Wall clock time and date at job start Mon Mar 8 2021 05:29:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33327 * 125.94972 * 2 1 4 4 C 1.50698 * 122.71120 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.47252 * 329.99833 * 4 3 2 6 6 Si 1.86302 * 109.47282 * 209.99696 * 4 3 2 7 7 H 1.48498 * 109.46844 * 59.99774 * 6 4 3 8 8 H 1.48492 * 109.47084 * 180.02562 * 6 4 3 9 9 H 1.48500 * 109.46910 * 300.00072 * 6 4 3 10 10 N 1.32119 * 114.57682 * 179.75256 * 3 2 1 11 11 C 1.29684 * 116.86578 * 0.47790 * 10 3 2 12 12 N 1.38611 * 124.94802 * 179.81329 * 11 10 3 13 13 C 1.47899 * 111.00027 * 59.59344 * 12 11 10 14 14 C 1.53997 * 107.05889 * 145.84243 * 13 12 11 15 15 C 1.54593 * 105.13807 * 358.77516 * 14 13 12 16 16 O 1.42906 * 110.72554 * 219.68070 * 15 14 13 17 17 Si 1.63092 * 114.00130 * 268.55103 * 16 15 14 18 18 C 1.86304 * 109.47174 * 299.99515 * 17 16 15 19 19 C 1.86302 * 109.47406 * 59.99545 * 17 16 15 20 20 C 1.86297 * 109.47212 * 179.97438 * 17 16 15 21 21 C 1.53000 * 109.47290 * 59.99674 * 20 17 16 22 22 C 1.53001 * 109.47354 * 179.97438 * 20 17 16 23 23 C 1.53003 * 109.47159 * 299.99804 * 20 17 16 24 24 C 1.48538 * 111.00038 * 176.99107 * 12 11 10 25 25 S 1.70968 * 110.10154 * 359.54609 * 11 10 3 26 26 H 1.09000 * 109.47014 * 179.97438 * 1 2 3 27 27 H 1.08994 * 109.46966 * 299.97230 * 1 2 3 28 28 H 1.09001 * 109.47057 * 59.97219 * 1 2 3 29 29 H 1.09006 * 109.46980 * 89.99669 * 4 3 2 30 30 H 0.96703 * 114.00098 * 299.99824 * 5 4 3 31 31 H 1.09004 * 109.91646 * 26.49270 * 13 12 11 32 32 H 1.08998 * 109.92144 * 265.19661 * 13 12 11 33 33 H 1.09004 * 110.30998 * 117.69119 * 14 13 12 34 34 H 1.08998 * 110.30811 * 239.85930 * 14 13 12 35 35 H 1.09007 * 110.72450 * 96.40308 * 15 14 13 36 36 H 1.09005 * 109.46891 * 60.00561 * 18 17 16 37 37 H 1.08997 * 109.47386 * 179.97438 * 18 17 16 38 38 H 1.08996 * 109.46999 * 300.00579 * 18 17 16 39 39 H 1.08998 * 109.46974 * 60.00015 * 19 17 16 40 40 H 1.09006 * 109.47219 * 179.97438 * 19 17 16 41 41 H 1.08996 * 109.46956 * 300.00177 * 19 17 16 42 42 H 1.08998 * 109.47029 * 60.00226 * 21 20 17 43 43 H 1.08998 * 109.47530 * 179.97438 * 21 20 17 44 44 H 1.09006 * 109.47073 * 300.00312 * 21 20 17 45 45 H 1.09005 * 109.47279 * 60.00068 * 22 20 17 46 46 H 1.09003 * 109.46971 * 179.97438 * 22 20 17 47 47 H 1.08998 * 109.47128 * 299.99874 * 22 20 17 48 48 H 1.09006 * 109.46979 * 59.99825 * 23 20 17 49 49 H 1.08998 * 109.47000 * 179.97438 * 23 20 17 50 50 H 1.08995 * 109.46928 * 300.00220 * 23 20 17 51 51 H 1.09007 * 110.66246 * 318.71288 * 24 12 11 52 52 H 1.08993 * 110.66671 * 81.67438 * 24 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0793 0.0000 4 6 1.7414 2.4830 0.0006 5 8 0.4810 2.5023 -0.6726 6 14 2.9320 3.6152 -0.8777 7 1 3.1117 3.1545 -2.2779 8 1 2.3919 4.9985 -0.8766 9 1 4.2417 3.5952 -0.1781 10 7 3.5850 0.8188 0.0052 11 6 3.9314 -0.4309 -0.0001 12 7 5.2384 -0.8925 0.0003 13 6 5.9686 -0.4158 1.1949 14 6 6.9529 -1.5297 1.5972 15 6 6.7108 -2.6689 0.5805 16 8 6.7656 -3.9428 1.2257 17 14 8.2476 -4.6235 1.2251 18 6 8.8160 -4.8724 -0.5316 19 6 9.4450 -3.5057 2.1127 20 6 8.1752 -6.2699 2.0940 21 6 7.1918 -7.1882 1.3656 22 6 9.5654 -6.9089 2.0929 23 6 7.7087 -6.0650 3.5368 24 6 5.2790 -2.3759 0.0661 25 16 2.5412 -1.4260 -0.0001 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5134 0.8902 28 1 -0.3633 0.5143 -0.8897 29 1 1.6095 2.8211 1.0284 30 1 0.5230 2.2128 -1.5943 31 1 5.2675 -0.2283 2.0083 32 1 6.5166 0.4956 0.9560 33 1 7.9797 -1.1711 1.5261 34 1 6.7409 -1.8745 2.6092 35 1 7.4318 -2.6174 -0.2355 36 1 8.8586 -3.9090 -1.0396 37 1 9.8066 -5.3270 -0.5320 38 1 8.1154 -5.5264 -1.0509 39 1 9.1125 -3.3602 3.1404 40 1 10.4354 -3.9610 2.1126 41 1 9.4874 -2.5424 1.6046 42 1 7.5241 -7.3342 0.3379 43 1 7.1497 -8.1516 1.8737 44 1 6.2012 -6.7331 1.3661 45 1 10.2663 -6.2548 2.6116 46 1 9.5230 -7.8719 2.6017 47 1 9.8973 -7.0549 1.0650 48 1 6.7182 -5.6100 3.5372 49 1 7.6659 -7.0283 4.0450 50 1 8.4092 -5.4108 4.0556 51 1 4.5339 -2.7503 0.7682 52 1 5.1263 -2.8091 -0.9223 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12102092_15704122.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:29:32 Heat of formation + Delta-G solvation = -77.064967 kcal Electronic energy + Delta-G solvation = -28763.502185 eV Core-core repulsion = 25013.100863 eV Total energy + Delta-G solvation = -3750.401321 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 358.166 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.52814 -40.36977 -37.94632 -37.04543 -36.90947 -33.47080 -31.83346 -30.01357 -29.52329 -29.14043 -28.88610 -27.93644 -27.46556 -25.69269 -24.83771 -22.77174 -22.37927 -20.56002 -20.08275 -19.23221 -18.45408 -18.03536 -17.59803 -16.82023 -16.26616 -16.05578 -15.87191 -15.38032 -15.28958 -15.14124 -14.91315 -14.82313 -14.70278 -14.62800 -14.45138 -14.11307 -13.93600 -13.67449 -13.58220 -13.51645 -13.44697 -13.37474 -13.16647 -13.01130 -12.99556 -12.80241 -12.69051 -12.48795 -12.40970 -12.13142 -12.01198 -11.89283 -11.80247 -11.72369 -11.62439 -11.35697 -10.98712 -10.64493 -10.49107 -10.32167 -10.16329 -10.01438 -9.07247 -0.27664 0.18136 0.66138 1.20696 1.21466 1.63536 1.65249 1.73391 1.76384 1.93756 2.16069 2.21026 2.42627 3.17936 3.33609 3.38792 3.56998 3.73890 3.92130 4.02889 4.03539 4.04235 4.06982 4.24389 4.31275 4.39564 4.44112 4.53823 4.58772 4.59700 4.63195 4.65126 4.66688 4.70223 4.73676 4.74182 4.78135 4.79886 4.84467 4.92484 4.96365 5.02586 5.03115 5.03782 5.13862 5.20712 5.27313 5.34294 5.37155 5.44908 5.47041 5.52523 5.60634 6.40533 6.78468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 C -0.209 4.209 3 C 0.038 3.962 4 C -0.045 4.045 5 O -0.534 6.534 6 Si 0.979 3.021 7 H -0.259 1.259 8 H -0.260 1.260 9 H -0.244 1.244 10 N -0.487 5.487 11 C 0.223 3.777 12 N -0.424 5.424 13 C 0.051 3.949 14 C -0.164 4.164 15 C 0.119 3.881 16 O -0.614 6.614 17 Si 1.285 2.715 18 C -0.512 4.512 19 C -0.510 4.510 20 C -0.374 4.374 21 C -0.135 4.135 22 C -0.137 4.137 23 C -0.134 4.134 24 C 0.027 3.973 25 S 0.106 5.894 26 H 0.061 0.939 27 H 0.081 0.919 28 H 0.086 0.914 29 H 0.125 0.875 30 H 0.377 0.623 31 H 0.064 0.936 32 H 0.099 0.901 33 H 0.090 0.910 34 H 0.093 0.907 35 H 0.086 0.914 36 H 0.067 0.933 37 H 0.075 0.925 38 H 0.073 0.927 39 H 0.073 0.927 40 H 0.074 0.926 41 H 0.068 0.932 42 H 0.054 0.946 43 H 0.054 0.946 44 H 0.059 0.941 45 H 0.056 0.944 46 H 0.057 0.943 47 H 0.056 0.944 48 H 0.059 0.941 49 H 0.054 0.946 50 H 0.054 0.946 51 H 0.081 0.919 52 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.740 -2.062 0.433 2.233 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.331 4.331 3 C -0.093 4.093 4 C -0.158 4.158 5 O -0.338 6.338 6 Si 0.800 3.200 7 H -0.182 1.182 8 H -0.185 1.185 9 H -0.167 1.167 10 N -0.207 5.207 11 C -0.147 4.147 12 N -0.146 5.146 13 C -0.077 4.077 14 C -0.202 4.202 15 C 0.061 3.939 16 O -0.573 6.573 17 Si 1.416 2.584 18 C -0.614 4.614 19 C -0.612 4.612 20 C -0.418 4.418 21 C -0.192 4.192 22 C -0.194 4.194 23 C -0.191 4.191 24 C -0.101 4.101 25 S 0.359 5.641 26 H 0.080 0.920 27 H 0.100 0.900 28 H 0.104 0.896 29 H 0.142 0.858 30 H 0.224 0.776 31 H 0.082 0.918 32 H 0.117 0.883 33 H 0.109 0.891 34 H 0.111 0.889 35 H 0.103 0.897 36 H 0.087 0.913 37 H 0.094 0.906 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.088 0.912 42 H 0.073 0.927 43 H 0.073 0.927 44 H 0.078 0.922 45 H 0.075 0.925 46 H 0.076 0.924 47 H 0.075 0.925 48 H 0.078 0.922 49 H 0.073 0.927 50 H 0.073 0.927 51 H 0.099 0.901 52 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 1.392 -1.852 0.210 2.326 hybrid contribution -0.080 -0.193 0.252 0.327 sum 1.312 -2.044 0.462 2.473 Atomic orbital electron populations 1.20263 0.85995 1.02076 1.04180 1.25499 1.01823 0.93418 1.12343 1.20368 0.86907 0.97677 1.04365 1.24472 0.92578 0.94949 1.03778 1.86536 1.28839 1.89554 1.28912 0.85188 0.78100 0.76979 0.79743 1.18239 1.18469 1.16690 1.65991 1.17014 1.17459 1.20211 1.25153 0.94151 0.92023 1.03328 1.61090 1.06413 1.08525 1.38566 1.22946 0.96066 0.99274 0.89365 1.23214 1.00792 0.95067 1.01125 1.22261 0.96131 0.81800 0.93722 1.85386 1.60456 1.34749 1.76665 0.76764 0.52669 0.63709 0.65208 1.27037 1.06975 1.04966 1.22395 1.27128 1.13350 1.11338 1.09405 1.25777 0.98060 1.14925 1.02997 1.21521 0.98651 0.99297 0.99716 1.21560 0.95067 1.01008 1.01801 1.21516 1.01115 1.01837 0.94671 1.23626 0.98325 0.84474 1.03668 1.84242 0.98262 1.11186 1.70420 0.92039 0.90012 0.89572 0.85776 0.77569 0.91792 0.88289 0.89148 0.88853 0.89654 0.91349 0.90567 0.90753 0.90807 0.90687 0.91244 0.92660 0.92731 0.92163 0.92487 0.92437 0.92482 0.92208 0.92738 0.92677 0.90131 0.87626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.04 8.91 36.01 0.32 0.36 16 2 C -0.21 -0.28 6.50 -36.02 -0.23 -0.52 16 3 C 0.04 0.09 5.91 -84.18 -0.50 -0.41 16 4 C -0.04 -0.03 2.94 36.00 0.11 0.08 16 5 O -0.53 0.10 10.17 -35.23 -0.36 -0.26 16 6 Si 0.98 1.49 27.37 -169.99 -4.65 -3.16 16 7 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 8 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 9 H -0.24 -0.77 7.11 56.52 0.40 -0.37 16 10 N -0.49 -1.75 8.86 -11.36 -0.10 -1.85 16 11 C 0.22 0.55 6.54 -87.68 -0.57 -0.02 16 12 N -0.42 -0.52 5.36 -171.41 -0.92 -1.44 16 13 C 0.05 0.00 6.57 -2.75 -0.02 -0.02 16 14 C -0.16 0.28 5.67 -25.37 -0.14 0.14 16 15 C 0.12 -0.15 2.97 -24.87 -0.07 -0.23 16 16 O -0.61 0.59 8.35 -35.23 -0.29 0.29 16 17 Si 1.28 -2.56 8.14 -169.99 -1.38 -3.94 16 18 C -0.51 0.74 8.57 101.05 0.87 1.60 16 19 C -0.51 0.91 8.14 101.05 0.82 1.73 16 20 C -0.37 0.40 0.53 -90.62 -0.05 0.35 16 21 C -0.13 0.09 7.85 37.16 0.29 0.38 16 22 C -0.14 0.17 7.85 37.16 0.29 0.46 16 23 C -0.13 0.09 7.85 37.16 0.29 0.39 16 24 C 0.03 -0.01 5.50 -1.90 -0.01 -0.02 16 25 S 0.11 0.11 20.98 -107.50 -2.26 -2.14 16 26 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.09 -0.14 6.39 -51.93 -0.33 -0.47 16 29 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 30 H 0.38 -1.10 8.13 45.56 0.37 -0.73 16 31 H 0.06 0.03 7.75 -51.93 -0.40 -0.38 16 32 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.09 -0.26 6.92 -51.93 -0.36 -0.62 16 34 H 0.09 -0.18 8.07 -51.93 -0.42 -0.60 16 35 H 0.09 -0.21 6.31 -51.92 -0.33 -0.54 16 36 H 0.07 -0.11 7.12 -51.93 -0.37 -0.48 16 37 H 0.08 -0.12 7.79 -51.93 -0.40 -0.53 16 38 H 0.07 -0.09 7.79 -51.93 -0.40 -0.49 16 39 H 0.07 -0.12 7.79 -51.93 -0.40 -0.52 16 40 H 0.07 -0.14 7.79 -51.93 -0.40 -0.54 16 41 H 0.07 -0.15 6.55 -51.93 -0.34 -0.49 16 42 H 0.05 -0.07 7.80 -51.93 -0.40 -0.47 16 43 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.06 -0.03 7.97 -51.93 -0.41 -0.45 16 45 H 0.06 -0.10 7.79 -51.93 -0.40 -0.51 16 46 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 47 H 0.06 -0.10 7.79 -51.93 -0.40 -0.51 16 48 H 0.06 -0.03 7.97 -51.93 -0.41 -0.45 16 49 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 50 H 0.05 -0.07 7.79 -51.93 -0.40 -0.47 16 51 H 0.08 -0.03 6.88 -51.93 -0.36 -0.38 16 52 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 410.18 15.07 6.18 6.18 Total: 0.00 -5.05 410.18 -11.16 -16.21 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -8.77 Total: -14.14 kcal Atomic # 6 Polarization: 2.87 SS G_CDS: 1.39 Total: 4.26 kcal Atomic # 7 Polarization: -2.28 SS G_CDS: -1.02 Total: -3.30 kcal Atomic # 8 Polarization: 0.68 SS G_CDS: -0.65 Total: 0.03 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -6.04 Total: -7.10 kcal Atomic # 16 Polarization: 0.11 SS G_CDS: -2.26 Total: -2.14 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -5.05 -11.16 -16.21 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12102092_15704122.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.857 kcal (2) G-P(sol) polarization free energy of solvation -5.046 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.902 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.208 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.065 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds