8 7 3.3667 -2.5295 -4.6278 9 6 3.0458 -3.9303 -4.9125 10 1 2.7936 -4.4973 -4.0164 11 6 2.0395 -4.1106 -6.0614 12 6 3.2487 -4.1390 -7.0111 13 1 3.5429 -3.1539 -7.3730 14 8 3.1329 -5.1034 -8.0592 15 6 2.8397 -4.6337 -9.3003 16 6 2.8396 -5.4956 -10.3874 17 6 2.5361 -5.0166 -11.6471 18 6 2.2427 -3.6774 -11.8266 19 6 2.2478 -2.8152 -10.7457 20 6 2.5455 -3.2903 -9.4832 21 6 4.0789 -4.6283 -5.8127 22 6 2.0812 -2.6546 -2.5988 23 6 1.6000 -2.0399 -1.4572 24 1 -0.3933 0.4416 0.7651 25 1 1.7924 -0.5138 0.8899 26 1 1.5615 2.4679 -1.2084 27 1 1.5879 2.4585 1.2242 28 1 2.9772 0.9905 -1.9760 29 1 3.9214 -2.0244 -5.2427 30 1 1.4943 -5.0535 -6.0203 31 1 1.3878 -3.2496 -6.2100 32 1 3.0730 -6.5409 -10.2483 33 1 2.5322 -5.6879 -12.4930 34 1 2.0097 -3.3041 -12.8129 35 1 2.0188 -1.7695 -10.8886 36 1 2.5490 -2.6165 -8.6392 37 1 5.0736 -4.1853 -5.7606 38 1 4.0922 -5.7126 -5.7026 39 1 1.8431 -3.6874 -2.8062 40 1 0.9803 -2.5815 -0.7580 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11987232_13915762.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:27:23 Heat of formation + Delta-G solvation = 42.796271 kcal Electronic energy + Delta-G solvation = -22855.498244 eV Core-core repulsion = 19410.594885 eV Total energy + Delta-G solvation = -3444.903358 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.131 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.80844 -41.15548 -39.81624 -38.09073 -37.57335 -35.02596 -33.36722 -31.93907 -31.27790 -30.59614 -27.02356 -26.86036 -25.74405 -24.72001 -23.55423 -23.03170 -22.41992 -20.52469 -19.67487 -18.75897 -18.50567 -17.90116 -17.30518 -16.82233 -16.66482 -16.53255 -16.11512 -15.63045 -15.62151 -15.37717 -15.18810 -14.87746 -14.38594 -14.28207 -14.04164 -13.90936 -13.76644 -13.71779 -13.54054 -13.18941 -12.75821 -12.47798 -12.34810 -12.03217 -11.92981 -11.60673 -11.42795 -11.15259 -10.73828 -10.57700 -10.30870 -9.93894 -9.13424 -8.74405 -4.97616 0.24773 0.40345 0.43849 0.51416 1.28158 1.58256 1.91971 1.95699 2.19343 2.78520 2.85406 3.18769 3.27054 3.37304 3.55883 3.59340 3.63860 3.82907 3.89976 3.95521 3.96390 4.09199 4.12364 4.25653 4.31453 4.42029 4.46220 4.51464 4.51975 4.54589 4.67107 4.73893 4.76093 4.78597 4.88120 5.03570 5.07239 5.31274 5.37708 5.48649 5.51016 5.62499 5.83670 5.95853 6.42309 6.46184 6.48625 7.14148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.061 4.061 3 Si 0.675 3.325 4 C -0.186 4.186 5 C 0.158 3.842 6 N -0.537 5.537 7 C 0.408 3.592 8 N -0.708 5.708 9 C 0.133 3.867 10 H 0.110 0.890 11 C -0.172 4.172 12 C 0.056 3.944 13 H 0.100 0.900 14 O -0.300 6.300 15 C 0.128 3.872 16 C -0.153 4.153 17 C -0.080 4.080 18 C -0.159 4.159 19 C -0.080 4.080 20 C -0.209 4.209 21 C -0.135 4.135 22 C -0.237 4.237 23 C -0.005 4.005 24 H 0.379 0.621 25 H 0.075 0.925 26 H -0.253 1.253 27 H -0.260 1.260 28 H 0.156 0.844 29 H 0.406 0.594 30 H 0.105 0.895 31 H 0.080 0.920 32 H 0.130 0.870 33 H 0.130 0.870 34 H 0.124 0.876 35 H 0.125 0.875 36 H 0.127 0.873 37 H 0.086 0.914 38 H 0.111 0.889 39 H 0.136 0.864 40 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.661 -1.078 1.733 2.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.171 4.171 3 Si 0.576 3.424 4 C -0.191 4.191 5 C 0.001 3.999 6 N -0.254 5.254 7 C 0.173 3.827 8 N -0.340 5.340 9 C 0.026 3.974 10 H 0.128 0.872 11 C -0.211 4.211 12 C -0.001 4.001 13 H 0.117 0.883 14 O -0.214 6.214 15 C 0.083 3.917 16 C -0.172 4.172 17 C -0.098 4.098 18 C -0.177 4.177 19 C -0.098 4.098 20 C -0.228 4.228 21 C -0.174 4.174 22 C -0.261 4.261 23 C -0.030 4.030 24 H 0.227 0.773 25 H 0.093 0.907 26 H -0.178 1.178 27 H -0.185 1.185 28 H 0.173 0.827 29 H 0.242 0.758 30 H 0.123 0.877 31 H 0.098 0.902 32 H 0.148 0.852 33 H 0.148 0.852 34 H 0.142 0.858 35 H 0.143 0.857 36 H 0.144 0.856 37 H 0.105 0.895 38 H 0.129 0.871 39 H 0.153 0.847 40 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 2.050 -0.486 0.647 2.204 hybrid contribution -1.530 -0.129 0.826 1.744 sum 0.520 -0.615 1.473 1.679 Atomic orbital electron populations 1.86590 1.18069 1.80094 1.49781 1.24528 0.84185 1.10563 0.97825 0.95237 0.91706 0.74836 0.80589 1.19943 1.04672 0.95656 0.98806 1.22149 0.91783 0.98493 0.87474 1.67142 1.27336 1.09006 1.21898 1.18319 0.89316 0.88513 0.86511 1.44135 1.56153 1.10942 1.22747 1.21604 0.96117 0.81882 0.97806 0.87179 1.24137 0.97505 1.04165 0.95331 1.24182 0.97774 0.92914 0.85215 0.88266 1.86155 1.84746 1.35601 1.14902 1.19035 0.95374 0.92455 0.84832 1.20500 1.05935 1.00026 0.90748 1.21031 0.96786 0.95711 0.96321 1.21127 1.03563 0.93803 0.99184 1.20997 0.96970 0.99850 0.92007 1.21267 1.07860 0.94773 0.98899 1.23601 0.98659 1.02900 0.92207 1.21489 1.05402 1.01851 0.97379 1.21178 0.93497 0.93326 0.95029 0.77289 0.90693 1.17762 1.18458 0.82708 0.75762 0.87700 0.90174 0.85162 0.85232 0.85775 0.85742 0.85554 0.89534 0.87058 0.84677 0.84673 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.56 12.75 -35.23 -0.45 -1.01 16 2 C -0.06 0.01 2.83 36.01 0.10 0.11 16 3 Si 0.68 -0.61 29.82 -169.99 -5.07 -5.68 16 4 C -0.19 -0.27 5.43 -104.46 -0.57 -0.84 16 5 C 0.16 0.30 9.84 -17.57 -0.17 0.12 16 6 N -0.54 -1.60 10.39 -12.44 -0.13 -1.73 16 7 C 0.41 0.69 7.65 -155.03 -1.19 -0.50 16 8 N -0.71 0.38 5.44 -53.14 -0.29 0.09 16 9 C 0.13 -0.28 4.11 -67.11 -0.28 -0.55 16 10 H 0.11 -0.32 6.10 -51.93 -0.32 -0.64 16 11 C -0.17 0.23 7.71 -25.92 -0.20 0.03 16 12 C 0.06 -0.04 3.51 -25.92 -0.09 -0.13 16 13 H 0.10 -0.13 6.04 -51.93 -0.31 -0.44 16 14 O -0.30 -0.54 10.15 -19.43 -0.20 -0.74 16 15 C 0.13 0.30 6.68 -39.22 -0.26 0.04 16 16 C -0.15 -0.29 9.99 -39.43 -0.39 -0.68 16 17 C -0.08 -0.08 10.04 -39.60 -0.40 -0.48 16 18 C -0.16 -0.16 10.04 -39.56 -0.40 -0.55 16 19 C -0.08 -0.09 10.04 -39.61 -0.40 -0.49 16 20 C -0.21 -0.32 9.01 -39.43 -0.36 -0.68 16 21 C -0.14 0.31 7.66 -25.92 -0.20 0.11 16 22 C -0.24 -0.19 9.29 -39.22 -0.36 -0.56 16 23 C 0.00 -0.01 9.77 -39.32 -0.38 -0.39 16 24 H 0.38 -1.10 8.74 45.56 0.40 -0.70 16 25 H 0.08 -0.14 7.96 -51.93 -0.41 -0.56 16 26 H -0.25 -0.60 7.11 56.52 0.40 -0.19 16 27 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 28 H 0.16 -0.02 4.88 -52.49 -0.26 -0.28 16 29 H 0.41 -0.41 8.82 -40.82 -0.36 -0.77 16 30 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 32 H 0.13 0.10 8.06 -52.49 -0.42 -0.33 16 33 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 34 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 36 H 0.13 0.01 5.95 -52.49 -0.31 -0.30 16 37 H 0.09 -0.22 8.14 -51.92 -0.42 -0.64 16 38 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 39 H 0.14 -0.17 6.03 -52.49 -0.32 -0.48 16 40 H 0.14 -0.03 8.06 -52.49 -0.42 -0.45 16 LS Contribution 333.75 15.07 5.03 5.03 Total: 0.00 -6.91 333.75 -11.54 -18.45 By element: Atomic # 1 Polarization: -4.09 SS G_CDS: -4.89 Total: -8.98 kcal Atomic # 6 Polarization: 0.10 SS G_CDS: -5.54 Total: -5.44 kcal Atomic # 7 Polarization: -1.22 SS G_CDS: -0.42 Total: -1.64 kcal Atomic # 8 Polarization: -1.10 SS G_CDS: -0.65 Total: -1.75 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.07 Total: -5.68 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -6.91 -11.54 -18.45 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11987232_13915762.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.249 kcal (2) G-P(sol) polarization free energy of solvation -6.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.336 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.540 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.453 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.796 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds