Wall clock time and date at job start Mon Mar 8 2021 03:27:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47293 * 2 1 4 4 C 1.50695 * 109.47230 * 239.99517 * 2 1 3 5 5 C 1.37983 * 120.32786 * 120.00397 * 4 2 1 6 6 N 1.32005 * 120.90227 * 180.27459 * 5 4 2 7 7 C 1.32335 * 121.64700 * 359.47731 * 6 5 4 8 8 N 1.39146 * 119.71816 * 180.28607 * 7 6 5 9 9 C 1.46500 * 119.99963 * 0.22941 * 8 7 6 10 10 H 1.08997 * 112.85345 * 334.66760 * 9 8 7 11 11 C 1.53779 * 113.61005 * 105.86572 * 9 8 7 12 12 C 1.54045 * 86.99005 * 89.16000 * 11 9 8 13 13 H 1.09001 * 113.61341 * 270.88464 * 12 11 9 14 14 O 1.42898 * 113.62232 * 139.97649 * 12 11 9 15 15 C 1.35892 * 117.00302 * 104.62025 * 14 12 11 16 16 C 1.38735 * 120.05896 * 173.78053 * 15 14 12 17 17 C 1.38149 * 119.94221 * 179.74461 * 16 15 14 18 18 C 1.38261 * 120.05586 * 0.51076 * 17 16 15 19 19 C 1.38264 * 120.11370 * 359.76559 * 18 17 16 20 20 C 1.38146 * 120.05367 * 359.97438 * 19 18 17 21 21 C 1.53779 * 113.61404 * 203.46815 * 9 8 7 22 22 C 1.39345 * 120.56412 * 0.52010 * 7 6 5 23 23 F 1.35092 * 120.47236 * 179.72240 * 22 7 6 24 24 C 1.38445 * 119.05220 * 359.74493 * 22 7 6 25 25 H 0.96695 * 113.99948 * 60.00427 * 1 2 3 26 26 H 1.09013 * 109.46670 * 119.99634 * 2 1 3 27 27 H 1.48499 * 110.00122 * 59.99722 * 3 2 1 28 28 H 1.48499 * 110.00118 * 181.31532 * 3 2 1 29 29 H 1.08003 * 119.54517 * 359.97438 * 5 4 2 30 30 H 0.96997 * 119.99591 * 180.23512 * 8 7 6 31 31 H 1.09006 * 113.61382 * 203.66383 * 11 9 8 32 32 H 1.09002 * 113.61705 * 334.55896 * 11 9 8 33 33 H 1.08001 * 120.02742 * 359.97438 * 16 15 14 34 34 H 1.08005 * 119.96793 * 180.27515 * 17 16 15 35 35 H 1.08001 * 119.94245 * 179.74987 * 18 17 16 36 36 H 1.08002 * 119.97172 * 180.02562 * 19 18 17 37 37 H 1.08004 * 120.02532 * 179.97438 * 20 19 18 38 38 H 1.09001 * 113.61372 * 25.43344 * 21 9 8 39 39 H 1.08999 * 113.61693 * 156.34009 * 21 9 8 40 40 H 1.08004 * 120.75474 * 180.02562 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7251 -0.0465 -2.1431 6 7 3.1669 -0.6563 -3.2273 7 6 2.8781 -1.9232 -3.4779 8 7 3.3702 -2.5279 -4.6304 9 6 4.2083 -1.7639 -5.5578 10 1 4.0287 -0.6901 -5.5042 11 6 5.6973 -2.1432 -5.4976 12 6 5.3866 -3.2051 -6.5694 13 1 5.0852 -4.1676 -6.1559 14 8 6.4001 -3.3224 -7.5699 15 6 7.2198 -4.4037 -7.4940 16 6 8.1403 -4.6500 -8.5024 17 6 8.9760 -5.7470 -8.4202 18 6 8.8884 -6.6049 -7.3394 19 6 7.9680 -6.3647 -6.3360 20 6 7.1337 -5.2662 -6.4108 21 6 4.2034 -2.3184 -6.9921 22 6 2.0815 -2.6554 -2.5999 23 9 1.7832 -3.9470 -2.8603 24 6 1.5996 -2.0401 -1.4570 25 1 -0.3933 0.4416 -0.7650 26 1 1.7923 -0.5139 0.8901 27 1 1.5615 2.4679 1.2084 28 1 3.5346 1.7702 -0.0320 29 1 2.9844 0.9876 -1.9704 30 1 3.1582 -3.4553 -4.8198 31 1 6.3635 -1.3536 -5.8455 32 1 6.0024 -2.5640 -4.5394 33 1 8.2059 -3.9828 -9.3490 34 1 9.6958 -5.9367 -9.2028 35 1 9.5399 -7.4641 -7.2790 36 1 7.9018 -7.0361 -5.4926 37 1 6.4146 -5.0793 -5.6269 38 1 3.3031 -2.8807 -7.2398 39 1 4.4618 -1.5767 -7.7479 40 1 0.9801 -2.5819 -0.7575 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_11987232_17656566.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:27:33 Heat of formation + Delta-G solvation = -4.389587 kcal Electronic energy + Delta-G solvation = -25372.081813 eV Core-core repulsion = 21455.678347 eV Total energy + Delta-G solvation = -3916.403466 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.121 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -49.93400 -41.78014 -41.25102 -39.82806 -38.16043 -37.54487 -35.11492 -33.22333 -31.94986 -31.28074 -30.59063 -27.03643 -26.85129 -26.09773 -24.80445 -23.50971 -23.05988 -22.84564 -20.64013 -19.82257 -19.19471 -18.52134 -18.27671 -17.57221 -17.30339 -17.01672 -16.79249 -16.59537 -16.16993 -16.07525 -15.96859 -15.50161 -15.42017 -15.27407 -14.73933 -14.40401 -14.38628 -14.15843 -14.00967 -13.76249 -13.60207 -13.46426 -13.12122 -12.72346 -12.65886 -12.47786 -12.10897 -12.03347 -11.62810 -11.41039 -11.31719 -10.77027 -10.69840 -10.50536 -9.94596 -9.13637 -8.86637 -5.12272 -0.13359 0.05605 0.39624 0.50994 1.18761 1.54386 1.79312 1.90207 2.20571 2.48479 2.84783 2.97030 3.12311 3.29209 3.32102 3.36032 3.53065 3.64003 3.65353 3.78488 3.90101 3.92163 3.96856 4.19098 4.28299 4.36375 4.38686 4.45710 4.51942 4.58281 4.61580 4.63306 4.68533 4.78671 4.82880 4.90666 4.92362 5.06556 5.33250 5.37694 5.47953 5.61766 5.81565 5.87197 6.05924 6.48025 6.48395 6.86658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.686 3.314 4 C -0.207 4.207 5 C 0.147 3.853 6 N -0.509 5.509 7 C 0.392 3.608 8 N -0.703 5.703 9 C 0.138 3.862 10 H 0.120 0.880 11 C -0.167 4.167 12 C 0.053 3.947 13 H 0.098 0.902 14 O -0.300 6.300 15 C 0.129 3.871 16 C -0.154 4.154 17 C -0.080 4.080 18 C -0.159 4.159 19 C -0.080 4.080 20 C -0.210 4.210 21 C -0.137 4.137 22 C -0.018 4.018 23 F -0.133 7.133 24 C -0.037 4.037 25 H 0.380 0.620 26 H 0.116 0.884 27 H -0.251 1.251 28 H -0.254 1.254 29 H 0.164 0.836 30 H 0.412 0.588 31 H 0.104 0.896 32 H 0.076 0.924 33 H 0.131 0.869 34 H 0.130 0.870 35 H 0.124 0.876 36 H 0.124 0.876 37 H 0.126 0.874 38 H 0.084 0.916 39 H 0.111 0.889 40 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.691 1.456 -1.320 2.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.167 4.167 3 Si 0.588 3.412 4 C -0.212 4.212 5 C -0.010 4.010 6 N -0.225 5.225 7 C 0.154 3.846 8 N -0.336 5.336 9 C 0.032 3.968 10 H 0.138 0.862 11 C -0.206 4.206 12 C -0.003 4.003 13 H 0.115 0.885 14 O -0.213 6.213 15 C 0.084 3.916 16 C -0.172 4.172 17 C -0.098 4.098 18 C -0.177 4.177 19 C -0.098 4.098 20 C -0.229 4.229 21 C -0.175 4.175 22 C -0.045 4.045 23 F -0.112 7.112 24 C -0.064 4.064 25 H 0.227 0.773 26 H 0.133 0.867 27 H -0.176 1.176 28 H -0.178 1.178 29 H 0.181 0.819 30 H 0.249 0.751 31 H 0.123 0.877 32 H 0.095 0.905 33 H 0.149 0.851 34 H 0.148 0.852 35 H 0.142 0.858 36 H 0.142 0.858 37 H 0.144 0.856 38 H 0.102 0.898 39 H 0.130 0.870 40 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 0.485 2.424 -1.204 2.750 hybrid contribution -0.552 -1.976 0.860 2.225 sum -0.067 0.448 -0.344 0.569 Atomic orbital electron populations 1.86513 1.17024 1.81665 1.49330 1.24868 0.85271 1.09945 0.96616 0.94826 0.81070 0.77537 0.87784 1.20962 1.04502 0.95233 1.00543 1.22362 0.91734 0.99118 0.87762 1.67279 1.26180 1.07326 1.21743 1.18362 0.90116 0.89108 0.87023 1.44237 1.54329 1.14350 1.20643 1.21564 0.89588 0.97809 0.87881 0.86249 1.24110 0.97727 0.99588 0.99176 1.24295 0.88200 0.98622 0.89200 0.88485 1.86159 1.42654 1.41276 1.51249 1.19039 0.91475 0.86893 0.94234 1.20506 0.97656 1.00050 0.99002 1.21033 0.97552 0.93372 0.97861 1.21121 1.00514 1.00843 0.95232 1.20991 0.94337 0.96146 0.98366 1.21257 1.04020 0.98110 0.99480 1.23619 0.97058 0.99687 0.97169 1.17992 1.06749 0.80931 0.98799 1.91495 1.92161 1.33602 1.93958 1.21291 0.96185 0.94268 0.94621 0.77256 0.86676 1.17573 1.17838 0.81939 0.75060 0.87723 0.90515 0.85139 0.85222 0.85779 0.85777 0.85638 0.89781 0.87017 0.83194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.50 12.78 -35.23 -0.45 0.05 16 2 C -0.06 0.08 2.84 36.00 0.10 0.18 16 3 Si 0.69 -1.59 29.82 -169.99 -5.07 -6.65 16 4 C -0.21 0.16 5.40 -104.47 -0.56 -0.40 16 5 C 0.15 -0.09 9.84 -17.57 -0.17 -0.27 16 6 N -0.51 -0.48 9.15 -12.36 -0.11 -0.59 16 7 C 0.39 0.34 7.49 -154.86 -1.16 -0.82 16 8 N -0.70 0.49 5.42 -53.06 -0.29 0.21 16 9 C 0.14 -0.17 4.33 -67.12 -0.29 -0.46 16 10 H 0.12 -0.09 7.44 -51.93 -0.39 -0.48 16 11 C -0.17 0.12 7.73 -25.78 -0.20 -0.08 16 12 C 0.05 -0.03 3.52 -25.78 -0.09 -0.12 16 13 H 0.10 -0.12 6.04 -51.93 -0.31 -0.43 16 14 O -0.30 -0.60 10.15 -19.40 -0.20 -0.80 16 15 C 0.13 0.31 6.68 -39.22 -0.26 0.05 16 16 C -0.15 -0.30 9.99 -39.43 -0.39 -0.69 16 17 C -0.08 -0.08 10.04 -39.61 -0.40 -0.48 16 18 C -0.16 -0.15 10.04 -39.56 -0.40 -0.55 16 19 C -0.08 -0.09 10.04 -39.61 -0.40 -0.49 16 20 C -0.21 -0.33 9.01 -39.43 -0.36 -0.68 16 21 C -0.14 0.25 7.65 -25.92 -0.20 0.05 16 22 C -0.02 -0.02 7.35 -39.09 -0.29 -0.31 16 23 F -0.13 -0.22 16.65 2.25 0.04 -0.18 16 24 C -0.04 -0.01 9.75 -39.26 -0.38 -0.39 16 25 H 0.38 -1.79 8.70 45.56 0.40 -1.39 16 26 H 0.12 -0.13 7.96 -51.92 -0.41 -0.54 16 27 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 28 H -0.25 0.03 7.11 56.52 0.40 0.43 16 29 H 0.16 -0.47 4.88 -52.48 -0.26 -0.72 16 30 H 0.41 -0.70 8.17 -40.82 -0.33 -1.04 16 31 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.13 0.11 8.06 -52.49 -0.42 -0.32 16 34 H 0.13 -0.14 8.06 -52.48 -0.42 -0.57 16 35 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 36 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 37 H 0.13 0.01 5.95 -52.48 -0.31 -0.30 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 40 H 0.15 -0.09 8.06 -52.48 -0.42 -0.51 16 LS Contribution 341.87 15.07 5.15 5.15 Total: 0.00 -6.23 341.87 -11.00 -17.23 By element: Atomic # 1 Polarization: -4.33 SS G_CDS: -4.62 Total: -8.96 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: -5.45 Total: -5.45 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.40 Total: -0.38 kcal Atomic # 8 Polarization: -0.11 SS G_CDS: -0.65 Total: -0.75 kcal Atomic # 9 Polarization: -0.22 SS G_CDS: 0.04 Total: -0.18 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.07 Total: -6.65 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -6.23 -11.00 -17.23 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_11987232_17656566.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.840 kcal (2) G-P(sol) polarization free energy of solvation -6.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.229 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds