Wall clock time and date at job start Mon Mar 8 2021 03:27:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47109 * 2 1 4 4 C 1.50698 * 109.47354 * 239.99639 * 2 1 3 5 5 C 1.33323 * 125.95620 * 300.00463 * 4 2 1 6 6 N 1.32116 * 114.57955 * 179.97438 * 5 4 2 7 7 C 1.29686 * 116.87077 * 359.97438 * 6 5 4 8 8 N 1.38613 * 124.94983 * 179.97438 * 7 6 5 9 9 C 1.46497 * 120.00242 * 0.03275 * 8 7 6 10 10 H 1.09002 * 112.84851 * 23.79528 * 9 8 7 11 11 C 1.53781 * 113.61448 * 154.99603 * 9 8 7 12 12 C 1.53779 * 87.07948 * 89.11603 * 11 9 8 13 13 H 1.09006 * 113.61286 * 270.80004 * 12 11 9 14 14 O 1.42901 * 113.61603 * 139.98542 * 12 11 9 15 15 C 1.35901 * 117.00403 * 158.38308 * 14 12 11 16 16 C 1.38729 * 120.05535 * 186.26928 * 15 14 12 17 17 C 1.38145 * 119.94053 * 180.25168 * 16 15 14 18 18 C 1.38263 * 120.05681 * 359.44657 * 17 16 15 19 19 C 1.38265 * 120.11390 * 0.29818 * 18 17 16 20 20 C 1.38144 * 120.05096 * 359.97438 * 19 18 17 21 21 C 1.53773 * 87.17654 * 25.38681 * 12 11 9 22 22 S 1.70965 * 110.09866 * 0.24568 * 7 6 5 23 23 H 0.96698 * 113.99853 * 60.00216 * 1 2 3 24 24 H 1.09000 * 109.47037 * 120.00070 * 2 1 3 25 25 H 1.48507 * 109.99774 * 59.99767 * 3 2 1 26 26 H 1.48500 * 110.00307 * 181.31250 * 3 2 1 27 27 H 1.08003 * 122.70826 * 359.97372 * 5 4 2 28 28 H 0.97007 * 119.99278 * 180.02562 * 8 7 6 29 29 H 1.08997 * 113.61184 * 334.56579 * 11 9 8 30 30 H 1.08996 * 113.61230 * 203.65919 * 11 9 8 31 31 H 1.08001 * 120.03069 * 359.97438 * 16 15 14 32 32 H 1.08000 * 119.97024 * 179.72876 * 17 16 15 33 33 H 1.08002 * 119.94330 * 180.27869 * 18 17 16 34 34 H 1.07997 * 119.97745 * 179.97438 * 19 18 17 35 35 H 1.08004 * 120.02859 * 179.97438 * 20 19 18 36 36 H 1.09008 * 113.60931 * 89.15974 * 21 12 11 37 37 H 1.08998 * 113.61736 * 220.06214 * 21 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6836 -1.9788 -1.5580 6 7 2.2378 -2.3721 -2.6910 7 6 2.9417 -1.4938 -3.3351 8 7 3.5949 -1.7252 -4.5355 9 6 3.5173 -3.0436 -5.1695 10 1 2.6356 -3.6080 -4.8657 11 6 3.7323 -3.0088 -6.6918 12 6 5.2337 -3.1763 -6.4044 13 1 5.7610 -2.2315 -6.2718 14 8 5.8956 -4.0583 -7.3133 15 6 7.2428 -3.9248 -7.4320 16 6 7.9319 -4.6562 -8.3883 17 6 9.3021 -4.5226 -8.5034 18 6 9.9850 -3.6522 -7.6741 19 6 9.2998 -2.9181 -6.7237 20 6 7.9304 -3.0524 -6.6008 21 6 4.8280 -3.8463 -5.0810 22 16 2.9527 -0.0111 -2.4840 23 1 -0.3933 0.4417 -0.7651 24 1 1.7923 -0.5138 0.8900 25 1 1.5614 2.4679 1.2085 26 1 3.5346 1.7703 -0.0320 27 1 1.0786 -2.6320 -0.9466 28 1 4.1034 -1.0140 -4.9558 29 1 3.4790 -2.0512 -7.1466 30 1 3.2905 -3.8570 -7.2146 31 1 7.3983 -5.3329 -9.0393 32 1 9.8396 -5.0950 -9.2448 33 1 11.0556 -3.5458 -7.7687 34 1 9.8355 -2.2392 -6.0768 35 1 7.3956 -2.4791 -5.8580 36 1 4.6864 -4.9240 -5.1628 37 1 5.4580 -3.5639 -4.2376 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11987232_15704118.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:27:26 Heat of formation + Delta-G solvation = 47.427823 kcal Electronic energy + Delta-G solvation = -21436.236758 eV Core-core repulsion = 18080.686485 eV Total energy + Delta-G solvation = -3355.550273 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.087 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.68654 -40.73224 -39.76116 -38.04067 -37.55706 -34.83301 -31.96113 -31.23409 -30.65999 -27.09954 -26.87054 -26.15944 -24.56156 -23.53949 -23.04909 -21.53669 -20.38775 -19.70702 -19.33974 -18.13460 -17.45334 -16.98426 -16.76543 -16.69636 -16.38885 -16.17677 -15.82366 -15.61631 -15.43814 -15.06838 -14.90653 -14.41144 -14.14196 -13.99358 -13.79502 -13.58426 -13.25058 -12.87884 -12.75213 -12.50390 -12.37197 -12.06941 -12.03734 -11.64364 -11.44755 -11.22764 -10.82558 -10.29243 -10.19305 -9.96662 -9.15858 -8.83462 -5.16041 -0.08836 -0.04074 0.37557 0.48923 0.63919 1.23041 1.55552 1.88177 1.97111 1.99112 2.17836 2.82705 3.18237 3.26979 3.40390 3.51930 3.60045 3.68595 3.87951 3.90643 3.94458 4.16606 4.25197 4.43564 4.45228 4.48969 4.54305 4.56182 4.64708 4.70970 4.72466 4.78057 4.84544 5.04408 5.14127 5.35006 5.45800 5.59871 5.73658 5.82276 5.92907 6.45628 6.50150 6.94495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.011 4.011 3 Si 0.655 3.345 4 C -0.305 4.305 5 C 0.119 3.881 6 N -0.547 5.547 7 C 0.326 3.674 8 N -0.679 5.679 9 C 0.140 3.860 10 H 0.118 0.882 11 C -0.136 4.136 12 C 0.054 3.946 13 H 0.098 0.902 14 O -0.300 6.300 15 C 0.128 3.872 16 C -0.153 4.153 17 C -0.080 4.080 18 C -0.159 4.159 19 C -0.080 4.080 20 C -0.210 4.210 21 C -0.167 4.167 22 S 0.091 5.909 23 H 0.380 0.620 24 H 0.122 0.878 25 H -0.235 1.235 26 H -0.241 1.241 27 H 0.177 0.823 28 H 0.414 0.586 29 H 0.085 0.915 30 H 0.112 0.888 31 H 0.131 0.869 32 H 0.130 0.870 33 H 0.124 0.876 34 H 0.124 0.876 35 H 0.126 0.874 36 H 0.105 0.895 37 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.676 2.814 -2.564 3.866 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.125 4.125 3 Si 0.556 3.444 4 C -0.427 4.427 5 C -0.032 4.032 6 N -0.272 5.272 7 C -0.044 4.044 8 N -0.318 5.318 9 C 0.032 3.968 10 H 0.136 0.864 11 C -0.174 4.174 12 C -0.002 4.002 13 H 0.115 0.885 14 O -0.213 6.213 15 C 0.083 3.917 16 C -0.172 4.172 17 C -0.098 4.098 18 C -0.177 4.177 19 C -0.099 4.099 20 C -0.229 4.229 21 C -0.207 4.207 22 S 0.341 5.659 23 H 0.228 0.772 24 H 0.139 0.861 25 H -0.158 1.158 26 H -0.165 1.165 27 H 0.194 0.806 28 H 0.251 0.749 29 H 0.104 0.896 30 H 0.130 0.870 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.142 0.858 34 H 0.142 0.858 35 H 0.144 0.856 36 H 0.123 0.877 37 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.489 3.264 -2.122 4.168 hybrid contribution -0.018 -0.755 0.573 0.948 sum 1.471 2.509 -1.548 3.295 Atomic orbital electron populations 1.86516 1.16844 1.81680 1.49139 1.24121 0.84869 1.08894 0.94606 0.94991 0.81965 0.78041 0.89452 1.25616 1.13006 0.99301 1.04819 1.21337 0.97093 0.93021 0.91736 1.66471 1.16818 1.33533 1.10330 1.23675 0.95033 0.93612 0.92108 1.43697 1.54697 1.13752 1.19615 1.21671 0.99464 0.83482 0.92148 0.86379 1.23621 0.93379 1.04573 0.95856 1.24237 0.92770 0.93501 0.89737 0.88470 1.86167 1.17226 1.56712 1.61230 1.19038 0.82779 0.95199 0.94642 1.20509 0.94232 1.02792 0.99660 1.21036 0.93210 0.97226 0.98329 1.21125 1.00325 0.98697 0.97542 1.20990 0.93462 0.98078 0.97321 1.21247 0.95713 1.03134 1.02771 1.24107 0.97633 1.01816 0.97112 1.84002 1.51319 1.13723 1.16898 0.77236 0.86097 1.15846 1.16518 0.80595 0.74860 0.89639 0.86955 0.85133 0.85214 0.85770 0.85764 0.85640 0.87673 0.90383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.03 12.87 -35.23 -0.45 -0.42 16 2 C -0.01 0.00 2.99 36.00 0.11 0.11 16 3 Si 0.66 -0.62 31.05 -169.99 -5.28 -5.90 16 4 C -0.30 -0.11 5.74 -36.03 -0.21 -0.31 16 5 C 0.12 0.18 11.22 -19.15 -0.21 -0.03 16 6 N -0.55 -1.33 9.83 -15.21 -0.15 -1.48 16 7 C 0.33 0.21 8.09 -87.68 -0.71 -0.50 16 8 N -0.68 1.05 5.42 -54.90 -0.30 0.75 16 9 C 0.14 -0.20 4.45 -67.03 -0.30 -0.50 16 10 H 0.12 -0.01 7.66 -51.93 -0.40 -0.41 16 11 C -0.14 0.31 7.66 -25.92 -0.20 0.11 16 12 C 0.05 -0.06 3.48 -25.92 -0.09 -0.15 16 13 H 0.10 -0.22 6.08 -51.93 -0.32 -0.53 16 14 O -0.30 -0.49 10.15 -19.43 -0.20 -0.68 16 15 C 0.13 0.26 6.68 -39.22 -0.26 0.00 16 16 C -0.15 -0.25 9.99 -39.43 -0.39 -0.65 16 17 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 18 C -0.16 -0.10 10.04 -39.56 -0.40 -0.50 16 19 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 20 C -0.21 -0.21 9.01 -39.43 -0.36 -0.57 16 21 C -0.17 0.15 7.72 -25.83 -0.20 -0.05 16 22 S 0.09 -0.05 20.57 -107.50 -2.21 -2.26 16 23 H 0.38 -1.39 8.70 45.56 0.40 -1.00 16 24 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 25 H -0.24 -0.41 7.11 56.52 0.40 -0.01 16 26 H -0.24 -0.30 7.11 56.52 0.40 0.10 16 27 H 0.18 0.09 8.06 -52.48 -0.42 -0.33 16 28 H 0.41 -1.53 8.83 -40.82 -0.36 -1.89 16 29 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 30 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 32 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 33 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 34 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 35 H 0.13 -0.09 5.97 -52.48 -0.31 -0.40 16 36 H 0.10 -0.05 8.14 -51.92 -0.42 -0.47 16 37 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 329.30 15.07 4.96 4.96 Total: 0.00 -6.20 329.30 -12.05 -18.24 By element: Atomic # 1 Polarization: -4.86 SS G_CDS: -4.41 Total: -9.27 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: -4.01 Total: -3.94 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.45 Total: -0.73 kcal Atomic # 8 Polarization: -0.46 SS G_CDS: -0.65 Total: -1.11 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.28 Total: -5.90 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -2.21 Total: -2.26 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -6.20 -12.05 -18.24 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11987232_15704118.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.673 kcal (2) G-P(sol) polarization free energy of solvation -6.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.473 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.245 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds