Wall clock time and date at job start Mon Mar 8 2021 03:49:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34223 * 116.99931 * 2 1 4 4 O 1.20820 * 120.00103 * 359.97438 * 3 2 1 5 5 C 1.50709 * 119.99791 * 180.02562 * 3 2 1 6 6 H 1.08999 * 112.84842 * 48.79955 * 5 3 2 7 7 C 1.53779 * 113.61012 * 180.02562 * 5 3 2 8 8 C 1.53788 * 87.08021 * 139.98214 * 7 5 3 9 9 H 1.08993 * 113.61375 * 89.19512 * 8 7 5 10 10 N 1.46492 * 113.61070 * 220.01917 * 8 7 5 11 11 C 1.46494 * 120.00507 * 54.27399 * 10 8 7 12 12 C 1.38409 * 119.99773 * 234.27257 * 10 8 7 13 13 N 1.32493 * 119.22015 * 179.97438 * 12 10 8 14 14 C 1.32273 * 120.74402 * 179.97438 * 13 12 10 15 15 C 1.38604 * 119.19606 * 0.02562 * 14 13 12 16 16 C 1.50701 * 120.71925 * 179.97438 * 15 14 13 17 17 O 1.42896 * 109.47162 * 65.00095 * 16 15 14 18 18 Si 1.86303 * 109.46893 * 184.99912 * 16 15 14 19 19 C 1.38608 * 118.56012 * 0.25076 * 15 14 13 20 20 N 1.32282 * 119.19159 * 359.50945 * 19 15 14 21 21 C 1.53784 * 87.16923 * 334.60449 * 8 7 5 22 22 H 1.09002 * 109.47562 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.46769 * 299.99890 * 1 2 3 24 24 H 1.08995 * 109.47609 * 59.99563 * 1 2 3 25 25 H 1.08991 * 113.61990 * 25.43105 * 7 5 3 26 26 H 1.09008 * 113.68976 * 254.53696 * 7 5 3 27 27 H 1.09001 * 109.47212 * 275.10545 * 11 10 8 28 28 H 1.09007 * 109.47157 * 35.10483 * 11 10 8 29 29 H 1.09004 * 109.47894 * 155.10413 * 11 10 8 30 30 H 1.07997 * 120.40347 * 179.97438 * 14 13 12 31 31 H 1.09002 * 109.47152 * 304.99919 * 16 15 14 32 32 H 0.96705 * 113.99702 * 180.02562 * 17 16 15 33 33 H 1.48503 * 109.99735 * 178.67987 * 18 16 15 34 34 H 1.48494 * 110.00006 * 300.00093 * 18 16 15 35 35 H 1.07992 * 120.40343 * 179.72772 * 19 15 14 36 36 H 1.09004 * 113.60919 * 139.93780 * 21 8 7 37 37 H 1.08994 * 113.61522 * 270.84698 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2092 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0233 0.6363 -0.7567 7 6 4.1077 2.7141 0.0001 8 6 5.1815 2.2261 0.9870 9 1 6.0816 1.8491 0.5015 10 7 5.4709 3.1816 2.0590 11 6 4.3837 3.6954 2.8956 12 6 6.7717 3.5990 2.2814 13 7 7.0159 4.4641 3.2548 14 6 8.2476 4.8828 3.4941 15 6 9.2877 4.4059 2.7119 16 6 10.7040 4.8604 2.9541 17 8 11.1358 4.4094 4.2394 18 14 11.8175 4.1497 1.6403 19 6 8.9963 3.5065 1.6984 20 7 7.7430 3.1247 1.5153 21 6 4.1937 1.1210 1.3969 22 1 -0.3634 -1.0276 0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5139 -0.8899 25 1 3.4175 3.4401 0.4297 26 1 4.5106 3.0310 -0.9619 27 1 3.9170 4.5478 2.4019 28 1 3.6409 2.9122 3.0476 29 1 4.7840 4.0086 3.8599 30 1 8.4403 5.5884 4.2887 31 1 10.7476 5.9490 2.9174 32 1 12.0408 4.6668 4.4630 33 1 13.2117 4.6162 1.8494 34 1 11.7669 2.6662 1.6798 35 1 9.7832 3.1193 1.0683 36 1 4.6658 0.1522 1.5604 37 1 3.5270 1.4107 2.2090 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12109656_12175864.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:49:41 Heat of formation + Delta-G solvation = -9.508800 kcal Electronic energy + Delta-G solvation = -21708.854712 eV Core-core repulsion = 18262.253554 eV Total energy + Delta-G solvation = -3446.601158 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.19898 -41.71459 -39.97372 -38.09494 -37.38565 -36.11006 -34.63519 -32.73780 -29.52489 -28.48828 -27.41259 -26.89761 -25.61501 -25.27972 -23.13490 -21.79602 -20.31724 -19.45951 -18.88391 -18.53832 -18.30584 -17.56840 -17.35907 -16.63547 -16.41445 -16.26345 -15.81513 -15.69285 -15.25223 -14.73445 -14.55658 -14.34761 -14.22296 -13.96380 -13.74687 -13.35575 -13.26599 -13.00731 -12.89604 -12.44421 -12.29271 -12.12348 -11.88280 -11.77552 -11.75577 -11.65245 -11.30152 -11.04625 -10.67349 -9.92899 -8.85891 -5.04135 0.11723 0.23143 1.16623 1.20738 1.50056 1.52124 1.84202 1.88570 2.79199 3.13854 3.23090 3.27965 3.33143 3.55956 3.64042 3.69213 3.71883 3.88228 3.98678 4.12641 4.16769 4.24102 4.25488 4.41973 4.46584 4.52731 4.54009 4.59617 4.63001 4.71912 4.84668 4.86841 4.90696 5.13709 5.34529 5.39856 5.78113 5.90074 6.35622 6.44364 6.74886 7.29194 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.503 6.503 5 C -0.107 4.107 6 H 0.132 0.868 7 C -0.132 4.132 8 C 0.140 3.860 9 H 0.135 0.865 10 N -0.572 5.572 11 C 0.094 3.906 12 C 0.568 3.432 13 N -0.566 5.566 14 C 0.224 3.776 15 C -0.247 4.247 16 C -0.054 4.054 17 O -0.538 6.538 18 Si 0.676 3.324 19 C 0.202 3.798 20 N -0.563 5.563 21 C -0.136 4.136 22 H 0.103 0.897 23 H 0.063 0.937 24 H 0.064 0.936 25 H 0.102 0.898 26 H 0.087 0.913 27 H 0.057 0.943 28 H 0.069 0.931 29 H 0.087 0.913 30 H 0.169 0.831 31 H 0.078 0.922 32 H 0.381 0.619 33 H -0.257 1.257 34 H -0.252 1.252 35 H 0.167 0.833 36 H 0.091 0.909 37 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.556 -0.078 -1.656 2.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.391 6.391 5 C -0.127 4.127 6 H 0.150 0.850 7 C -0.171 4.171 8 C 0.035 3.965 9 H 0.153 0.847 10 N -0.286 5.286 11 C -0.049 4.049 12 C 0.213 3.787 13 N -0.288 5.288 14 C 0.056 3.944 15 C -0.255 4.255 16 C -0.165 4.165 17 O -0.345 6.345 18 Si 0.577 3.423 19 C 0.034 3.966 20 N -0.285 5.285 21 C -0.175 4.175 22 H 0.121 0.879 23 H 0.082 0.918 24 H 0.083 0.917 25 H 0.120 0.880 26 H 0.105 0.895 27 H 0.075 0.925 28 H 0.088 0.912 29 H 0.106 0.894 30 H 0.186 0.814 31 H 0.096 0.904 32 H 0.229 0.771 33 H -0.182 1.182 34 H -0.177 1.177 35 H 0.184 0.816 36 H 0.110 0.890 37 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 0.237 -0.900 -1.993 2.200 hybrid contribution 1.113 0.450 1.249 1.732 sum 1.350 -0.450 -0.745 1.606 Atomic orbital electron populations 1.23320 0.75966 1.03997 1.02703 1.86520 1.23697 1.33312 1.83809 1.23484 0.91579 0.81416 0.72111 1.90685 1.66954 1.36438 1.44982 1.22317 0.87625 1.01275 1.01480 0.85035 1.23504 0.97757 0.94669 1.01198 1.22601 0.98209 0.88335 0.87344 0.84705 1.45968 1.02086 1.45713 1.34834 1.21721 0.88731 0.98885 0.95563 1.19311 0.86587 0.86722 0.86084 1.67978 1.23906 1.16462 1.20433 1.22816 0.85608 0.92271 0.93724 1.20596 0.96260 1.05850 1.02802 1.24401 0.96942 1.02102 0.93049 1.86594 1.34911 1.79999 1.33023 0.95253 0.79331 0.81616 0.86091 1.22754 0.92635 0.88691 0.92501 1.67871 1.00417 1.29729 1.30455 1.23511 0.98179 1.00804 0.95000 0.87855 0.91792 0.91721 0.87997 0.89482 0.92470 0.91239 0.89409 0.81427 0.90430 0.77086 1.18216 1.17674 0.81633 0.89016 0.88752 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.50 10.56 -39.24 -0.41 -0.91 16 3 C 0.47 0.85 7.49 36.01 0.27 1.12 16 4 O -0.50 -2.33 15.65 -18.75 -0.29 -2.62 16 5 C -0.11 0.10 4.26 -90.86 -0.39 -0.29 16 6 H 0.13 -0.38 8.14 -51.93 -0.42 -0.80 16 7 C -0.13 0.05 7.00 -25.92 -0.18 -0.13 16 8 C 0.14 -0.03 4.25 -67.12 -0.29 -0.31 16 9 H 0.14 -0.02 7.05 -51.93 -0.37 -0.39 16 10 N -0.57 -0.90 3.19 -175.35 -0.56 -1.46 16 11 C 0.09 0.04 9.57 59.84 0.57 0.61 16 12 C 0.57 1.88 8.18 -322.81 -2.64 -0.76 16 13 N -0.57 -1.93 9.03 -13.93 -0.13 -2.06 16 14 C 0.22 0.40 10.99 -17.23 -0.19 0.21 16 15 C -0.25 -0.23 5.40 -104.35 -0.56 -0.79 16 16 C -0.05 0.06 2.82 36.01 0.10 0.16 16 17 O -0.54 -0.10 12.82 -35.23 -0.45 -0.55 16 18 Si 0.68 -1.28 29.91 -169.99 -5.08 -6.36 16 19 C 0.20 0.24 9.92 -17.22 -0.17 0.07 16 20 N -0.56 -1.57 8.97 -13.93 -0.13 -1.70 16 21 C -0.14 0.16 7.17 -25.83 -0.19 -0.02 16 22 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 23 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 24 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 25 H 0.10 0.12 6.65 -51.93 -0.35 -0.23 16 26 H 0.09 -0.08 8.14 -51.92 -0.42 -0.51 16 27 H 0.06 0.02 7.98 -51.93 -0.41 -0.39 16 28 H 0.07 -0.05 5.85 -51.92 -0.30 -0.36 16 29 H 0.09 0.10 7.17 -51.93 -0.37 -0.27 16 30 H 0.17 -0.06 8.06 -52.49 -0.42 -0.48 16 31 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 32 H 0.38 -1.43 8.74 45.56 0.40 -1.03 16 33 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 34 H -0.25 -0.28 7.07 56.52 0.40 0.12 16 35 H 0.17 -0.21 5.04 -52.49 -0.26 -0.48 16 36 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 37 H 0.09 -0.08 5.91 -51.93 -0.31 -0.38 16 LS Contribution 311.17 15.07 4.69 4.69 Total: 0.00 -8.30 311.17 -9.50 -17.80 By element: Atomic # 1 Polarization: -3.18 SS G_CDS: -4.55 Total: -7.72 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: -2.59 Total: 0.90 kcal Atomic # 7 Polarization: -4.41 SS G_CDS: -0.81 Total: -5.22 kcal Atomic # 8 Polarization: -2.92 SS G_CDS: -1.16 Total: -4.08 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.08 Total: -6.36 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -8.30 -9.50 -17.80 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12109656_12175864.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.288 kcal (2) G-P(sol) polarization free energy of solvation -8.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.797 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds