Wall clock time and date at job start Mon Mar 8 2021 03:49:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.33330 * 125.95261 * 2 1 4 4 C 1.50699 * 122.70693 * 359.96097 * 3 2 1 5 5 O 1.42895 * 109.47255 * 113.36053 * 4 3 2 6 6 Si 1.86301 * 109.46851 * 233.35879 * 4 3 2 7 7 N 1.32118 * 114.58216 * 179.69350 * 3 2 1 8 8 C 1.29689 * 116.86305 * 0.26306 * 7 3 2 9 9 N 1.38607 * 124.94621 * 179.97438 * 8 7 3 10 10 C 1.46509 * 119.99894 * 180.02562 * 9 8 7 11 11 H 1.08996 * 112.84756 * 333.47398 * 10 9 8 12 12 C 1.53775 * 113.61328 * 104.78039 * 10 9 8 13 13 C 1.53783 * 87.08377 * 89.11554 * 12 10 9 14 14 H 1.08995 * 113.68988 * 139.98783 * 13 12 10 15 15 N 1.46493 * 113.61121 * 270.88462 * 13 12 10 16 16 C 1.34784 * 119.99742 * 183.94728 * 15 13 12 17 17 O 1.21504 * 119.99747 * 359.97438 * 16 15 13 18 18 O 1.34638 * 120.00160 * 179.97438 * 16 15 13 19 19 C 1.45195 * 116.99915 * 179.97438 * 18 16 15 20 20 C 1.50702 * 109.46887 * 180.02562 * 19 18 16 21 21 C 1.38241 * 119.99766 * 269.72391 * 20 19 18 22 22 C 1.38239 * 119.99630 * 179.78699 * 21 20 19 23 23 C 1.38242 * 120.00023 * 0.44581 * 22 21 20 24 24 C 1.38237 * 119.99626 * 359.81247 * 23 22 21 25 25 C 1.38230 * 120.00448 * 359.97438 * 24 23 22 26 26 C 1.53779 * 113.61376 * 202.27642 * 10 9 8 27 27 S 1.70965 * 110.10438 * 0.02562 * 8 7 3 28 28 H 1.09003 * 109.47133 * 84.74528 * 1 2 3 29 29 H 1.09005 * 109.47392 * 204.73638 * 1 2 3 30 30 H 1.08998 * 109.47513 * 324.74620 * 1 2 3 31 31 H 1.09001 * 109.47344 * 353.35515 * 4 3 2 32 32 H 0.96696 * 114.00266 * 59.99432 * 5 4 3 33 33 H 1.48503 * 110.00114 * 179.97438 * 6 4 3 34 34 H 1.48497 * 110.00128 * 301.31821 * 6 4 3 35 35 H 0.96996 * 120.00115 * 0.02562 * 9 8 7 36 36 H 1.09004 * 113.61278 * 203.66798 * 12 10 9 37 37 H 1.09004 * 113.61491 * 334.56698 * 12 10 9 38 38 H 0.97002 * 120.00547 * 3.94861 * 15 13 12 39 39 H 1.08995 * 109.47122 * 300.00124 * 19 18 16 40 40 H 1.09001 * 109.47119 * 60.00498 * 19 18 16 41 41 H 1.07992 * 120.00051 * 0.02562 * 21 20 19 42 42 H 1.07999 * 119.99920 * 180.27909 * 22 21 20 43 43 H 1.07997 * 119.99678 * 179.82846 * 23 22 21 44 44 H 1.08003 * 119.99476 * 180.02562 * 24 23 22 45 45 H 1.07995 * 120.00124 * 180.02562 * 25 24 23 46 46 H 1.09005 * 113.61462 * 25.43557 * 26 10 9 47 47 H 1.09001 * 113.61286 * 156.33743 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7413 2.4830 -0.0009 5 8 2.0649 3.1215 1.2358 6 14 2.4926 3.4422 -1.4102 7 7 3.5850 0.8188 0.0064 8 6 3.9314 -0.4309 0.0065 9 7 5.2384 -0.8925 0.0122 10 6 5.5065 -2.3329 0.0112 11 1 4.6982 -2.9142 0.4548 12 6 5.9794 -2.8704 -1.3498 13 6 7.4116 -2.5501 -0.8902 14 1 8.1424 -3.3070 -1.1748 15 7 7.8433 -1.1897 -1.2204 16 6 9.1040 -0.7981 -0.9482 17 8 9.8821 -1.5733 -0.4286 18 8 9.5010 0.4520 -1.2521 19 6 10.8722 0.8047 -0.9301 20 6 11.1329 2.2316 -1.3386 21 6 11.6082 2.5119 -2.6061 22 6 11.8432 3.8212 -2.9823 23 6 11.6117 4.8495 -2.0878 24 6 11.1415 4.5687 -0.8185 25 6 10.9023 3.2598 -0.4439 26 6 6.8984 -2.7007 0.5516 27 16 2.5413 -1.4261 -0.0028 28 1 -0.3633 0.0941 -1.0234 29 1 -0.3634 -0.9334 0.4300 30 1 -0.3634 0.8392 0.5931 31 1 0.6584 2.4499 -0.1204 32 1 3.0141 3.1861 1.4087 33 1 1.9594 4.8282 -1.4225 34 1 3.9713 3.4676 -1.2762 35 1 5.9754 -0.2620 0.0169 36 1 5.7928 -3.9355 -1.4873 37 1 5.6475 -2.2688 -2.1960 38 1 7.2220 -0.5708 -1.6348 39 1 11.0320 0.6993 0.1429 40 1 11.5529 0.1429 -1.4656 41 1 11.7922 1.7083 -3.3037 42 1 12.2102 4.0405 -3.9740 43 1 11.7980 5.8721 -2.3808 44 1 10.9603 5.3722 -0.1199 45 1 10.5346 3.0406 0.5476 46 1 7.3086 -1.9621 1.2404 47 1 6.9631 -3.7194 0.9339 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12109460_15704122.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:49:34 Heat of formation + Delta-G solvation = 0.849967 kcal Electronic energy + Delta-G solvation = -31269.399256 eV Core-core repulsion = 26932.882115 eV Total energy + Delta-G solvation = -4336.517141 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.129 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.97403 -41.08418 -40.62060 -39.96360 -37.68244 -37.33701 -35.73824 -34.37195 -33.08881 -32.62682 -31.91952 -29.00516 -27.72244 -27.12409 -26.10407 -25.44359 -24.42975 -23.60974 -22.85888 -22.19557 -21.39741 -20.34661 -19.89870 -18.90773 -18.26152 -17.95624 -17.84449 -17.50684 -17.36335 -16.84424 -16.50765 -16.36958 -16.13854 -15.93577 -15.85431 -15.57965 -15.28517 -14.71931 -14.47092 -14.40191 -14.23837 -14.14049 -13.95429 -13.82860 -13.73702 -13.58601 -13.53764 -13.33462 -13.21994 -12.81978 -12.40779 -12.30390 -12.16145 -12.12385 -11.81009 -11.68264 -11.63541 -11.61574 -11.13705 -10.67358 -10.44000 -10.34831 -10.01648 -9.92598 -9.91017 -8.68978 -4.86320 -0.01649 0.08166 0.15364 0.39993 0.75772 1.16171 1.33752 1.71047 1.79763 1.81130 1.87424 2.19557 2.71143 3.03482 3.12035 3.22860 3.37872 3.46039 3.62649 3.68933 3.75759 3.77262 4.00010 4.03109 4.13646 4.17882 4.19759 4.27102 4.32091 4.39102 4.40602 4.46868 4.49066 4.55049 4.62188 4.63866 4.65521 4.72032 4.89622 4.92208 4.92633 5.01882 5.15670 5.22523 5.29866 5.44123 5.50943 5.51827 5.56894 5.95298 6.17108 6.23264 6.45073 6.90783 7.24639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C -0.241 4.241 3 C 0.074 3.926 4 C -0.036 4.036 5 O -0.526 6.526 6 Si 0.697 3.303 7 N -0.546 5.546 8 C 0.317 3.683 9 N -0.680 5.680 10 C 0.123 3.877 11 H 0.101 0.899 12 C -0.157 4.157 13 C 0.139 3.861 14 H 0.105 0.895 15 N -0.698 5.698 16 C 0.650 3.350 17 O -0.564 6.564 18 O -0.364 6.364 19 C 0.131 3.869 20 C -0.103 4.103 21 C -0.093 4.093 22 C -0.123 4.123 23 C -0.106 4.106 24 C -0.123 4.123 25 C -0.093 4.093 26 C -0.153 4.153 27 S 0.111 5.889 28 H 0.077 0.923 29 H 0.068 0.932 30 H 0.079 0.921 31 H 0.122 0.878 32 H 0.380 0.620 33 H -0.257 1.257 34 H -0.251 1.251 35 H 0.411 0.589 36 H 0.118 0.882 37 H 0.086 0.914 38 H 0.408 0.592 39 H 0.081 0.919 40 H 0.082 0.918 41 H 0.125 0.875 42 H 0.127 0.873 43 H 0.126 0.874 44 H 0.127 0.873 45 H 0.124 0.876 46 H 0.083 0.917 47 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.699 -2.772 -3.242 4.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.364 4.364 3 C -0.057 4.057 4 C -0.148 4.148 5 O -0.332 6.332 6 Si 0.596 3.404 7 N -0.271 5.271 8 C -0.054 4.054 9 N -0.321 5.321 10 C 0.016 3.984 11 H 0.119 0.881 12 C -0.196 4.196 13 C 0.035 3.965 14 H 0.123 0.877 15 N -0.358 5.358 16 C 0.403 3.597 17 O -0.452 6.452 18 O -0.279 6.279 19 C 0.057 3.943 20 C -0.104 4.104 21 C -0.111 4.111 22 C -0.141 4.141 23 C -0.124 4.124 24 C -0.141 4.141 25 C -0.111 4.111 26 C -0.192 4.192 27 S 0.360 5.640 28 H 0.096 0.904 29 H 0.087 0.913 30 H 0.098 0.902 31 H 0.140 0.860 32 H 0.228 0.772 33 H -0.182 1.182 34 H -0.175 1.175 35 H 0.250 0.750 36 H 0.136 0.864 37 H 0.105 0.895 38 H 0.244 0.756 39 H 0.100 0.900 40 H 0.100 0.900 41 H 0.143 0.857 42 H 0.145 0.855 43 H 0.144 0.856 44 H 0.145 0.855 45 H 0.142 0.858 46 H 0.101 0.899 47 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -1.110 -3.238 -3.159 4.658 hybrid contribution 0.571 1.353 0.978 1.764 sum -0.539 -1.885 -2.181 2.933 Atomic orbital electron populations 1.20210 0.86738 1.03292 1.02986 1.25136 1.01175 0.93120 1.16924 1.19981 0.86725 0.97105 1.01867 1.24626 1.04562 0.89902 0.95744 1.86565 1.29725 1.79863 1.37046 0.94815 0.81211 0.80007 0.84398 1.66037 1.17463 1.16809 1.26811 1.23245 0.91629 0.91646 0.98846 1.43712 1.01901 1.06169 1.80364 1.22095 0.98947 0.79975 0.97379 0.88072 1.23905 0.93833 1.03665 0.98225 1.21850 0.96544 0.82370 0.95779 0.87679 1.44483 1.10449 1.14920 1.65980 1.18093 0.83040 0.80980 0.77631 1.91035 1.53189 1.53892 1.47100 1.86322 1.33263 1.29969 1.78321 1.21757 0.78466 0.92478 1.01565 1.19489 1.02270 0.93408 0.95187 1.21118 0.97779 0.97146 0.95054 1.21215 1.00336 0.92576 0.99994 1.21317 0.97809 0.99580 0.93726 1.21213 0.99613 0.96540 0.96771 1.21113 0.98039 0.92468 0.99488 1.23803 0.93722 1.04208 0.97508 1.83921 0.96247 1.10084 1.73750 0.90407 0.91267 0.90226 0.86023 0.77200 1.18170 1.17478 0.75016 0.86355 0.89545 0.75622 0.90032 0.89960 0.85681 0.85504 0.85618 0.85549 0.85753 0.89881 0.86610 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.10 9.70 36.00 0.35 0.45 16 2 C -0.24 -0.23 6.57 -36.02 -0.24 -0.47 16 3 C 0.07 0.15 5.19 -84.18 -0.44 -0.28 16 4 C -0.04 -0.05 2.84 36.01 0.10 0.05 16 5 O -0.53 -1.66 12.88 -35.23 -0.45 -2.11 16 6 Si 0.70 0.69 32.62 -169.99 -5.55 -4.86 16 7 N -0.55 -1.53 9.77 -11.36 -0.11 -1.65 16 8 C 0.32 0.37 8.24 -87.68 -0.72 -0.35 16 9 N -0.68 0.58 5.11 -54.99 -0.28 0.30 16 10 C 0.12 -0.35 4.27 -67.12 -0.29 -0.64 16 11 H 0.10 -0.34 7.15 -51.93 -0.37 -0.71 16 12 C -0.16 0.63 7.57 -25.92 -0.20 0.44 16 13 C 0.14 -0.30 4.02 -67.12 -0.27 -0.57 16 14 H 0.11 -0.15 8.02 -51.93 -0.42 -0.57 16 15 N -0.70 0.48 4.38 -57.94 -0.25 0.23 16 16 C 0.65 1.56 8.75 54.06 0.47 2.03 16 17 O -0.56 -2.95 16.05 -19.27 -0.31 -3.26 16 18 O -0.36 -0.83 10.25 -40.32 -0.41 -1.25 16 19 C 0.13 0.18 5.60 36.01 0.20 0.38 16 20 C -0.10 -0.14 5.52 -104.62 -0.58 -0.72 16 21 C -0.09 -0.08 9.70 -39.58 -0.38 -0.47 16 22 C -0.12 -0.06 10.05 -39.58 -0.40 -0.45 16 23 C -0.11 -0.04 10.05 -39.58 -0.40 -0.44 16 24 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 25 C -0.09 -0.10 9.70 -39.59 -0.38 -0.49 16 26 C -0.15 0.40 7.62 -25.92 -0.20 0.20 16 27 S 0.11 -0.01 21.73 -107.50 -2.34 -2.34 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 30 H 0.08 -0.11 7.18 -51.93 -0.37 -0.48 16 31 H 0.12 -0.04 6.34 -51.93 -0.33 -0.37 16 32 H 0.38 0.58 8.70 45.56 0.40 0.98 16 33 H -0.26 -0.88 7.11 56.52 0.40 -0.47 16 34 H -0.25 -1.04 7.11 56.52 0.40 -0.64 16 35 H 0.41 -0.18 7.27 -40.82 -0.30 -0.48 16 36 H 0.12 -0.68 8.14 -51.93 -0.42 -1.10 16 37 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.41 -0.69 7.86 -40.82 -0.32 -1.01 16 39 H 0.08 0.08 8.08 -51.93 -0.42 -0.33 16 40 H 0.08 0.08 8.08 -51.93 -0.42 -0.34 16 41 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 42 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 43 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 44 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 45 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 46 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 47 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 LS Contribution 410.23 15.07 6.18 6.18 Total: 0.00 -8.40 410.23 -13.68 -22.07 By element: Atomic # 1 Polarization: -5.11 SS G_CDS: -6.40 Total: -11.51 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -3.76 Total: -1.81 kcal Atomic # 7 Polarization: -0.47 SS G_CDS: -0.65 Total: -1.11 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -1.18 Total: -6.62 kcal Atomic # 14 Polarization: 0.69 SS G_CDS: -5.55 Total: -4.86 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.34 Total: -2.34 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -8.40 -13.68 -22.07 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12109460_15704122.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.924 kcal (2) G-P(sol) polarization free energy of solvation -8.397 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.074 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.850 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds