Wall clock time and date at job start Mon Mar 8 2021 03:49:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34227 * 117.00519 * 2 1 4 4 O 1.20826 * 119.99619 * 359.97438 * 3 2 1 5 5 C 1.50692 * 120.00019 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.85477 * 48.80701 * 5 3 2 7 7 C 1.53789 * 113.61121 * 179.97438 * 5 3 2 8 8 C 1.53783 * 87.08048 * 140.06726 * 7 5 3 9 9 H 1.09003 * 113.61380 * 89.19836 * 8 7 5 10 10 N 1.46502 * 113.61673 * 220.02529 * 8 7 5 11 11 C 1.46492 * 120.00152 * 64.57808 * 10 8 7 12 12 C 1.38615 * 119.99356 * 244.58343 * 10 8 7 13 13 N 1.29691 * 124.94217 * 179.97438 * 12 10 8 14 14 C 1.32127 * 116.86133 * 180.02562 * 13 12 10 15 15 C 1.50692 * 122.70851 * 179.97438 * 14 13 12 16 16 O 1.42907 * 109.47468 * 294.96068 * 15 14 13 17 17 Si 1.86298 * 109.47238 * 54.96176 * 15 14 13 18 18 C 1.33325 * 114.57920 * 0.25627 * 14 13 12 19 19 C 1.50704 * 125.95002 * 179.75161 * 18 14 13 20 20 S 1.70966 * 124.95177 * 0.02562 * 12 10 8 21 21 C 1.53785 * 87.17192 * 334.60912 * 8 7 5 22 22 H 1.09001 * 109.47129 * 300.00173 * 1 2 3 23 23 H 1.08999 * 109.47220 * 59.99812 * 1 2 3 24 24 H 1.08996 * 109.47528 * 180.02562 * 1 2 3 25 25 H 1.09000 * 113.61166 * 25.52350 * 7 5 3 26 26 H 1.09000 * 113.69377 * 254.62499 * 7 5 3 27 27 H 1.09003 * 109.47291 * 275.48946 * 11 10 8 28 28 H 1.08999 * 109.47192 * 35.48876 * 11 10 8 29 29 H 1.09000 * 109.46774 * 155.48823 * 11 10 8 30 30 H 1.09000 * 109.47213 * 174.96221 * 15 14 13 31 31 H 0.96697 * 114.00193 * 179.97438 * 16 15 14 32 32 H 1.48498 * 110.00075 * 299.99931 * 17 15 14 33 33 H 1.48503 * 109.99913 * 61.31807 * 17 15 14 34 34 H 1.08998 * 109.46797 * 84.92692 * 19 18 14 35 35 H 1.08997 * 109.46739 * 204.91828 * 19 18 14 36 36 H 1.08992 * 109.47144 * 324.92470 * 19 18 14 37 37 H 1.09003 * 113.61163 * 139.93821 * 21 8 7 38 38 H 1.09000 * 113.61696 * 270.84001 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2746 -0.0006 6 1 4.0234 0.6363 -0.7567 7 6 4.1078 2.7141 -0.0011 8 6 5.1829 2.2263 0.9844 9 1 6.0824 1.8491 0.4978 10 7 5.4738 3.1821 2.0559 11 6 4.4381 3.5237 3.0340 12 6 6.7291 3.7633 2.1440 13 7 7.0897 4.6187 3.0497 14 6 8.3288 5.0726 2.9826 15 6 8.8852 6.0695 3.9661 16 8 8.1881 7.3099 3.8331 17 14 8.6704 5.4191 5.6985 18 6 9.0452 4.5817 1.9709 19 6 10.4772 4.9262 1.6518 20 16 8.0271 3.4580 1.0740 21 6 4.1956 1.1214 1.3961 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 3.4181 3.4401 0.4293 26 1 4.5094 3.0306 -0.9638 27 1 3.8054 4.3150 2.6319 28 1 3.8304 2.6431 3.2421 29 1 4.9079 3.8671 3.9556 30 1 9.9452 6.2252 3.7653 31 1 8.4943 7.9999 4.4374 32 1 7.2294 5.2026 5.9847 33 1 9.4170 4.1455 5.8591 34 1 11.1426 4.2978 2.2438 35 1 10.6642 4.7556 0.5916 36 1 10.6603 5.9741 1.8891 37 1 4.6679 0.1526 1.5592 38 1 3.5300 1.4112 2.2091 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_12109656_15704122.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 03:49:47 Heat of formation + Delta-G solvation = -25.076037 kcal Electronic energy + Delta-G solvation = -22222.428621 eV Core-core repulsion = 18774.192955 eV Total energy + Delta-G solvation = -3448.235666 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.102 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.04499 -41.00159 -40.09219 -37.66522 -37.34150 -36.06369 -33.14701 -29.66873 -29.39319 -28.44653 -27.15386 -26.69012 -25.62392 -23.76236 -21.99589 -20.61710 -19.75579 -19.64385 -18.70666 -18.29828 -17.88788 -17.48655 -17.30924 -16.45821 -16.35239 -15.87523 -15.60922 -15.30013 -14.86250 -14.57792 -14.32764 -14.14849 -14.06078 -13.94690 -13.65423 -13.56375 -13.37429 -13.11099 -12.91050 -12.86738 -12.69810 -12.36939 -12.04341 -11.96528 -11.83684 -11.73758 -11.41121 -10.85120 -10.49563 -10.27977 -9.95601 -8.50502 -4.91905 -0.00244 0.15917 0.75317 1.08008 1.34867 1.49021 1.76288 1.85194 1.96293 2.28432 2.96912 3.11679 3.34290 3.41602 3.48800 3.67779 3.85166 4.02079 4.07030 4.11705 4.13845 4.19484 4.19705 4.32185 4.37891 4.41668 4.49806 4.55403 4.60001 4.62207 4.70073 4.78479 4.88802 4.92176 5.02326 5.18412 5.32361 5.66133 5.98308 6.66950 6.70089 6.99266 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.501 6.501 5 C -0.108 4.108 6 H 0.133 0.867 7 C -0.133 4.133 8 C 0.131 3.869 9 H 0.116 0.884 10 N -0.571 5.571 11 C 0.095 3.905 12 C 0.316 3.684 13 N -0.531 5.531 14 C 0.114 3.886 15 C -0.034 4.034 16 O -0.539 6.539 17 Si 0.701 3.299 18 C -0.248 4.248 19 C -0.070 4.070 20 S 0.102 5.898 21 C -0.131 4.131 22 H 0.064 0.936 23 H 0.065 0.935 24 H 0.104 0.896 25 H 0.106 0.894 26 H 0.089 0.911 27 H 0.057 0.943 28 H 0.071 0.929 29 H 0.083 0.917 30 H 0.078 0.922 31 H 0.382 0.618 32 H -0.246 1.246 33 H -0.265 1.265 34 H 0.073 0.927 35 H 0.070 0.930 36 H 0.080 0.920 37 H 0.095 0.905 38 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.673 -2.101 0.391 3.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.388 6.388 5 C -0.127 4.127 6 H 0.151 0.849 7 C -0.172 4.172 8 C 0.026 3.974 9 H 0.134 0.866 10 N -0.289 5.289 11 C -0.049 4.049 12 C -0.054 4.054 13 N -0.256 5.256 14 C -0.016 4.016 15 C -0.146 4.146 16 O -0.344 6.344 17 Si 0.601 3.399 18 C -0.371 4.371 19 C -0.129 4.129 20 S 0.353 5.647 21 C -0.169 4.169 22 H 0.083 0.917 23 H 0.083 0.917 24 H 0.122 0.878 25 H 0.125 0.875 26 H 0.107 0.893 27 H 0.076 0.924 28 H 0.090 0.910 29 H 0.101 0.899 30 H 0.096 0.904 31 H 0.229 0.771 32 H -0.170 1.170 33 H -0.190 1.190 34 H 0.092 0.908 35 H 0.089 0.911 36 H 0.099 0.901 37 H 0.114 0.886 38 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 1.416 -3.353 -0.052 3.640 hybrid contribution -0.101 0.398 -0.136 0.432 sum 1.315 -2.956 -0.189 3.241 Atomic orbital electron populations 1.23334 0.75812 1.04066 1.02768 1.86512 1.23810 1.33192 1.83794 1.23381 0.91443 0.81501 0.72285 1.90701 1.66882 1.36422 1.44776 1.22310 0.88029 1.01103 1.01268 0.84918 1.23551 0.97641 0.94970 1.01019 1.22613 0.97848 0.89087 0.87823 0.86633 1.45767 1.07334 1.44842 1.30993 1.21746 0.90245 1.00585 0.92289 1.23333 0.91881 0.95427 0.94732 1.66087 1.16989 1.15729 1.26834 1.18958 0.88091 0.99047 0.95478 1.24237 0.96531 0.86807 1.07057 1.86538 1.62455 1.21204 1.64233 0.96130 0.82402 0.84207 0.77189 1.25112 1.03154 1.07198 1.01626 1.20188 0.88163 1.02347 1.02245 1.83792 1.03652 1.45160 1.32073 1.23479 0.97800 1.00149 0.95520 0.91741 0.91671 0.87780 0.87520 0.89265 0.92439 0.91046 0.89853 0.90376 0.77076 1.17037 1.18969 0.90818 0.91108 0.90124 0.88605 0.88040 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.36 10.56 -39.25 -0.41 -0.78 16 3 C 0.47 0.69 7.49 36.00 0.27 0.96 16 4 O -0.50 -2.25 15.65 -18.75 -0.29 -2.55 16 5 C -0.11 0.16 4.26 -90.87 -0.39 -0.23 16 6 H 0.13 -0.49 8.14 -51.93 -0.42 -0.91 16 7 C -0.13 0.08 7.06 -25.91 -0.18 -0.10 16 8 C 0.13 -0.11 4.17 -67.11 -0.28 -0.39 16 9 H 0.12 -0.22 6.83 -51.93 -0.35 -0.57 16 10 N -0.57 -1.08 3.18 -175.33 -0.56 -1.64 16 11 C 0.10 0.14 9.99 59.84 0.60 0.73 16 12 C 0.32 1.27 7.74 -87.67 -0.68 0.59 16 13 N -0.53 -3.20 8.95 -11.36 -0.10 -3.30 16 14 C 0.11 0.53 5.19 -84.18 -0.44 0.10 16 15 C -0.03 -0.06 2.84 36.00 0.10 0.04 16 16 O -0.54 -1.18 12.86 -35.23 -0.45 -1.64 16 17 Si 0.70 0.80 32.65 -169.99 -5.55 -4.76 16 18 C -0.25 -0.76 6.57 -36.02 -0.24 -0.99 16 19 C -0.07 0.00 9.72 36.01 0.35 0.35 16 20 S 0.10 0.22 21.58 -107.50 -2.32 -2.10 16 21 C -0.13 0.26 7.06 -25.83 -0.18 0.08 16 22 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 24 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 25 H 0.11 0.14 7.16 -51.93 -0.37 -0.23 16 26 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 28 H 0.07 -0.04 5.61 -51.93 -0.29 -0.33 16 29 H 0.08 0.26 7.46 -51.93 -0.39 -0.13 16 30 H 0.08 -0.06 6.30 -51.93 -0.33 -0.39 16 31 H 0.38 -1.31 8.74 45.56 0.40 -0.91 16 32 H -0.25 -1.31 7.11 56.52 0.40 -0.91 16 33 H -0.26 -1.02 7.11 56.52 0.40 -0.61 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.08 -0.07 7.15 -51.93 -0.37 -0.44 16 37 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.10 -0.15 5.65 -51.93 -0.29 -0.45 16 LS Contribution 330.49 15.07 4.98 4.98 Total: 0.00 -10.02 330.49 -9.71 -19.73 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -5.00 Total: -10.14 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: 0.00 Total: 2.18 kcal Atomic # 7 Polarization: -4.27 SS G_CDS: -0.66 Total: -4.93 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -1.16 Total: -4.96 kcal Atomic # 14 Polarization: 0.80 SS G_CDS: -5.55 Total: -4.76 kcal Atomic # 16 Polarization: 0.22 SS G_CDS: -2.32 Total: -2.10 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -10.02 -9.71 -19.73 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_12109656_15704122.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.343 kcal (2) G-P(sol) polarization free energy of solvation -10.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.710 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.733 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.076 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds