Wall clock time and date at job start Mon Mar 8 2021 03:49:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86301 * 109.47170 * 2 1 4 4 C 1.50700 * 109.47324 * 240.00033 * 2 1 3 5 5 C 1.33332 * 125.95095 * 300.00451 * 4 2 1 6 6 N 1.32126 * 114.57816 * 179.97438 * 5 4 2 7 7 C 1.29683 * 116.86274 * 359.97438 * 6 5 4 8 8 N 1.38614 * 124.94251 * 179.97438 * 7 6 5 9 9 C 1.46502 * 120.00178 * 0.29516 * 8 7 6 10 10 H 1.09001 * 112.84666 * 46.33834 * 9 8 7 11 11 C 1.53782 * 113.61399 * 177.63884 * 9 8 7 12 12 C 1.53781 * 87.08032 * 89.11646 * 11 9 8 13 13 H 1.08998 * 113.61463 * 139.97957 * 12 11 9 14 14 N 1.46497 * 113.61818 * 270.88282 * 12 11 9 15 15 C 1.34774 * 120.00467 * 255.63141 * 14 12 11 16 16 O 1.21518 * 119.99486 * 359.97438 * 15 14 12 17 17 O 1.34631 * 120.00732 * 179.97438 * 15 14 12 18 18 C 1.45199 * 117.00578 * 179.97438 * 17 15 14 19 19 C 1.50699 * 109.47270 * 179.97438 * 18 17 15 20 20 C 1.38239 * 120.00025 * 269.72796 * 19 18 17 21 21 C 1.38233 * 119.99623 * 179.79153 * 20 19 18 22 22 C 1.38236 * 120.00061 * 0.43623 * 21 20 19 23 23 C 1.38236 * 119.99966 * 359.81707 * 22 21 20 24 24 C 1.38231 * 119.99764 * 90.00180 * 19 18 17 25 25 C 1.53774 * 113.61607 * 275.13757 * 9 8 7 26 26 S 1.70963 * 110.10626 * 0.24274 * 7 6 5 27 27 H 0.96694 * 113.99671 * 300.00293 * 1 2 3 28 28 H 1.09004 * 109.47105 * 120.00231 * 2 1 3 29 29 H 1.48502 * 109.99948 * 178.67774 * 3 2 1 30 30 H 1.48494 * 110.00091 * 299.99838 * 3 2 1 31 31 H 1.07993 * 122.70742 * 359.97378 * 5 4 2 32 32 H 0.97004 * 119.99782 * 180.02562 * 8 7 6 33 33 H 1.08997 * 113.61350 * 203.67022 * 11 9 8 34 34 H 1.09000 * 113.61560 * 334.57326 * 11 9 8 35 35 H 0.97004 * 119.99878 * 75.62672 * 14 12 11 36 36 H 1.08998 * 109.46975 * 300.00288 * 18 17 15 37 37 H 1.09006 * 109.46920 * 60.00021 * 18 17 15 38 38 H 1.08002 * 120.00071 * 0.02562 * 20 19 18 39 39 H 1.07999 * 119.99967 * 180.28010 * 21 20 19 40 40 H 1.08000 * 119.99685 * 179.83791 * 22 21 20 41 41 H 1.08007 * 119.99826 * 179.97438 * 23 22 21 42 42 H 1.08006 * 120.00525 * 359.97438 * 24 19 18 43 43 H 1.09003 * 113.61325 * 25.42930 * 25 9 8 44 44 H 1.08995 * 113.61682 * 156.33454 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6835 -1.9788 -1.5581 6 7 2.2377 -2.3722 -2.6911 7 6 2.9416 -1.4937 -3.3351 8 7 3.5948 -1.7251 -4.5356 9 6 3.5124 -3.0419 -5.1725 10 1 2.4964 -3.4357 -5.2003 11 6 4.2422 -3.1193 -6.5238 12 6 5.4984 -3.5213 -5.7332 13 1 6.0861 -4.3027 -6.2150 14 7 6.3107 -2.3808 -5.3023 15 6 7.4612 -2.0927 -5.9425 16 8 7.8250 -2.7792 -6.8768 17 8 8.2074 -1.0442 -5.5469 18 6 9.4343 -0.7935 -6.2818 19 6 10.1305 0.4104 -5.7014 20 6 9.8561 1.6722 -6.1949 21 6 10.4916 2.7769 -5.6595 22 6 11.4082 2.6189 -4.6368 23 6 11.6864 1.3566 -4.1470 24 6 11.0478 0.2523 -4.6794 25 6 4.5487 -4.0477 -4.6442 26 16 2.9526 -0.0110 -2.4840 27 1 -0.3932 0.4417 0.7650 28 1 1.7924 -0.5139 0.8900 29 1 3.5346 1.7703 0.0322 30 1 1.5616 2.4679 -1.2085 31 1 1.0786 -2.6319 -0.9467 32 1 4.1033 -1.0140 -4.9560 33 1 3.8674 -3.9065 -7.1780 34 1 4.3326 -2.1567 -7.0271 35 1 6.0204 -1.8330 -4.5563 36 1 10.0873 -1.6630 -6.2061 37 1 9.1984 -0.6064 -7.3295 38 1 9.1424 1.7953 -6.9961 39 1 10.2739 3.7632 -6.0419 40 1 11.9066 3.4818 -4.2204 41 1 12.4029 1.2331 -3.3482 42 1 11.2652 -0.7339 -4.2966 43 1 4.8865 -3.8344 -3.6300 44 1 4.2578 -5.0887 -4.7845 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12109460_15704118.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:49:30 Heat of formation + Delta-G solvation = 9.341898 kcal Electronic energy + Delta-G solvation = -28923.444933 eV Core-core repulsion = 24742.833649 eV Total energy + Delta-G solvation = -4180.611284 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.113 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -41.91861 -40.99472 -40.32728 -39.88241 -37.85098 -37.38037 -35.56693 -34.18886 -33.01734 -31.93921 -31.35307 -27.77520 -27.16242 -26.70764 -25.78456 -24.32153 -23.62796 -22.90590 -22.22763 -21.33913 -20.63517 -19.69611 -19.38115 -18.48942 -18.23225 -17.74780 -17.56121 -17.40524 -16.81383 -16.58649 -16.16918 -16.08744 -16.00788 -15.74141 -15.59855 -15.23481 -14.69519 -14.55341 -14.48220 -14.30002 -14.24771 -13.96824 -13.65317 -13.56016 -13.35610 -13.10640 -12.82588 -12.51072 -12.37749 -12.17585 -12.14369 -12.07318 -11.65074 -11.63951 -11.58823 -11.16430 -10.66703 -10.36719 -10.31555 -10.17041 -9.94654 -9.92948 -8.81735 -5.23938 -0.09844 0.03567 0.07382 0.37948 0.61706 1.18330 1.20395 1.55548 1.74696 1.90422 1.98317 2.01023 2.70563 3.15841 3.16778 3.37213 3.41455 3.59156 3.61190 3.69720 3.74504 3.92898 3.98228 4.00424 4.11791 4.16552 4.26869 4.38641 4.47258 4.51225 4.52972 4.60386 4.61362 4.64056 4.72747 4.77739 4.82747 4.90580 4.99974 5.06424 5.27248 5.33323 5.42532 5.49175 5.49887 5.78402 5.90103 5.93346 6.25956 6.56244 6.94636 7.25794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.017 4.017 3 Si 0.667 3.333 4 C -0.259 4.259 5 C 0.122 3.878 6 N -0.538 5.538 7 C 0.328 3.672 8 N -0.681 5.681 9 C 0.136 3.864 10 H 0.101 0.899 11 C -0.155 4.155 12 C 0.134 3.866 13 H 0.112 0.888 14 N -0.695 5.695 15 C 0.649 3.351 16 O -0.566 6.566 17 O -0.366 6.366 18 C 0.131 3.869 19 C -0.103 4.103 20 C -0.093 4.093 21 C -0.123 4.123 22 C -0.106 4.106 23 C -0.123 4.123 24 C -0.093 4.093 25 C -0.152 4.152 26 S 0.071 5.929 27 H 0.384 0.616 28 H 0.082 0.918 29 H -0.242 1.242 30 H -0.239 1.239 31 H 0.179 0.821 32 H 0.413 0.587 33 H 0.116 0.884 34 H 0.080 0.920 35 H 0.404 0.596 36 H 0.082 0.918 37 H 0.082 0.918 38 H 0.125 0.875 39 H 0.127 0.873 40 H 0.126 0.874 41 H 0.127 0.873 42 H 0.125 0.875 43 H 0.080 0.920 44 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.178 2.804 3.691 4.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.131 4.131 3 Si 0.567 3.433 4 C -0.381 4.381 5 C -0.029 4.029 6 N -0.263 5.263 7 C -0.042 4.042 8 N -0.322 5.322 9 C 0.029 3.971 10 H 0.119 0.881 11 C -0.194 4.194 12 C 0.029 3.971 13 H 0.130 0.870 14 N -0.354 5.354 15 C 0.402 3.598 16 O -0.454 6.454 17 O -0.280 6.280 18 C 0.057 3.943 19 C -0.103 4.103 20 C -0.112 4.112 21 C -0.141 4.141 22 C -0.124 4.124 23 C -0.141 4.141 24 C -0.111 4.111 25 C -0.191 4.191 26 S 0.320 5.680 27 H 0.231 0.769 28 H 0.100 0.900 29 H -0.166 1.166 30 H -0.162 1.162 31 H 0.196 0.804 32 H 0.251 0.749 33 H 0.134 0.866 34 H 0.098 0.902 35 H 0.240 0.760 36 H 0.100 0.900 37 H 0.100 0.900 38 H 0.143 0.857 39 H 0.145 0.855 40 H 0.144 0.856 41 H 0.145 0.855 42 H 0.143 0.857 43 H 0.099 0.901 44 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 1.056 3.066 1.745 3.683 hybrid contribution -0.362 -0.500 0.484 0.784 sum 0.694 2.567 2.229 3.470 Atomic orbital electron populations 1.86512 1.17101 1.81751 1.49789 1.23674 0.85507 1.09230 0.94666 0.95128 0.81821 0.78224 0.88175 1.24311 1.12637 0.97730 1.03388 1.21365 0.96814 0.92994 0.91679 1.66479 1.16753 1.32990 1.10101 1.23763 0.95161 0.93198 0.92091 1.43865 1.54805 1.14009 1.19546 1.21972 1.00179 0.82434 0.92526 0.88124 1.23826 0.95614 1.03984 0.96006 1.21961 0.90894 0.87640 0.96564 0.87014 1.44458 1.21093 1.33141 1.36722 1.18113 0.80789 0.79691 0.81181 1.91033 1.72250 1.52119 1.29973 1.86307 1.35534 1.46776 1.59383 1.21763 0.81668 0.96088 0.94801 1.19493 0.98459 0.93690 0.98694 1.21116 0.98732 0.91774 0.99532 1.21212 0.97041 0.98863 0.97027 1.21316 0.97273 0.97581 0.96273 1.21217 1.00100 0.92538 1.00261 1.21124 0.95722 0.99366 0.94899 1.23789 0.95408 1.00649 0.99303 1.84162 1.51571 1.14697 1.17597 0.76851 0.89999 1.16574 1.16243 0.80394 0.74870 0.86592 0.90167 0.75976 0.89964 0.89982 0.85720 0.85524 0.85608 0.85505 0.85690 0.90084 0.86901 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.03 12.84 -35.23 -0.45 -0.43 16 2 C -0.02 0.00 2.98 36.01 0.11 0.11 16 3 Si 0.67 -0.56 31.05 -169.99 -5.28 -5.84 16 4 C -0.26 -0.62 5.78 -36.02 -0.21 -0.83 16 5 C 0.12 0.34 11.22 -19.14 -0.21 0.13 16 6 N -0.54 -1.80 10.14 -15.21 -0.15 -1.96 16 7 C 0.33 0.65 8.09 -87.68 -0.71 -0.06 16 8 N -0.68 0.29 4.48 -54.99 -0.25 0.04 16 9 C 0.14 -0.16 4.23 -67.12 -0.28 -0.44 16 10 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 11 C -0.15 0.31 7.57 -25.92 -0.20 0.12 16 12 C 0.13 -0.10 4.28 -67.12 -0.29 -0.39 16 13 H 0.11 0.03 7.54 -51.93 -0.39 -0.36 16 14 N -0.69 -0.16 4.97 -57.93 -0.29 -0.45 16 15 C 0.65 1.92 8.75 54.05 0.47 2.39 16 16 O -0.57 -3.29 15.77 -19.29 -0.30 -3.60 16 17 O -0.37 -0.89 10.25 -40.30 -0.41 -1.31 16 18 C 0.13 0.18 5.60 36.01 0.20 0.38 16 19 C -0.10 -0.13 5.52 -104.62 -0.58 -0.71 16 20 C -0.09 -0.07 9.70 -39.58 -0.38 -0.45 16 21 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 22 C -0.11 -0.01 10.05 -39.58 -0.40 -0.41 16 23 C -0.12 -0.04 10.05 -39.58 -0.40 -0.43 16 24 C -0.09 -0.08 9.70 -39.59 -0.38 -0.46 16 25 C -0.15 0.22 7.61 -25.92 -0.20 0.03 16 26 S 0.07 0.15 20.57 -107.50 -2.21 -2.06 16 27 H 0.38 -1.99 8.74 45.56 0.40 -1.60 16 28 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 29 H -0.24 -0.35 7.11 56.52 0.40 0.05 16 30 H -0.24 -0.58 7.11 56.52 0.40 -0.18 16 31 H 0.18 0.21 8.06 -52.49 -0.42 -0.21 16 32 H 0.41 -0.70 7.98 -40.82 -0.33 -1.02 16 33 H 0.12 -0.38 8.14 -51.93 -0.42 -0.80 16 34 H 0.08 -0.12 8.13 -51.93 -0.42 -0.54 16 35 H 0.40 -0.31 7.31 -40.82 -0.30 -0.61 16 36 H 0.08 0.09 8.08 -51.93 -0.42 -0.33 16 37 H 0.08 0.08 8.08 -51.93 -0.42 -0.34 16 38 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 39 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 40 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 41 H 0.13 -0.19 8.06 -52.48 -0.42 -0.61 16 42 H 0.13 -0.06 8.06 -52.48 -0.42 -0.48 16 43 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 44 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 LS Contribution 390.21 15.07 5.88 5.88 Total: 0.00 -9.11 390.21 -13.04 -22.15 By element: Atomic # 1 Polarization: -5.27 SS G_CDS: -5.72 Total: -10.99 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -3.85 Total: -1.45 kcal Atomic # 7 Polarization: -1.68 SS G_CDS: -0.69 Total: -2.36 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -1.17 Total: -5.33 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.28 Total: -5.84 kcal Atomic # 16 Polarization: 0.15 SS G_CDS: -2.21 Total: -2.06 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -9.11 -13.04 -22.15 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12109460_15704118.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.495 kcal (2) G-P(sol) polarization free energy of solvation -9.114 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.382 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.153 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds