Wall clock time and date at job start Mon Mar 8 2021 03:49:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.47399 * 2 1 4 4 C 1.50705 * 109.46771 * 119.99931 * 2 1 3 5 5 C 1.37985 * 120.32508 * 245.02079 * 4 2 1 6 6 N 1.32013 * 120.89709 * 179.97438 * 5 4 2 7 7 C 1.32340 * 121.64744 * 359.72272 * 6 5 4 8 8 N 1.39140 * 119.71914 * 180.26587 * 7 6 5 9 9 C 1.46502 * 120.00047 * 0.27225 * 8 7 6 10 10 H 1.08998 * 112.85089 * 333.13231 * 9 8 7 11 11 C 1.53783 * 113.61311 * 104.43159 * 9 8 7 12 12 C 1.53789 * 87.07538 * 89.11856 * 11 9 8 13 13 H 1.09003 * 113.60979 * 139.98436 * 12 11 9 14 14 N 1.46495 * 113.69214 * 270.86909 * 12 11 9 15 15 C 1.34777 * 120.00265 * 182.68898 * 14 12 11 16 16 O 1.21507 * 119.99819 * 0.02562 * 15 14 12 17 17 O 1.34631 * 120.00211 * 180.02562 * 15 14 12 18 18 C 1.45199 * 117.00112 * 179.97438 * 17 15 14 19 19 C 1.50699 * 109.47324 * 180.02562 * 18 17 15 20 20 C 1.38242 * 120.00022 * 269.72827 * 19 18 17 21 21 C 1.38230 * 119.99831 * 179.76575 * 20 19 18 22 22 C 1.38230 * 120.00303 * 0.48527 * 21 20 19 23 23 C 1.38238 * 119.99875 * 359.78591 * 22 21 20 24 24 C 1.38230 * 120.00257 * 90.00014 * 19 18 17 25 25 C 1.53777 * 87.08343 * 25.43453 * 12 11 9 26 26 C 1.39347 * 120.56326 * 0.54197 * 7 6 5 27 27 F 1.35100 * 120.47309 * 179.74486 * 26 7 6 28 28 C 1.38443 * 119.05360 * 359.47748 * 26 7 6 29 29 H 0.96706 * 113.99548 * 59.99838 * 1 2 3 30 30 H 1.09000 * 109.47333 * 239.99573 * 2 1 3 31 31 H 1.48505 * 109.99590 * 59.99830 * 3 2 1 32 32 H 1.48495 * 109.99960 * 181.31470 * 3 2 1 33 33 H 1.07998 * 119.55256 * 0.02562 * 5 4 2 34 34 H 0.96993 * 120.00048 * 180.27192 * 8 7 6 35 35 H 1.08999 * 113.61560 * 203.66349 * 11 9 8 36 36 H 1.08993 * 113.61812 * 334.57541 * 11 9 8 37 37 H 0.97004 * 119.99700 * 2.69252 * 14 12 11 38 38 H 1.09006 * 109.47202 * 299.99867 * 18 17 15 39 39 H 1.09003 * 109.47125 * 60.00229 * 18 17 15 40 40 H 1.07997 * 119.99482 * 359.97438 * 20 19 18 41 41 H 1.08000 * 119.99714 * 180.25348 * 21 20 19 42 42 H 1.08005 * 119.99999 * 179.77110 * 22 21 20 43 43 H 1.08002 * 119.99655 * 179.97438 * 23 22 21 44 44 H 1.08003 * 119.99976 * 359.97438 * 24 19 18 45 45 H 1.08997 * 113.61609 * 220.02172 * 25 12 11 46 46 H 1.09000 * 113.61703 * 89.11377 * 25 12 11 47 47 H 1.08001 * 120.75472 * 180.27492 * 28 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.6376 -0.0200 2.1940 6 7 3.0824 -0.6309 3.2765 7 6 2.8667 -1.9200 3.4845 8 7 3.3491 -2.5220 4.6424 9 6 4.0871 -1.7281 5.6280 10 1 4.5912 -0.8682 5.1870 11 6 3.2666 -1.3866 6.8830 12 6 3.7807 -2.7063 7.4822 13 1 4.0371 -2.6353 8.5392 14 7 2.9313 -3.8607 7.1792 15 6 3.2338 -5.0719 7.6872 16 8 4.2109 -5.2062 8.3969 17 8 2.4534 -6.1329 7.4084 18 6 2.8400 -7.4063 7.9892 19 6 1.8570 -8.4688 7.5698 20 6 0.7410 -8.7228 8.3452 21 6 -0.1631 -9.6941 7.9579 22 6 0.0538 -10.4183 6.8007 23 6 1.1726 -10.1682 6.0283 24 6 2.0741 -9.1934 6.4128 25 6 4.9915 -2.5693 6.5441 26 6 2.1655 -2.6807 2.5510 27 9 1.9508 -3.9976 2.7628 28 6 1.6872 -2.0665 1.4062 29 1 -0.3933 0.4418 -0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 1.5615 2.4679 1.2085 32 1 3.5346 1.7702 -0.0320 33 1 2.8286 1.0346 2.0612 34 1 3.1967 -3.4674 4.7971 35 1 3.6218 -0.5005 7.4091 36 1 2.1903 -1.3751 6.7113 37 1 2.1510 -3.7534 6.6130 38 1 3.8370 -7.6767 7.6413 39 1 2.8443 -7.3236 9.0761 40 1 0.5739 -8.1600 9.2517 41 1 -1.0371 -9.8896 8.5616 42 1 -0.6508 -11.1797 6.5001 43 1 1.3423 -10.7344 5.1244 44 1 2.9480 -8.9977 5.8091 45 1 5.3077 -3.5125 6.0987 46 1 5.8183 -2.0066 6.9776 47 1 1.1364 -2.6289 0.6667 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12109460_17656566.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:49:37 Heat of formation + Delta-G solvation = -42.536252 kcal Electronic energy + Delta-G solvation = -33286.277868 eV Core-core repulsion = 28544.810756 eV Total energy + Delta-G solvation = -4741.467111 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.147 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -49.91131 -41.95979 -41.37271 -40.52816 -39.89458 -37.96550 -37.32518 -35.73951 -34.31147 -33.27370 -32.98842 -31.90111 -31.27298 -27.72834 -27.01873 -26.73027 -25.84330 -24.54275 -23.59046 -23.05547 -22.55316 -22.12846 -20.88404 -19.86407 -19.36475 -18.57821 -18.25016 -18.18518 -18.03448 -17.62700 -17.39692 -16.92520 -16.75096 -16.64989 -16.19979 -16.11080 -15.85445 -15.70198 -15.50037 -15.05741 -14.84076 -14.67487 -14.44925 -14.39520 -14.17020 -14.03600 -13.94235 -13.91025 -13.65659 -13.46694 -13.29505 -13.01031 -12.63119 -12.31980 -12.13933 -12.11221 -12.09950 -11.63263 -11.59553 -11.50524 -11.34925 -10.79744 -10.72567 -10.37370 -10.26750 -9.90761 -9.89083 -8.85052 -5.06560 -0.13669 0.07215 0.10714 0.41848 1.18034 1.20806 1.56942 1.76334 1.86115 1.87744 2.45877 2.73942 2.99019 3.10844 3.18831 3.24096 3.30517 3.43481 3.59905 3.67110 3.73245 3.78044 3.78610 3.98773 4.02049 4.02714 4.15342 4.20154 4.21740 4.30585 4.41553 4.51017 4.53889 4.55006 4.62748 4.64105 4.66205 4.73758 4.81238 4.84589 4.93346 4.94330 5.03766 5.22788 5.32097 5.40040 5.46160 5.52954 5.53672 5.88929 5.97154 6.08287 6.28218 6.53912 6.87024 7.29337 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.060 4.060 3 Si 0.682 3.318 4 C -0.161 4.161 5 C 0.142 3.858 6 N -0.507 5.507 7 C 0.390 3.610 8 N -0.702 5.702 9 C 0.131 3.869 10 H 0.111 0.889 11 C -0.154 4.154 12 C 0.136 3.864 13 H 0.102 0.898 14 N -0.698 5.698 15 C 0.649 3.351 16 O -0.564 6.564 17 O -0.365 6.365 18 C 0.131 3.869 19 C -0.103 4.103 20 C -0.093 4.093 21 C -0.123 4.123 22 C -0.106 4.106 23 C -0.123 4.123 24 C -0.093 4.093 25 C -0.157 4.157 26 C -0.017 4.017 27 F -0.131 7.131 28 C -0.035 4.035 29 H 0.384 0.616 30 H 0.076 0.924 31 H -0.247 1.247 32 H -0.251 1.251 33 H 0.156 0.844 34 H 0.411 0.589 35 H 0.114 0.886 36 H 0.080 0.920 37 H 0.406 0.594 38 H 0.081 0.919 39 H 0.082 0.918 40 H 0.125 0.875 41 H 0.127 0.873 42 H 0.126 0.874 43 H 0.127 0.873 44 H 0.125 0.875 45 H 0.079 0.921 46 H 0.112 0.888 47 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.912 2.328 -4.451 5.374 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.171 4.171 3 Si 0.583 3.417 4 C -0.166 4.166 5 C -0.015 4.015 6 N -0.224 5.224 7 C 0.152 3.848 8 N -0.336 5.336 9 C 0.025 3.975 10 H 0.129 0.871 11 C -0.193 4.193 12 C 0.032 3.968 13 H 0.120 0.880 14 N -0.358 5.358 15 C 0.402 3.598 16 O -0.452 6.452 17 O -0.279 6.279 18 C 0.057 3.943 19 C -0.103 4.103 20 C -0.111 4.111 21 C -0.141 4.141 22 C -0.124 4.124 23 C -0.141 4.141 24 C -0.111 4.111 25 C -0.197 4.197 26 C -0.043 4.043 27 F -0.110 7.110 28 C -0.061 4.061 29 H 0.232 0.768 30 H 0.094 0.906 31 H -0.171 1.171 32 H -0.176 1.176 33 H 0.172 0.828 34 H 0.250 0.750 35 H 0.132 0.868 36 H 0.099 0.901 37 H 0.242 0.758 38 H 0.100 0.900 39 H 0.100 0.900 40 H 0.143 0.857 41 H 0.145 0.855 42 H 0.144 0.856 43 H 0.145 0.855 44 H 0.143 0.857 45 H 0.097 0.903 46 H 0.130 0.870 47 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -0.283 2.981 -2.320 3.788 hybrid contribution -0.889 -1.738 -0.588 2.039 sum -1.172 1.243 -2.908 3.373 Atomic orbital electron populations 1.86499 1.17154 1.81859 1.49810 1.24476 0.85783 1.10296 0.96559 0.95049 0.81009 0.77937 0.87740 1.19946 1.04455 0.93884 0.98326 1.22179 0.92635 0.98941 0.87708 1.67270 1.24799 1.07407 1.22887 1.18383 0.90647 0.88942 0.86803 1.44349 1.59462 1.11713 1.18042 1.21928 0.92570 0.95171 0.87796 0.87065 1.23823 1.01791 0.96672 0.97014 1.21912 0.90871 0.83795 1.00203 0.88010 1.44495 1.31607 1.05381 1.54297 1.18096 0.81208 0.81410 0.79096 1.91033 1.28825 1.84799 1.40564 1.86317 1.53402 1.17455 1.70735 1.21757 0.96986 0.77174 0.98389 1.19491 0.96802 0.97218 0.96809 1.21117 0.93136 0.97350 0.99511 1.21207 0.99471 0.96290 0.97160 1.21311 0.97338 0.99083 0.94712 1.21211 0.94659 0.98122 1.00122 1.21114 0.99416 0.95385 0.95178 1.23822 0.97557 1.01434 0.96858 1.17984 1.08497 0.79592 0.98275 1.91506 1.93604 1.31037 1.94877 1.21277 0.95199 0.94335 0.95272 0.76828 0.90574 1.17124 1.17562 0.82776 0.75048 0.86778 0.90140 0.75803 0.90027 0.89991 0.85711 0.85532 0.85627 0.85532 0.85729 0.90282 0.86953 0.83051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.47 12.82 -35.23 -0.45 0.01 16 2 C -0.06 0.07 2.81 36.01 0.10 0.17 16 3 Si 0.68 -1.53 29.88 -169.99 -5.08 -6.61 16 4 C -0.16 -0.24 5.39 -104.47 -0.56 -0.80 16 5 C 0.14 0.32 9.84 -17.57 -0.17 0.15 16 6 N -0.51 -1.52 9.17 -12.36 -0.11 -1.63 16 7 C 0.39 0.98 7.49 -154.86 -1.16 -0.18 16 8 N -0.70 -0.52 5.12 -53.06 -0.27 -0.79 16 9 C 0.13 -0.06 4.31 -67.12 -0.29 -0.35 16 10 H 0.11 0.02 7.48 -51.93 -0.39 -0.37 16 11 C -0.15 0.24 7.58 -25.91 -0.20 0.05 16 12 C 0.14 -0.05 3.99 -67.12 -0.27 -0.32 16 13 H 0.10 0.02 8.05 -51.93 -0.42 -0.39 16 14 N -0.70 -0.42 4.35 -57.93 -0.25 -0.67 16 15 C 0.65 2.14 8.75 54.06 0.47 2.62 16 16 O -0.56 -3.46 16.07 -19.28 -0.31 -3.77 16 17 O -0.36 -1.05 10.25 -40.30 -0.41 -1.46 16 18 C 0.13 0.24 5.60 36.01 0.20 0.44 16 19 C -0.10 -0.17 5.52 -104.62 -0.58 -0.75 16 20 C -0.09 -0.11 9.70 -39.58 -0.38 -0.49 16 21 C -0.12 -0.08 10.05 -39.59 -0.40 -0.47 16 22 C -0.11 -0.05 10.05 -39.58 -0.40 -0.45 16 23 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 24 C -0.09 -0.11 9.70 -39.59 -0.38 -0.50 16 25 C -0.16 0.11 7.62 -25.92 -0.20 -0.09 16 26 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 27 F -0.13 -0.38 16.65 2.25 0.04 -0.34 16 28 C -0.03 -0.06 9.82 -39.26 -0.39 -0.44 16 29 H 0.38 -2.24 8.74 45.56 0.40 -1.84 16 30 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 31 H -0.25 -0.18 7.05 56.52 0.40 0.22 16 32 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 33 H 0.16 0.17 4.87 -52.49 -0.26 -0.08 16 34 H 0.41 0.20 6.66 -40.82 -0.27 -0.08 16 35 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 36 H 0.08 -0.07 8.13 -51.93 -0.42 -0.49 16 37 H 0.41 -0.19 7.94 -40.82 -0.32 -0.52 16 38 H 0.08 0.12 8.08 -51.93 -0.42 -0.30 16 39 H 0.08 0.12 8.08 -51.93 -0.42 -0.30 16 40 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 41 H 0.13 -0.15 8.06 -52.49 -0.42 -0.58 16 42 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 43 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 44 H 0.12 -0.01 8.06 -52.48 -0.42 -0.44 16 45 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 46 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 47 H 0.15 0.03 8.06 -52.49 -0.42 -0.39 16 LS Contribution 402.83 15.07 6.07 6.07 Total: 0.00 -8.64 402.83 -12.01 -20.64 By element: Atomic # 1 Polarization: -3.29 SS G_CDS: -5.94 Total: -9.23 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: -5.28 Total: -2.23 kcal Atomic # 7 Polarization: -2.46 SS G_CDS: -0.64 Total: -3.09 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -1.17 Total: -5.21 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.08 Total: -6.61 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -8.64 -12.01 -20.64 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12109460_17656566.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.892 kcal (2) G-P(sol) polarization free energy of solvation -8.639 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.644 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.536 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds