Wall clock time and date at job start Mon Mar 8 2021 04:54:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47204 * 2 1 4 4 C 1.50708 * 109.47223 * 240.00302 * 2 1 3 5 5 C 1.33326 * 125.94756 * 300.00016 * 4 2 1 6 6 N 1.32121 * 114.57612 * 179.97438 * 5 4 2 7 7 C 1.29688 * 116.86643 * 0.02562 * 6 5 4 8 8 N 1.38611 * 124.94853 * 179.97438 * 7 6 5 9 9 C 1.46507 * 120.00219 * 0.02562 * 8 7 6 10 10 H 1.08999 * 112.90136 * 23.75454 * 9 8 7 11 11 C 1.53775 * 113.61476 * 155.00014 * 9 8 7 12 12 C 1.53782 * 87.07984 * 139.98316 * 11 9 8 13 13 H 1.09002 * 113.61170 * 89.11699 * 12 11 9 14 14 O 1.42894 * 113.61512 * 220.01722 * 12 11 9 15 15 C 1.35903 * 117.00275 * 202.11648 * 14 12 11 16 16 C 1.38729 * 120.05424 * 173.78437 * 15 14 12 17 17 C 1.38153 * 119.93769 * 179.69809 * 16 15 14 18 18 C 1.38261 * 120.05501 * 0.59524 * 17 16 15 19 19 C 1.38265 * 120.11457 * 359.67998 * 18 17 16 20 20 C 1.38146 * 120.05383 * 0.02562 * 19 18 17 21 21 C 1.53771 * 113.61563 * 252.50262 * 9 8 7 22 22 S 1.70960 * 110.10125 * 0.24042 * 7 6 5 23 23 H 0.96706 * 113.99590 * 60.00015 * 1 2 3 24 24 H 1.08993 * 109.47085 * 120.00545 * 2 1 3 25 25 H 1.48498 * 110.00293 * 298.68488 * 3 2 1 26 26 H 1.48504 * 109.99972 * 60.00256 * 3 2 1 27 27 H 1.07999 * 122.71368 * 359.97438 * 5 4 2 28 28 H 0.97005 * 120.00121 * 180.02562 * 8 7 6 29 29 H 1.09003 * 113.61482 * 254.53313 * 11 9 8 30 30 H 1.08996 * 113.61334 * 25.43592 * 11 9 8 31 31 H 1.07998 * 120.03326 * 359.97438 * 16 15 14 32 32 H 1.08002 * 119.96804 * 180.31389 * 17 16 15 33 33 H 1.08007 * 119.94093 * 179.69666 * 18 17 16 34 34 H 1.08001 * 119.97517 * 180.02562 * 19 18 17 35 35 H 1.07998 * 120.02414 * 179.97438 * 20 19 18 36 36 H 1.09004 * 113.61470 * 334.56252 * 21 9 8 37 37 H 1.09001 * 113.61745 * 105.38265 * 21 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2306 5 6 1.6835 -1.9788 -1.5581 6 7 2.2376 -2.3721 -2.6912 7 6 2.9423 -1.4939 -3.3347 8 7 3.5956 -1.7253 -4.5351 9 6 3.5172 -3.0435 -5.1696 10 1 2.6359 -3.6085 -4.8663 11 6 3.7326 -3.0083 -6.6918 12 6 4.5516 -4.2993 -6.5267 13 1 3.9531 -5.2078 -6.5944 14 8 5.7229 -4.3427 -7.3442 15 6 6.2381 -5.5698 -7.6194 16 6 7.2945 -5.6960 -8.5097 17 6 7.8205 -6.9439 -8.7830 18 6 7.2869 -8.0676 -8.1795 19 6 6.2302 -7.9450 -7.2962 20 6 5.7047 -6.6988 -7.0149 21 6 4.8249 -3.8479 -5.0822 22 16 2.9541 -0.0116 -2.4831 23 1 -0.3933 0.4417 -0.7651 24 1 1.7923 -0.5139 0.8899 25 1 1.5879 2.4586 -1.2241 26 1 1.5615 2.4679 1.2086 27 1 1.0786 -2.6320 -0.9467 28 1 4.1047 -1.0144 -4.9552 29 1 2.8158 -3.1431 -7.2658 30 1 4.3232 -2.1567 -7.0296 31 1 7.7083 -4.8191 -8.9853 32 1 8.6462 -7.0422 -9.4722 33 1 7.6963 -9.0428 -8.3983 34 1 5.8154 -8.8243 -6.8258 35 1 4.8791 -6.6037 -6.3252 36 1 5.7142 -3.2259 -4.9800 37 1 4.7904 -4.6598 -4.3557 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12060302_15704118.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:54:20 Heat of formation + Delta-G solvation = 45.615530 kcal Electronic energy + Delta-G solvation = -21252.015018 eV Core-core repulsion = 17896.386158 eV Total energy + Delta-G solvation = -3355.628860 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.087 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.61152 -40.70664 -39.70667 -38.10265 -37.56458 -35.00001 -31.93864 -31.25581 -30.66231 -27.15545 -26.91067 -25.93075 -24.43595 -23.54211 -22.95028 -21.25579 -20.79366 -19.60240 -19.39367 -18.24692 -17.34234 -17.09954 -16.75997 -16.53832 -16.40368 -16.15607 -15.97100 -15.62694 -15.39648 -15.11399 -14.92333 -14.37141 -14.15049 -13.87294 -13.71573 -13.61396 -12.95849 -12.90740 -12.63694 -12.39279 -12.37505 -12.36164 -12.01033 -11.69868 -11.49425 -11.19643 -10.91810 -10.27302 -10.19915 -9.94310 -9.14431 -8.77336 -5.06798 -0.05298 0.01081 0.39908 0.50776 0.67840 1.23768 1.54705 1.89363 1.92914 2.00374 2.34778 2.84833 3.21283 3.27725 3.33008 3.58564 3.60687 3.66497 3.88587 3.91932 3.95871 4.12747 4.26810 4.45396 4.47746 4.50883 4.51641 4.53427 4.66127 4.71963 4.74659 4.78892 4.89416 5.06551 5.16967 5.37137 5.48239 5.62029 5.78595 5.83350 5.99418 6.34519 6.46633 6.97662 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.017 4.017 3 Si 0.654 3.346 4 C -0.305 4.305 5 C 0.119 3.881 6 N -0.551 5.551 7 C 0.325 3.675 8 N -0.680 5.680 9 C 0.144 3.856 10 H 0.124 0.876 11 C -0.139 4.139 12 C 0.059 3.941 13 H 0.106 0.894 14 O -0.300 6.300 15 C 0.128 3.872 16 C -0.154 4.154 17 C -0.081 4.081 18 C -0.158 4.158 19 C -0.080 4.080 20 C -0.209 4.209 21 C -0.169 4.169 22 S 0.091 5.909 23 H 0.377 0.623 24 H 0.125 0.875 25 H -0.244 1.244 26 H -0.237 1.237 27 H 0.176 0.824 28 H 0.416 0.584 29 H 0.088 0.912 30 H 0.100 0.900 31 H 0.130 0.870 32 H 0.130 0.870 33 H 0.124 0.876 34 H 0.125 0.875 35 H 0.129 0.871 36 H 0.097 0.903 37 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.049 0.333 -1.414 2.511 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.130 4.130 3 Si 0.553 3.447 4 C -0.427 4.427 5 C -0.032 4.032 6 N -0.276 5.276 7 C -0.045 4.045 8 N -0.318 5.318 9 C 0.036 3.964 10 H 0.141 0.859 11 C -0.177 4.177 12 C 0.002 3.998 13 H 0.123 0.877 14 O -0.213 6.213 15 C 0.083 3.917 16 C -0.172 4.172 17 C -0.099 4.099 18 C -0.177 4.177 19 C -0.098 4.098 20 C -0.228 4.228 21 C -0.208 4.208 22 S 0.341 5.659 23 H 0.225 0.775 24 H 0.143 0.857 25 H -0.168 1.168 26 H -0.161 1.161 27 H 0.193 0.807 28 H 0.254 0.746 29 H 0.107 0.893 30 H 0.119 0.881 31 H 0.148 0.852 32 H 0.148 0.852 33 H 0.142 0.858 34 H 0.143 0.857 35 H 0.146 0.854 36 H 0.116 0.884 37 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.361 1.363 -1.372 3.052 hybrid contribution -1.381 -0.702 -0.121 1.554 sum 0.980 0.661 -1.493 1.904 Atomic orbital electron populations 1.86618 1.17483 1.79904 1.49228 1.24074 0.83469 1.09786 0.95691 0.95208 0.91665 0.75261 0.82578 1.25535 1.13115 0.99289 1.04794 1.21325 0.97147 0.93043 0.91723 1.66468 1.17143 1.33533 1.10432 1.23759 0.94987 0.93488 0.92312 1.43956 1.54341 1.14125 1.19427 1.22201 0.99020 0.83594 0.91558 0.85862 1.23627 1.00367 0.97823 0.95929 1.23797 0.86226 0.99249 0.90551 0.87664 1.86146 1.42104 1.26288 1.66773 1.19029 0.94004 0.84051 0.94626 1.20494 0.97828 0.98651 1.00239 1.21029 0.98808 0.91620 0.98409 1.21130 0.98275 0.98956 0.99304 1.21003 0.95484 0.96792 0.96538 1.21283 1.03866 0.92812 1.04797 1.24111 0.99389 1.01064 0.96280 1.84018 1.50997 1.13700 1.17228 0.77534 0.85709 1.16757 1.16072 0.80678 0.74590 0.89295 0.88115 0.85208 0.85248 0.85775 0.85688 0.85370 0.88421 0.90038 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.52 12.87 -35.23 -0.45 -0.98 16 2 C -0.02 0.00 2.99 36.01 0.11 0.11 16 3 Si 0.65 -0.45 31.05 -169.99 -5.28 -5.73 16 4 C -0.30 -0.16 5.74 -36.02 -0.21 -0.37 16 5 C 0.12 0.19 11.22 -19.14 -0.21 -0.02 16 6 N -0.55 -1.38 9.83 -15.21 -0.15 -1.53 16 7 C 0.32 0.29 8.09 -87.68 -0.71 -0.42 16 8 N -0.68 0.80 5.51 -55.00 -0.30 0.50 16 9 C 0.14 -0.21 4.36 -67.12 -0.29 -0.50 16 10 H 0.12 -0.06 7.67 -51.93 -0.40 -0.46 16 11 C -0.14 0.31 7.66 -25.92 -0.20 0.11 16 12 C 0.06 -0.06 3.63 -25.92 -0.09 -0.15 16 13 H 0.11 -0.19 6.04 -51.93 -0.31 -0.51 16 14 O -0.30 -0.46 10.15 -19.44 -0.20 -0.66 16 15 C 0.13 0.25 6.68 -39.22 -0.26 -0.01 16 16 C -0.15 -0.25 9.99 -39.43 -0.39 -0.64 16 17 C -0.08 -0.06 10.04 -39.60 -0.40 -0.46 16 18 C -0.16 -0.10 10.04 -39.56 -0.40 -0.50 16 19 C -0.08 -0.06 10.04 -39.60 -0.40 -0.45 16 20 C -0.21 -0.22 9.01 -39.43 -0.36 -0.58 16 21 C -0.17 0.19 7.71 -25.92 -0.20 -0.01 16 22 S 0.09 -0.02 20.57 -107.50 -2.21 -2.23 16 23 H 0.38 -0.61 8.70 45.56 0.40 -0.21 16 24 H 0.13 -0.15 7.96 -51.93 -0.41 -0.56 16 25 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 26 H -0.24 -0.47 7.11 56.52 0.40 -0.07 16 27 H 0.18 0.09 8.06 -52.49 -0.42 -0.33 16 28 H 0.42 -1.31 8.85 -40.82 -0.36 -1.67 16 29 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 30 H 0.10 -0.25 8.12 -51.93 -0.42 -0.68 16 31 H 0.13 0.07 8.06 -52.49 -0.42 -0.36 16 32 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 33 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 34 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 35 H 0.13 -0.08 5.95 -52.49 -0.31 -0.39 16 36 H 0.10 -0.05 8.14 -51.93 -0.42 -0.48 16 37 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 LS Contribution 329.41 15.07 4.96 4.96 Total: 0.00 -5.98 329.41 -12.05 -18.03 By element: Atomic # 1 Polarization: -4.08 SS G_CDS: -4.40 Total: -8.48 kcal Atomic # 6 Polarization: 0.13 SS G_CDS: -4.01 Total: -3.88 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -0.45 Total: -1.03 kcal Atomic # 8 Polarization: -0.98 SS G_CDS: -0.65 Total: -1.63 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.28 Total: -5.73 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.21 Total: -2.23 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -5.98 -12.05 -18.03 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12060302_15704118.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.644 kcal (2) G-P(sol) polarization free energy of solvation -5.982 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.661 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.046 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.028 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds